HG10009330 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009330
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	stress-induced protein KIN2-like
Location	Chr06: 4815676 .. 4816087 (-)
RNA-Seq Expression	HG10009330
Synteny	HG10009330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAACTCTCAAACGATGAGCTATCAGATCGGAGAAGCCAAAGGCCAAGCACAGGTTCACTTTTATTGTGATCACTTTTAATTATATTATTTAGCTACGTTATGGTTTTATTAAACAATTTAATTTCACTCTAATGGAATTACTAGTTTGAATAATTGGATATACAATATGGTAGTCTTCTTGAATACTCGATATTTATTTGGTCTTCCAAGATTATATTAAGGAGTGAATTGGTAATATACTTATTTGTGTGATTATGTAGGAGAAGGCAAGCAATCTAATGGACAAGGCAGGTGATGCAGCCCAATCAGCCAAGGAGTCAGTGCAAGAGGCAGGACAACAGATAAAGGCTAAGGCACAGGGCACAGCTGATGCTGTCAAGGATGCCATGGGGATGAACAAATAA

mRNA sequence

ATGGCAGACAACTCTCAAACGATGAGCTATCAGATCGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCAAGCAATCTAATGGACAAGGCAGGTGATGCAGCCCAATCAGCCAAGGAGTCAGTGCAAGAGGCAGGACAACAGATAAAGGCTAAGGCACAGGGCACAGCTGATGCTGTCAAGGATGCCATGGGGATGAACAAATAA

Coding sequence (CDS)

ATGGCAGACAACTCTCAAACGATGAGCTATCAGATCGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCAAGCAATCTAATGGACAAGGCAGGTGATGCAGCCCAATCAGCCAAGGAGTCAGTGCAAGAGGCAGGACAACAGATAAAGGCTAAGGCACAGGGCACAGCTGATGCTGTCAAGGATGCCATGGGGATGAACAAATAA

Protein sequence

MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKDAMGMNK

Homology

[Close]

BLAST of HG10009330 vs. NCBI nr
Match: XP_004152387.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein Csa_000602 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNS+ MSY IGEAKGQAQEKASNLMDKAGD AQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. NCBI nr
Match: XP_004152386.1 (stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein Csa_000676 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 8.0e-20
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSYQIGEAKGQAQEKASN+M+KA DAAQSAKES+QE GQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. NCBI nr
Match: XP_022159706.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 8.0e-20
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY  GEAKGQAQEKASN+MDKA DAAQSAKESVQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY  GEAKGQAQEKASN+MDKA DAAQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. NCBI nr
Match: XP_008437025.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 3.0e-19
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY +GEAKGQAQEKASN+MDKA D AQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. ExPASy Swiss-Prot
Match: P31169 (Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.5e-05
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 9  SYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKDAMGMNK 68
          ++Q G+A G+A+EK++ L+DKA DAA +A  S Q+AG+ I   A G  + VKD  G+NK
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

[Close]

BLAST of HG10009330 vs. ExPASy Swiss-Prot
Match: P18612 (Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 9  SYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKDAMGMNK 68
          ++Q G+  G+A+EK++ L+DKA DAA  A    Q+AG+ +   A G  + VKD  G+NK
Sbjct: 8  AFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTGLNK 66

[Close]

BLAST of HG10009330 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-04
Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 6  QTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKD 62
          Q  SY+ GE +G+AQEK    M   GD  Q+AK+  QE  Q  + KA  TA + KD
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

[Close]

