HG10009311 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009311
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Altered inheritance of mitochondria protein 24, mitochondrial
Location	Chr06: 4653260 .. 4656409 (-)
RNA-Seq Expression	HG10009311
Synteny	HG10009311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTACTACAGGTATATAATATATTGTTATTGTTATTGTTATTGTTATTTTGTGTCACATAGTGGGATAATGGTTAACTTCTTTCATATTTATTGTCTCTCTTCAAGTACTATCTCTCTTAGTTTTCTTGTTCATCCTACATTGGCAGATTATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGTAATTAGTTCTAGGATTCATTTTTTCTCTTGCTTTCTATCTCTTCATAGGAAAACATTTTTGAGCTTTTAGAATTTTGTTTTTATTTCTTATAATGCTTCCCTTAGGTCAAGTTTATGTTTAACGTGTTTGGGATATTGACCTCAATGTGCCTCCAACACTTGTTCAACATGTTCTTAATTTGTACACAATATTGACACTATCTGGACACCCTTGTATATAATGATTTTTTCTAAATAATTGGTACTTTTAATTTGTGAATAGTCCGTGGTTCAAGTTCTCTCCCCACAGTGTTGGTCAATAGACATGGGCACCAGAATCTAGATATACAGAGCGTTGCCAACTTGATGATTTGTTAATGCTATTTATCTGCTGTTTGGCTGTTTCAACTGTAATTATTATTAATGTTCATGTGAAACTAGCAATGATAGTCCTGAAAATTTTCTTATTTCAAAAAGTTTTGTTTATGAGAATTGAGGTTTCCTTATAGTTCATCTACTTTTTCTTAATTGGGGAAAGACTCTCTTGTTTCTTTGTTACCTACAACTGTTCGTGCAACTGACACACTTATTGTTGCAGGCTCAATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCACTGGCTATTTGGCAAGAGTGTCACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAATTGCTGCACCTTCTCTTGCCAGGATCCTTCCGGTTTGTGCTGTGTTTGTTGTCCTTTATTATTATAATTTAAAAAAAAAAAATTGAAAAAGGTTTAATCAATCGACTTTAGCTTCAATGTAGGTCATTCTAGTTTATCCTCAATTTTTTATATGTTTCTCTAACTATGTTGACAGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGGTAGAGAATATTGTTTACTTTGTTGTTTGCCTGGTAGCTTCTCTTTGTTGCTCTTCTTAATAACTGATTTATCGCTGTGCCCCCCCCCCCCCCCCCCCCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCATCATCATCATCATGGTGTTTGCAAGAAATTAAATTTATATGTTTAACAGATTGAAATTTTAGATATCTTGAATTTAGTTATTCAATTTGTCTTCTTTTGGGCTCCATTGCCTGATAATTTTTGCTTCATTTTTTTATACGTAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAATTGATCACAGAGTACGCAATGTTGTTTCAGGCGTGGAGGTGAGCTGATTTATTATTCCTTATTGTTGGCTAAACTGCTCCATGCATCCGTGCTTTCTAGTATTCAGTTTTGCTCTTCCTAATGTTGTTTACTATTCTTCTCTCTTGCTACTCTGGATCTTACTATAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTTGCCTTTATCCTTGGGGGTGGATCTGGTATGTGCTTCTCACTTTTCTTTTTTATTTTAGCATATTCTCCAAAGGACTGTTTATATCTGTTATGCAATCATGAAAACGGAAAACAAGCCTGTCCTTTGAGTTTTCATGTGACCTCAACCTGTTGGCTTGAGCAACTCAAGTGTTCGTTTTGTTATTAAGATTTATTTCCATGCTTGTAATGGGGTGAATCACAACTGACCTTGAACTGTACCGAGACAGGTGCTTTTATGCTAATATATAAGGTTGGAATTAGATTTTAATCACGCTTCAAGTAGATGGACTAATTTCTGCAATACTAATCTAAAGGCTGATTTTGTTTTTCCTTCAGAGATTTATGGTTCATAATTTACTAAGTATGATATATATAAATTATAATGGCCAGAAGGATAGGGAGTTCGCATTTTTAAAATATTTTAATGTTCATGATGGAATACACTTCATGCTTCAGCCTTTAGACAGTTCAAGATTAGCATTCTTTCCATTTGAAGAAAAAGCTTTCTGTTTCTAGAATAAATAATGTATAATATCAGTCATCTGATTATGATTTTTTTTTTGGGTTCGGCTAGTTGTACAGAAAAATCTAGATGTCGGTGAAGTTCTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCTCCATTGATGTCCAAATCAAATACAATGGCCCTGTGAGAAGAGCAGTATTTGGAGTAAGAGTTCTTTATTTTTATGGAGTTTGCTTTTCGCGTTCCATGTCGTCTCTTTGTTGGCCGTGCAATACTTTGATTTCTGGGCTATTATCTACACAAAAGCCAAACGAATATAGTATAGGTTACATTTTACTTGAAATAAAGATTACATGTGAAACACACACCGAGTTTTTATTAGATGATGACAGTAGAAGCTATACTTCTTGTAAATATAGTCCATTCTTACTCGGGGCTTCTCTCGGGTGGATATCTTATTCGATCTTCTGTCGTCTTTCCATTCCTAAAGAAATTATAAAATAGCAGAGCCAAGGTTCAGTAGAAGAAAATTCAGTCCCACAATTTCGAACTCTCCTCGTTCTCGAGCTTTAACAAGACATTCATTCTGTTTATTTATATGAAACACATGTTTGTCATGTTTTAAGAGGCCATCCCATGATTGTGAAATTGCAGGGTGAAAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATCGCTAGGTAAGTAATTCTTTTAAGCTGTGGAAGGTGTTGGTTTCTGTTTTTGGCTTAAAACTTATTGGACAAAGCATCAAATTTTGGTTGCAGGGCCGTTACATCCCCAAACATGAGGGAAAATCCGAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGA

