HG10009331 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009331
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	stress-induced protein KIN2-like
Location	Chr06: 4818845 .. 4819218 (-)
RNA-Seq Expression	HG10009331
Synteny	HG10009331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAACTCTCGAAAGATGAGCTACCACATCGGAGAAGCTAAAGGTCAAGCACAGGTTGATCACTTTTATTGTCGTTGTTATTTATATTTAGCTACGTCATTGTTTTATTAAACGGTTTAATTTTAAAAGTTTACGTTCTTTTAATATAATGGAATTAGTGGTTTGGATTGGATTTACAATATGGTAGTCTTCTTGATAATATATTGATTTGTGTGATTATGTAGGAGAAGGCAAGTGATCTAATGGACAAGGCAGGTGATGTAGCCCAATCAGCCAAGGAGTCAATGCAAGAGGCAGGACAACAAATAAAGGCTAAGGCACAGGGTGCAGCTGATGCTGTCAAGGATGCCACAGGGATGAACAAATAA

mRNA sequence

ATGGCAGACAACTCTCGAAAGATGAGCTACCACATCGGAGAAGCTAAAGGTCAAGCACAGGAGAAGGCAAGTGATCTAATGGACAAGGCAGGTGATGTAGCCCAATCAGCCAAGGAGTCAATGCAAGAGGCAGGACAACAAATAAAGGCTAAGGCACAGGGTGCAGCTGATGCTGTCAAGGATGCCACAGGGATGAACAAATAA

Coding sequence (CDS)

ATGGCAGACAACTCTCGAAAGATGAGCTACCACATCGGAGAAGCTAAAGGTCAAGCACAGGAGAAGGCAAGTGATCTAATGGACAAGGCAGGTGATGTAGCCCAATCAGCCAAGGAGTCAATGCAAGAGGCAGGACAACAAATAAAGGCTAAGGCACAGGGTGCAGCTGATGCTGTCAAGGATGCCACAGGGATGAACAAATAA

Protein sequence

MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVKDATGMNK

Homology

[Close]

BLAST of HG10009331 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS KMSYHIGEAKGQAQEKAS+LMDKAGD AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 8.5e-22
Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH+GEAKGQAQEKAS++MDKA D AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 110.9 bits (276), Expect = 4.2e-21
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH GEAKGQAQEKAS++MDKA D AQSAKESMQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 110.9 bits (276), Expect = 4.2e-21
Identity = 59/67 (88.06%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH GEAKGQAQEKAS++MDKA D AQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. NCBI nr
Match: XP_022134237.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 3.6e-20
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KM+Y+ GEAKG+AQEKAS+LMDKA D AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMAYNAGEAKGEAQEKASNLMDKASDTAQSAKESMQEAGQQLKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-23
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS KMSYHIGEAKGQAQEKAS+LMDKAGD AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-22
Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH+GEAKGQAQEKAS++MDKA D AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. ExPASy TrEMBL
Match: A0A1S3ASP1 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.1e-22
Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH+GEAKGQAQEKAS++MDKA D AQSAKESMQEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 59/67 (88.06%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH GEAKGQAQEKAS++MDKA D AQSAKES+QEAGQQ+KAKAQGAADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          MADNS+KMSYH GEAKGQAQEKAS++MDKA D AQSAKESMQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DATGMNK 68
          DATGMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009331 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          M+ NS+ +S+  G+AKGQ QEKAS +MDKA + AQSAKES++E GQQIK KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMNK 68
          +ATGMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of HG10009331 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 80.9 bits (198), Expect = 4.4e-16
Identity = 41/67 (61.19%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MADNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVK 60
          M++NS+ MS++ G+AKGQ QEKAS+L+DKA + AQSAKES+QE GQQ+K KAQGA++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMNK 68
          + TG++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of HG10009331 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-14
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 3  DNSRKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVKDA 62
          DN +  SY  G+A GQ +EKA  +MDKA D A SA++S+Q+ GQQ+K KAQGAAD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMNK 68
          TGMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of HG10009331 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 6  RKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVKDAT 64
          ++ SY  GE +G+AQEK  + M   GD  Q+AK+  QE  Q  + KA   A + KD T
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKT 62

[Close]

BLAST of HG10009331 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 6  RKMSYHIGEAKGQAQEKASDLMDKAGDVAQSAKESMQEAGQQIKAKAQGAADAVKDAT 64
          ++ SY  GE +G+AQEK  + M   GD  Q+AK+  QE  Q  + KA   A + KD T
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKT 62

The following BLAST results are available for this feature:

BLAST of HG10009331 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152387.1	1.0e-22	94.03	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]
XP_008437025.1	8.5e-22	89.55	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]
XP_022159716.1	4.2e-21	88.06	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159706.1	4.2e-21	88.06	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022134237.1	3.6e-20	86.57	stress-induced protein KIN2-like [Momordica charantia]	[more]

BLAST of HG10009331 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10009331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRE1	4.9e-23	94.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]
A0A5A7TJP0	4.1e-22	89.55	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ASP1	4.1e-22	89.55	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103482578 PE=4 SV...	[more]
A0A6J1E4Q8	2.0e-21	88.06	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6J1E4S0	2.0e-21	88.06	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]

BLAST of HG10009331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	6.7e-17	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	4.4e-16	61.19	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.8e-14	61.54	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.1	1.7e-04	41.38	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.2	1.7e-04	41.38	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 2..65 e-value: 3.3E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009331.1	HG10009331.1	mRNA