BLAST of HG10009330 vs. ExPASy TrEMBL
Match: A0A0A0KRE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.0e-20
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNS+ MSY IGEAKGQAQEKASNLMDKAGD AQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. ExPASy TrEMBL
Match: A0A0A0KPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSYQIGEAKGQAQEKASN+M+KA DAAQSAKES+QE GQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQNMSYQIGEAKGQAQEKASNMMEKASDAAQSAKESIQEGGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.9e-20
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY  GEAKGQAQEKASN+MDKA DAAQSAKESVQEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.6e-20
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY  GEAKGQAQEKASN+MDKA DAAQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. ExPASy TrEMBL
Match: A0A5A7TJP0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00300 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          MADNSQ MSY +GEAKGQAQEKASN+MDKA D AQSAKES+QEAGQQ+KAKAQG ADAVK
Sbjct: 1  MADNSQKMSYHVGEAKGQAQEKASNMMDKASDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 DAMGMNK 68
          DA GMNK
Sbjct: 61 DATGMNK 67

[Close]

BLAST of HG10009330 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 83.6 bits (205), Expect = 6.7e-17
Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          M+ NSQ +S+Q G+AKGQ QEKAS +MDKA +AAQSAKES++E GQQIK KAQG  ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DAMGMNK 68
          +A GMNK
Sbjct: 61 NATGMNK 67

[Close]

BLAST of HG10009330 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 42/67 (62.69%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVK 60
          M++NSQ+MS+  G+AKGQ QEKASNL+DKA +AAQSAKES+QE GQQ+K KAQG ++ +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DAMGMNK 68
          +  G++K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of HG10009330 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-14
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 3  DNSQTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKDA 62
          DN Q  SYQ G+A GQ +EKA  +MDKA DAA SA++S+Q+ GQQ+K KAQG AD VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 MGMNK 68
           GMNK
Sbjct: 62 TGMNK 66

[Close]

BLAST of HG10009330 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 47.4 bits (111), Expect = 5.4e-06
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 9  SYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKDAMGMNK 68
          ++Q G+A G+A+EK++ L+DKA DAA +A  S Q+AG+ I   A G  + VKD  G+NK
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

[Close]

BLAST of HG10009330 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 5.9e-05
Identity = 25/56 (44.64%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 6  QTMSYQIGEAKGQAQEKASNLMDKAGDAAQSAKESVQEAGQQIKAKAQGTADAVKD 62
          Q  SY+ GE +G+AQEK    M   GD  Q+AK+  QE  Q  + KA  TA + KD
Sbjct: 5  QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

The following BLAST results are available for this feature:

BLAST of HG10009330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152387.1	6.1e-20	88.06	stress-induced protein KIN2 [Cucumis sativus] >KGN50291.1 hypothetical protein C...	[more]
XP_004152386.1	8.0e-20	86.57	stress-induced protein KIN2 [Cucumis sativus] >KGN50292.1 hypothetical protein C...	[more]
XP_022159706.1	8.0e-20	88.06	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_022159716.1	1.8e-19	86.57	stress-induced protein KIN2-like [Momordica charantia]	[more]
XP_008437025.1	3.0e-19	85.07	PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0043490.1 stress-...	[more]

BLAST of HG10009330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31169	7.5e-05	47.46	Stress-induced protein KIN2 OS=Arabidopsis thaliana OX=3702 GN=KIN2 PE=2 SV=1	[more]
P18612	8.3e-04	42.37	Stress-induced protein KIN1 OS=Arabidopsis thaliana OX=3702 GN=KIN1 PE=2 SV=1	[more]
Q96270	8.3e-04	44.64	Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE...	[more]

BLAST of HG10009330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRE1	3.0e-20	88.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165860 PE=4 SV=1	[more]
A0A0A0KPD4	3.9e-20	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G165870 PE=4 SV=1	[more]
A0A6J1E4Q8	3.9e-20	88.06	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6J1E4S0	8.6e-20	86.57	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ...	[more]
A0A5A7TJP0	1.5e-19	85.07	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]

BLAST of HG10009330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	6.7e-17	67.16	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	2.6e-16	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.8e-14	63.08	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	5.4e-06	47.46	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]
AT1G52690.1	5.9e-05	44.64	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1430		coord: 6..66 e-value: 1.4E-8 score: 36.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF23	STRESS-INDUCED PROTEIN KIN1-RELATED	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009330.1	HG10009330.1	mRNA