mRNA sequence

ATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTACTACAGATTATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGCTCAATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCACTGGCTATTTGGCAAGAGTGTCACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAATTGCTGCACCTTCTCTTGCCAGGATCCTTCCGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAATTGATCACAGAGTACGCAATGTTGTTTCAGGCGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTTGCCTTTATCCTTGGGGGTGGATCTGTTGTACAGAAAAATCTAGATGTCGGTGAAGTTCTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCTCCATTGATGTCCAAATCAAATACAATGGCCCTGTGAGAAGAGCAGTATTTGGAGGTGAAAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATCGCTAGGGCCGTTACATCCCCAAACATGAGGGAAAATCCGAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGA

Coding sequence (CDS)

ATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAAGTACTACAGATTATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGCTCAATGTGCTTCATGTCTGGGTCTATTGAGATGGAAAATGTTTTTCTCCCGGAAAATGAAGTGGGTGTTTGGCACTGGCTATTTGGCAAGAGTGTCACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGATGGATATGTTGGAATTGCTGCACCTTCTCTTGCCAGGATCCTTCCGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAGGTTAACAACACAATTGATCACAGAGTACGCAATGTTGTTTCAGGCGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGGCTTGCCTTTATCCTTGGGGGTGGATCTGTTGTACAGAAAAATCTAGATGTCGGTGAAGTTCTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCTCCATTGATGTCCAAATCAAATACAATGGCCCTGTGAGAAGAGCAGTATTTGGAGGTGAAAACTTAGTGACAGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCTCAGCGTATCGCTAGGGCCGTTACATCCCCAAACATGAGGGAAAATCCGAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGA

Protein sequence

MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQIKYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV

Homology

[Close]

BLAST of HG10009311 vs. NCBI nr
Match: KAA0039731.1 (Mitochondrial biogenesis protein AIM24 [Cucumis melo var. makuwa])

HSP 1 Score: 501.9 bits (1291), Expect = 3.3e-138
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVL+NSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 61  VTSIVLQNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEV+AVDISCIVAMTTSIDVQI
Sbjct: 121 RVRNVVPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVIAVDISCIVAMTTSIDVQI 180

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 241 ALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of HG10009311 vs. NCBI nr
Match: XP_008437053.1 (PREDICTED: uncharacterized protein LOC103482594 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 3.3e-138
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVL+NSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLQNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEV+AVDISCIVAMTTSIDVQI
Sbjct: 142 RVRNVVPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVIAVDISCIVAMTTSIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. NCBI nr
Match: XP_038906609.1 (uncharacterized protein LOC120092560 isoform X1 [Benincasa hispida])

HSP 1 Score: 500.7 bits (1288), Expect = 7.4e-138
Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVLRNSG SDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLRNSGASDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNV+ GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEVL+VDISCIVAMTTSIDVQI
Sbjct: 142 RVRNVIPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLSVDISCIVAMTTSIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. NCBI nr
Match: XP_023551647.1 (uncharacterized protein LOC111809421 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.4 bits (1287), Expect = 9.6e-138
Identity = 254/260 (97.69%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQV+QIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 1   MIPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVLRN+GTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 61  VTSIVLRNAGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV+GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEVLAVDISCIVAMTT+IDVQI
Sbjct: 121 RVRNVVTGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLAVDISCIVAMTTTIDVQI 180

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGG+NLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 181 KYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 241 ALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of HG10009311 vs. NCBI nr
Match: XP_023551646.1 (uncharacterized protein LOC111809421 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.4 bits (1287), Expect = 9.6e-138
Identity = 254/260 (97.69%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQV+QIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVLRN+GTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLRNAGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV+GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEVLAVDISCIVAMTT+IDVQI
Sbjct: 142 RVRNVVTGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLAVDISCIVAMTTTIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGG+NLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. ExPASy TrEMBL
Match: A0A5A7TDK4 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00630 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.6e-138
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVL+NSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 61  VTSIVLQNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEV+AVDISCIVAMTTSIDVQI
Sbjct: 121 RVRNVVPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVIAVDISCIVAMTTSIDVQI 180

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 241 ALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of HG10009311 vs. ExPASy TrEMBL
Match: A0A1S3AT84 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482594 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.6e-138
Identity = 256/260 (98.46%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVL+NSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLQNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEV+AVDISCIVAMTTSIDVQI
Sbjct: 142 RVRNVVPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVIAVDISCIVAMTTSIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. ExPASy TrEMBL
Match: A0A0A0KKX3 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G165180 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.7e-138
Identity = 255/260 (98.08%), Postives = 259/260 (99.62%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVL+NSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLQNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEV+AVDISCIVAMTTSIDVQI
Sbjct: 142 RVRNVVPGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVIAVDISCIVAMTTSIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGGENLVTATLTGPG+VFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGENLVTATLTGPGIVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. ExPASy TrEMBL
Match: A0A6J1E2Y5 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430310 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.7e-138
Identity = 254/260 (97.69%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQV+QIMLKPQEKVIARPGSMCFMSG+IEMENVFLPENEVGVWHWLFGKS
Sbjct: 1   MIPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGNIEMENVFLPENEVGVWHWLFGKS 60

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV+GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEVLAVDISCIVAMTT+IDVQI
Sbjct: 121 RVRNVVTGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLAVDISCIVAMTTTIDVQI 180

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGG+NLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 181 KYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 241 ALFFFLAYVVIVSSIILTDV 260

[Close]

BLAST of HG10009311 vs. ExPASy TrEMBL
Match: A0A6J1E653 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430310 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.7e-138
Identity = 254/260 (97.69%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MIPFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKS 60
           MIPFQILGGEAQV+QIMLKPQEKVIARPGSMCFMSG+IEMENVFLPENEVGVWHWLFGKS
Sbjct: 22  MIPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGNIEMENVFLPENEVGVWHWLFGKS 81

Query: 61  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 120
           VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH
Sbjct: 82  VTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDH 141

Query: 121 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 180
           RVRNVV+GVEGFLRQKLSGQGLAFILGGGSVVQKNL+VGEVLAVDISCIVAMTT+IDVQI
Sbjct: 142 RVRNVVTGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLAVDISCIVAMTTTIDVQI 201

Query: 181 KYNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 240
           KYNGPVRRAVFGG+NLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL
Sbjct: 202 KYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQL 261

Query: 241 ALFFFLAYVVIVSSIILTDV 261
           ALFFFLAYVVIVSSIILTDV
Sbjct: 262 ALFFFLAYVVIVSSIILTDV 281

[Close]

BLAST of HG10009311 vs. TAIR 10
Match: AT4G17420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 397.9 bits (1021), Expect = 6.3e-111
Identity = 200/262 (76.34%), Postives = 234/262 (89.31%), Query Frame = 0


Query: 3   PFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVT 62
           PFQILGGEAQV+QIMLKPQEKVIA+PGSMC+MSGSIEM+N + PE EVGV  W+ GKSV+
Sbjct: 24  PFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVS 83

Query: 63  SIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTI--DH 122
           SIVLRN+G +DG+VGIAAPSLARILP+D+AMFGG++LCQPDAFLCSV+DVKV NT+   H
Sbjct: 84  SIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRH 143

Query: 123 RVRNV-VSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQ 182
           R RN+  +G EG LRQ+LSGQGLAFI+ GGSVVQKNL+VGEVL +D+SCI A+T SI+ Q
Sbjct: 144 RARNIAAAGAEGVLRQRLSGQGLAFIIAGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQ 203

Query: 183 IKYN-GPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFV 242
           IKYN  PVRRAVFGG+N+VTATLTGPG+VFIQSLPF RLSQRIAR+VTSPNMRENP+  V
Sbjct: 204 IKYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHRLSQRIARSVTSPNMRENPRLLV 263

Query: 243 QLALFFFLAYVVIVSSIILTDV 261
           Q+ LF FLAYVVIVSS+ILT++
Sbjct: 264 QIGLFIFLAYVVIVSSLILTEM 285

[Close]

BLAST of HG10009311 vs. TAIR 10
Match: AT5G47420.1 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 392.1 bits (1006), Expect = 3.4e-109
Identity = 193/259 (74.52%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 3   PFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVT 62
           PFQILGGE+QV+QIMLK +EKVIA+P SMC+MSGSIEMEN + PE EVGV  W+ GKSV+
Sbjct: 24  PFQILGGESQVVQIMLKSEEKVIAKPASMCYMSGSIEMENTYTPEQEVGVLQWILGKSVS 83

Query: 63  SIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRV 122
           S+VLRN+G +DG+VGIAAP LARILPID+AMFGGE+LCQPDAFLCSV+DVKV N++D R 
Sbjct: 84  SVVLRNTGQNDGFVGIAAPYLARILPIDLAMFGGEILCQPDAFLCSVHDVKVVNSVDQRA 143

Query: 123 RNVV-SGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQIK 182
           RN+V +G EGFLRQ+LSGQGLAFIL GGSVVQK L+VGEV ++D+SCI A+T SIDV+IK
Sbjct: 144 RNIVAAGAEGFLRQRLSGQGLAFILAGGSVVQKVLEVGEVFSIDVSCIAALTPSIDVRIK 203

Query: 183 YNGPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQLA 242
            N P RRA+FGG+N+V ATLTGPG+VFIQSLPF RLSQRIAR+VTSPNMRENPK  +Q+A
Sbjct: 204 NNAPFRRALFGGDNVVMATLTGPGIVFIQSLPFHRLSQRIARSVTSPNMRENPKLLIQIA 263

Query: 243 LFFFLAYVVIVSSIILTDV 261
           +F FLAY VI+SS+ILT+V
Sbjct: 264 IFAFLAYAVILSSLILTEV 282

[Close]

BLAST of HG10009311 vs. TAIR 10
Match: AT4G17420.3 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 348.6 bits (893), Expect = 4.4e-96
Identity = 173/236 (73.31%), Postives = 203/236 (86.02%), Query Frame = 0


Query: 3   PFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVT 62
           PFQILGGEAQV+QIMLKPQEKVIA+PGSMC+MSGSIEM+N + PE EVGV  W+ GKSV+
Sbjct: 24  PFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVS 83

Query: 63  SIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTI--DH 122
           SIVLRN+G +DG+VGIAAPSLARILP+D+AMFGG++LCQPDAFLCSV+DVKV NT+   H
Sbjct: 84  SIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRH 143

Query: 123 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 182
           R RN+ +            +GLAFI+ GGSVVQKNL+VGEVL +D+SCI A+T SI+ QI
Sbjct: 144 RARNIAAA---------GAEGLAFIIAGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQI 203

Query: 183 KYN-GPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPK 236
           KYN  PVRRAVFGG+N+VTATLTGPG+VFIQSLPF RLSQRIAR+VTSPNMRENP+
Sbjct: 204 KYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHRLSQRIARSVTSPNMRENPR 250

[Close]

BLAST of HG10009311 vs. TAIR 10
Match: AT4G17420.2 (Tryptophan RNA-binding attenuator protein-like )

HSP 1 Score: 325.1 bits (832), Expect = 5.2e-89
Identity = 163/224 (72.77%), Postives = 191/224 (85.27%), Query Frame = 0


Query: 3   PFQILGGEAQVLQIMLKPQEKVIARPGSMCFMSGSIEMENVFLPENEVGVWHWLFGKSVT 62
           PFQILGGEAQV+QIMLKPQEKVIA+PGSMC+MSGSIEM+N + PE EVGV  W+ GKSV+
Sbjct: 24  PFQILGGEAQVVQIMLKPQEKVIAKPGSMCYMSGSIEMDNTYTPEQEVGVVQWILGKSVS 83

Query: 63  SIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTI--DH 122
           SIVLRN+G +DG+VGIAAPSLARILP+D+AMFGG++LCQPDAFLCSV+DVKV NT+   H
Sbjct: 84  SIVLRNTGQNDGFVGIAAPSLARILPLDLAMFGGDILCQPDAFLCSVHDVKVVNTVYQRH 143

Query: 123 RVRNVVSGVEGFLRQKLSGQGLAFILGGGSVVQKNLDVGEVLAVDISCIVAMTTSIDVQI 182
           R RN+ +            +GLAFI+ GGSVVQKNL+VGEVL +D+SCI A+T SI+ QI
Sbjct: 144 RARNIAAA---------GAEGLAFIIAGGSVVQKNLEVGEVLTIDVSCIAALTPSINFQI 203

Query: 183 KYN-GPVRRAVFGGENLVTATLTGPGMVFIQSLPFQRLSQRIAR 224
           KYN  PVRRAVFGG+N+VTATLTGPG+VFIQSLPF RLSQRIAR
Sbjct: 204 KYNAAPVRRAVFGGDNVVTATLTGPGIVFIQSLPFHRLSQRIAR 238

The following BLAST results are available for this feature:

BLAST of HG10009311 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039731.1	3.3e-138	98.46	Mitochondrial biogenesis protein AIM24 [Cucumis melo var. makuwa]	[more]
XP_008437053.1	3.3e-138	98.46	PREDICTED: uncharacterized protein LOC103482594 [Cucumis melo]	[more]
XP_038906609.1	7.4e-138	98.08	uncharacterized protein LOC120092560 isoform X1 [Benincasa hispida]	[more]
XP_023551647.1	9.6e-138	97.69	uncharacterized protein LOC111809421 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023551646.1	9.6e-138	97.69	uncharacterized protein LOC111809421 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10009311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10009311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDK4	1.6e-138	98.46	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis melo va...	[more]
A0A1S3AT84	1.6e-138	98.46	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis melo OX...	[more]
A0A0A0KKX3	4.7e-138	98.08	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis sativus...	[more]
A0A6J1E2Y5	4.7e-138	97.69	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita mosch...	[more]
A0A6J1E653	4.7e-138	97.69	Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita mosch...	[more]

BLAST of HG10009311 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17420.1	6.3e-111	76.34	Tryptophan RNA-binding attenuator protein-like	[more]
AT5G47420.1	3.4e-109	74.52	Tryptophan RNA-binding attenuator protein-like	[more]
AT4G17420.3	4.4e-96	73.31	Tryptophan RNA-binding attenuator protein-like	[more]
AT4G17420.2	5.2e-89	72.77	Tryptophan RNA-binding attenuator protein-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036983	Mitochondrial biogenesis AIM24 superfamily	GENE3D	3.60.160.10	Mitochondrial biogenesis AIM24	coord: 1..234 e-value: 1.0E-66 score: 226.5
IPR002838	Mitochondrial biogenesis protein AIM24	PFAM	PF01987	AIM24	coord: 4..211 e-value: 7.5E-48 score: 163.0
None	No IPR available	PANTHER	PTHR43657:SF2	TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN	coord: 2..259
None	No IPR available	PANTHER	PTHR43657	TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN	coord: 2..259
IPR016031	Tryptophan RNA-binding attenuator protein-like domain superfamily	SUPERFAMILY	51219	TRAP-like	coord: 1..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009311.1	HG10009311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane