HG10009291 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009291
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	vesicle-associated protein 1-2
Location	Chr06: 4478540 .. 4488756 (-)
RNA-Seq Expression	HG10009291
Synteny	HG10009291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAGGAAAATTTAGAAAGAAGCCATGTTTTAGATGTGTGAGCAAAAGTAATGCAGAACGGATTTGTTGTTATAGGAGTCTTCCACATTTTAAGTTTTGAACTGCCCCAAAATATATTTCCATTGTTGTGATCTAAGGTTCACAATGTACATCATATTGGACGTGATTTAGAATTGAAGTCCTCGATGATAATCTGCTGAGTTCAAGACCTTTTGTCGCTTCTTTCAATAATAGTCTTTTAAATACTCTCCCATTCGTTTTTCCTTTGTAGTGTGATGGATTTTAACATTTCTGACCTGTTTGTAGTAGGTTCTCAGTGGCCATCGAGAGTGGCCATCTATGACCTTCGTGAGTTGCCATCTCGAAGGTGCTGAGGATGGCCTCTATAAGGCCACTAAATGGTAAGTGTCAATTGCCATTATGCATTTTGGAGAGTCTAGAAAGAGATATATGCACCACTTACTGAGAAACAAAGAAATAGCGGGTTTGTTGTCAATCTTTTGATTTTGACTGTCATTTTTCAATCGTTTGTGTTTCTTCCGTTATGAGTGATTTACATGAAGTTGTCCATCTTATTTCTTTGTATTGTTCTTTTTACTAGTAATTGTATTATATTAGGATGCATTAAGGATTTCCACCACAAAAATGTTAGATGCAACTGATCTTCTGTAATTAAAGGCATATTTACAAAACATTCTTACATTGTGTGGTAACACTTTATAGGCATTTCTTGGTAATTCCCAAGGAGCACATTCCTACAGTTAGGAATCTCCAGAGAAGAGCCGAAGATTACTCACTCGGTAATGTAACCATTGTTAATTGCAATTCATTTACGGTTTTTTGTTTAAAGAAAGGTAAAGGAGGAGGCAATGGGGTGGGGGAACTAAGTCCTTTAAAGGCAAGAGGTATAGTTACATGTTATAACTTGATAAAACCCATTGGTATTTTTTTGTCTGCATTAAGCCTTCAATAGAACCATAATACAATTCCCTCACCCTACCATATTCTCTCCTCCCTTTGGCCTCCCTTTTTTAACCTTCTCCTTCTCAAAGCTTGCTTTCGTACATAAAAAGGCTCCAATCTAAAAGAACAAGACCGGTGTCATAATTACAAAACAGTCTAATGATTGACACTCAAGCGGAAGCATGAAACCTCATCAATTCCCAAAGCTTCTCTCTAGATTTCTCCACATCTCTAAAAATCATAGCAAAGAAGCTTGCTTGCCACAACACTTTGCCCTTCTCTCTGGGGGGACCAAAACCACCTCCTCCAACAAAGAATGCACATACCCATTACGAGCCCCACACCACTAACCCAAAAGAGCTCCACCAACGATCCCTACAATAGTTAGTGAAATGACACTCCCACAACAAATGACTTAGATCCTCCCGATGCCTCCTGCAGAGAATGCATTATTAAATCTTTGGTCACGTTGCTAATTCTGATAATGGCTTTGCTCATTTCTGTCTTCATCATTTTTATCAGTAAGTCACATGTTAGAGGTGGGGCAGACACTTTTATCCCAAGATTCCCCTCAATTAAAGCACAGGTACTCTGAATGATAACCACTCCTCAAAATCTTTTATGTTGCTAGTCTTCTGCAGGAAAACGGGCTTTATATTTTACTCTCATTTAAGTGCTAAAGCAGGGTAAAACAAAAGAAAACATGGGCTTCAATGATTTAGCAATGTCTCAATCCGTTCATTTTGGTTAATAATAGGGCTGGTTTGTGCCTGTGACTAATTATTGTGTAAACATATAAAAATTTGTTACTAATTGCATTAGTTGATGGTAGTTTATTATGAAAAATTTTATCAGTGTTAGAAAACCAATCACCTAAAAAGCTCCGTTAGGGACATAGTGCCTGGTAGCAACTTAGTTCTTCTTTCTTTTGAGGTGGACCAGGTGATGAATAATGTTCTGTAGTTGTGAATTCCTGCGAGTTCCACTGTGAAAAGATATCTTGCTTATCTCTTCATTTCCTAGATGGCATGATGGAGAATCAGAGATGGATGGCCTTTCTGTTGGGCAGAATGGATATAGGATAGATACTTGACGAGAGTTGCAGTAGTTTTTTAAAAAACATTTTAGATTATCTTTTGGTGGCAAAAAAAGGAGTCTTATTTCCCAATTGATTTATACTGAAGAACCAAGTGAAAGTATTTTAGATTATCTTTTGGTGGCAAAAAAAGGAGTCTTATTTCCCAATTGATTTATACTGAACCAAGTGAAAGTGAGTTAATAAGGTCCCGTTGGGTAACCATTTTGTTTTTGGTTCTTGGTTTTTGAAAATTAAGCCTATTTCCTCTAATTTTCTTACCATGGTTTGTATCAATCTGAAGTAAAAGAGTTGAATTCTTAGCCAAATTCCAAAAACAAAAACAAGTTTTCAAAATCTACTTTTTTTAGTTTTCAAAAATTGACTTGGTTTTTTGAAACAATAGGTAAAAAGTAATATCAAAGCAAGAAATTTAGAGGTGGAAGGGGTGTTTTTAGACTTAATTTTCAAAAACTAAAAATAAAAAACCAAATGGTTACCAAACGGGGCCTAAACCTTTACGAAAAAGCTTTTCACATCACATGTGAAGATTCTTCCAGCCATTTCTTGGAATCTGATTGAGCATAACAGGTAATGACAACCAGAGGTTTCTTGCCAAGGCGAAGAGGTGTGGATGGCATTGAGAAACTTTGGCTCCAATGACATTCCGGAGTGGAATTGTTCTGATTTGGATTTTTTATAAGGAATTGTTATAGGAATGGTATTAGGGGATTTAGAAATATTATTAGGCTTCTAAGAGTATATTAGTACGGCTTGAGAAGTGGTTATGCTAGTTTGTTATAAATAGCAAGGGTGGAGAAGGAGGAAGTTAGGCATGAATTCAGTTGGTTTAAGGCTTGAGTGATCTCAAGAAAGGAAGGGGTCAAATTCTTCAAATTACTTGGTTTATCTTCTAAGTTCTTCTATATTACATTACAATGTATTCTGTTTGGGTTCTATCAGGTTGGAACTTTATTGAGGCTGATCTAGTGAGCTCGCTGCTTGTATTTATGCAGTATACGCTTGATTAATCTCAAGAAAGTCTGATTTGATGCTTGGATTAGATTTTTGTCTTATGCAGTCTCACTCTCTTTTTGAAGTTCTAGCCAAAGTACTTGCTGGCAGGCTTGAATTGGTGTTGAATGCCACTATTTCTCCTTATCGTTTGGCCATTATAGGCTAAAGTGTTTACCTAAATTCATTTGGTGTTTTCTTTTGGAAAGTTGGTGAGAAGGTTACAGAACAGTCTCCCAAGGAACAGATAGGAATACTGATAACATAAGATATGAACCCACTTATTCTTGAGACATTTCCATCCTCAAGCCAGCTCTAGAAGACAACCAGACCTTGAAGTCATTAAGTTTTTTTCATGTAGAGCTTGAACCTAGATCTTGAAGGTTATTTCCAAATATAACAAGTCCTTATACTAGTAGGGCCAACCCCTGAAGGGTAAAGAGATTTATAATTTGGTTGGTTTTTCAGGGTCTCTATTTGTATATTTCATTTAAGGTTTAAATATTATTTTGATCTTTGCATTCTCGACTTTGGTTCATTTTGGTTCCTACTTCTGTTCATTGTAGTCTCAAATACTTTCAAAATGTCCATTTTGCTCCTTGTACTTTTAAAAAGTGACCATTTTCGTCCCTTCATTTTCATTTTTATCTCATTCCTTTCTATCAAAATTTTAGTGTGATACTTCATTCAATGACTTTCTTAAAATATAGCCATAAATTTGTATTAAAGGGTTTCCATTGTATTAAAGTTTTACAAATAGGAATCAAAATAGTCACTTTTTAAATGTAGGGGTACCAAAATAGATGTTTTGAATTGGACTAAATTGAATGATCAAAATAAAACAAAGTCGAAAGTACAGAACCAAAATAGTATTTAAACCTACATTTTATCGATGAAATGCTTTGTCCCATGTTGAAAAAAAAGTACTAAATTCTTCACAGTTCTTCTGATTTCAACTCTATTTTAGTTCTTATCTTTTACTTTAGAGCAGCATGATTCTGAATTGGTGCTTCTCTTTTCTTTCTCTGAAAGATTTGGCTTCCATCAGCCACCAATGAACAGTGTCAATCACCTACATCTCCATTGTTTTGCACTTCCTTACACACCCAGGTAACCAGTTTCTCAGTTTTCACATTAATTAACACATGCTTAGGATAGTGCTTCAAGAAATGTCCAGTTTGATACTGTTTATTTCAACAACAAAAATCTAAACTGTAACGGTGTGCAAACAGGTGGAAGTTCGTAAAATATTTATCATTGGGATCGATCGGATTCATTGAAGCCGAGAAGTTGTTGGAGAAAATAAAGCCTTGACTCACACACCAGATCACTTCAGCAGTAGTCAGTATGTGTCCTTTATGATTGTTCGCTGTTATAACTTATAAAGAGCAGAAAAGTTTGATATGTCCAACCAAAATTGAGGAATCTATTATGAGTATTATTTCATTGATTCAAAGTTGTGTCAATCTCTACAGGAATTGTTCTTTTTAGTATTCACTGGAAGAAAGGCTTTGTTTTTATTGCTTCTGATTCAGGAAAGGGACCAATGGCTGGCCTAAAATTAACAATATTCTTTTTTATTATTATTATTTTAATGGAATGAGAAGTAAAAGATGAATGTGTAAATGAGTAATCAATGTACAATTGCTCATATTTTTCTCCCTTGGAAGAATATTTAGTTTCCAGGTAGTGTGAGTTTGGTATAATTCTTGGGAATAATATTTTTAAGGGAAGTACTCTGCAAAATTATTTTGGAAACAAATGCTTCTTTTAAAAGCTGTTAGTAGTTTGAAATCTTTTTTTTTTTTTTTCTTAATAGAATTTTAATGATATTCTTTAACATGTATCTAAGCACTGAGATCTTGTAAAATATTTTTAATTTGACAATTGCACTTTCATGAGGTTGAAAATAGTGCATCATTATCAAGTTTATTAGCAATTTCAGTATACTTTCATACAATAAACTTAAAATTTATAACTAAATTTATAATTTAACAAAAAATATAGTTCAAATCCATCTTTAAACAGTCCCTAAGGAGGTATTTGGCCTACTGAATGAGGTCAATAAGTTTGGAGTTAATATGTTGGAGTTGAAAAGTTTGTATTTGAGGTATGGAGTTGTAAGATAAACTTTCTTGATAATTGTGAAAGGTAGATTAGGAGTGAGGTGAAATTATTTGATAAATATAAAAAATAGAAAAAGACAAAAAGATGGAGTTACTCGATAAATGTGCAAACTTCAATAATATCACTATTGAAATTGAGTTGTTTACACCAACTTAAGAAGTTGGTAGACCAAACGGCTCTTAATATTTTATAATTAAACTTGTTTATTAGTAAAAATTTGAAAGAAAAAGAACCAAAAACAAAATTATCATTAAATCTAGCCTAAAATTTAGATGATCTACACCATAAACATATTTATAAATTTTTTTTTTATAGAAACAAATATTTATAAATATATCATTTTATAGGTAATTGCATTATTGCATATATAGTACTTTTTTCAATGAAAATCACGAACCATTAATTAACTTGCCATGGGTTATCAGTCGTTTTTATTTATTTTTTAAGCAAAAAAGGCAATTTACTTAATTAGCAAATGGCTTCAAAAGCAGGAAACCGTTATAATAATCACTAATCCAAATAAAAAATTTACATTAAAAAGCAATTTGCAAAAAGGAAAAAACAAAGTATATTAATTAGGTCAAATGTTGCAGATGCCCTCATTACTATATATATATATACTTGATACGGTATTGATATACACTTGATTGATATACTTTATCATGATCGTCGATGACCAGCTTCAGCTTCAGCTACCAACTTGTCAACCACATATGACCACCAACTTTGTCAACTAATTCTGTCGTTAACTCTAACTACTGATTCAATATGCTAAAAATATCGCCTATAAAAGTATTTTAAATTATCAATTTGAACTTATTAGACCGTAAACAACTTTTTAAAATATAATTTTTTTCGCAATCCAAACTAAAGTTGCAATTTAATTCATGAGTTTTTTTTTTTTTTTGTACGGATGACCCCTTTTTAGGGCTAAATGAAAAATGAGTACCTTTCTAAAATTGAATGAAAGTGGTATTCTACTTGCATCAGCACCCTGTGAATTTACCTATTCGACCTTGAAAACCATCCGCGCGCTATGATTTATAAGTTTTCTTGATTCCCGATACTCTACGCTCTATACTCTATGTTATATGCTCCATGCTATATACTCGCTACTTGATCCTTAATACTCGATGCTCTATGGTTTATTAAGAAGTTCACTCAATGTTCAGTGCTCAGTGCTTAATGCTCGAGGCTCTAATGCTTTATACTCTATGTTTGATGTTCGATGCTCAATGTAAATAAACGCAAAAAACAAAAGAAAAAAAAGAAGAAGAAGAAGAAACGCAAAAAAAGACGAAAGAAAAAAATAAGAAGAAATGCAAAAAAAAAAAAAAAAAAAAAAGTAAAACAAAACGGAAGAAGAAATACAGAAAAAACAATCATAGAATAAAGAAAAAAAAGGAAGAAGAAGAAATTCATAAAAAAACGAAAAAGAAAACCTACAAAATGAAGAAAACAAAAGAATAGTGCATTTAAGGCTAAAGTGGTAATTTTACGCAAAAGACGCGAAAATTTTTTATTTCAACATTATTTTAGGCCATGCTATTTTTCCTTAACTCATTCCTAGTATGTCAAGAACACGAGAAGCCCAATGGGCCAGAGAAGGATTATGGGCCAATGGCCCATGGAAAATGAAGAATCGGCTAAATAAAGGAAAGGGAAAGAGTTAGTAATAGTATTACTTGGTTTGGGCGGCACGTGTTTTGCTCCTCCCTTCTCTTGTCTGCAGCACGTTCGCCATTGTTGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTTAATCTCTTCAATTTCATCTTCCCTTTCTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTCATCTTTTTTTCTTTTCTGGGAGATTTCCTTCTTGTGGATCTGTAATCTTTCGAGGGTTCTTTTTTGTTTTTTCTTTTGATTTTATTTCTGCTTAATTTGTTTTTGTTTCTTTGTTTCTTTCTCGTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTCAAGGTGTGTGTTTTGTTTCTCTCTGTTTGAGTCCTTCTGGGTTTGATTCAATTTGTGTGATTTTCGTAATTGATCTTTTCTACTGTGAAATGCTTTGGTACTCGTAGTATTAAGCTGTTCTGGATTTGGAATGTAGGCGTCTGCACTTCTTTTTCTCATTTCTTTCCCTCTTCTCTTTTGATGTATCTGTCTGGCGTCAGATCACGTTGTGAAATTTGTTAATTTCGTCGATTTTCAATTAGCTTGTATTTGAATACTTTGTTCTATGTTTTTTGTCCACTTAATATGAAATTGATCCTTTTTTAGGTTAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCGCCACGGTCAACATGCGACGTTATAGGTGACAAATGCCAATATCAACTATTGTCATTCGTAGTTTTAAATTTTCAAATTGGTTCTTTTTTTGTTATTGATATAGGGAGTACTTTGTTGTGTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACGGCAAAGGATATCAACGCAGAAATGGTATATATAGTGTAAATGTTTAAAGCTTGTGGTTAGTATTAGCATTTTACTTTTATTTATGGGCGTGGGGTTTGCAGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTCTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTGGGTTCTCTTTTTTCCCTTTTCGTCTTTCTGTACAGTTGATTGACACATCTTACCGTCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAACCGCAGGATAAATCTGCAGAGGTAAAAAATAGGATGATTGTTGGTATGCTATAGGTGTAAAAGTTTTATGCCTGTAGATAATATAGATGATTCTCTCTTTTCTTTTCTGTAATTCTGGTGCCTGATTTATGTGCATAGCTTGTGATGTATTTAAATTTTTCTCCAAATTGCCATTTCTATTCTAAATTTTTTTATTAGATAGAACTCAATGCTAATGTATGACCTTGTGATTGAAGTGACACTGTGAGCAATAAAGAATAAAATTTTCTTGGGACAGTATTCTATAGTAGTTGACTGTACACTTGTGAAGTTTTGGGTGAACTTGTTACATGATAGAAGTATTTGATATGTAAAGACTGCTCAAAATGGTTAGCTATACTTTAAGCATATTTTATTGCATTCTAATCTTAACTGAAAGCACTATGTTTCATTCTAGAAGTTCTTAGTGTTAACATACAGGTGGATGCAACTTCCTTGGCATAATATTAGTAATACTTGAAGATTTACTTCTGAGATTTTGTTTAAACATGCTGAGTACTTGTTTTGTATGGATTTCTTATAATGATTTGGTCGCATGTATGATCTTTAATCATATTTCCTAACTTTAACGGAACCAGTGTTGCATGATAGAAGTATTTACATCACAAAATAATAAATTTAACATGGAACTGCTATTGTTAATTTATGCATGGATATTATTGGCATAATCTTGTCCCAAGTATTGCAATATTGGGATAGAGCTACCATGAATTGGAGAGAACCTTCCTAAACTGTTGACTTAAACGATCCTTTATCTATGATATAAAAAAAACATTCCTTTATCTATGAAAGAATGATGCAATATTCTTGTCTTGTTGCCGTGTAGTAAAACTCTTTCCAAAGTTTCCTGGCAACTAATTGATTCTCTAAAGTATGTTTTATGCATTCGGTTCAGTTTTTGATTGTTCATTGAATGTTGTCAAATTCCAGAGTCTCTGTTCCTTGGCATCAGTATCCAAATAAATTTTCTTAAACGGCTAATCAATCTTTAGTCTCTTTGCCCAAAGATGCATAAGCTAAGCTCAGGACATGGTGTCTGCCCCCCTTTTAACAATAGACAGAAACTGCTTCAATCTTTCAAGATATAATTTCTTTTCAGCTCTTAATATGGGAAACTCCGTTCCTTTGCTTCGGAATTCTTTGTTGAAACTTGAAGAGTACTGTAATTCATAAGTTCAACGACCTTTGGATCTCTCATTCTCGTTACTTCTTTAAACCAAAATATTGTTTTTCTTCTTTGTTTGTGCAATGTTCTCAAACCTTTATCATGGTTCTCAGATGTTTTTAAATTATTCAGTACTGTGCAGATGGTTTGATTGACTAAATCTTGGGCCAGTGCAGTCATTTGTGTACGTGTGCGTGCGTTTTCGTGTATACATATCCTGTACTTTCTGCTTCTAGCAGGATGCTTATTGATGGCTACTTAATGCGTGCAGGCTAGAGCCCTCATAGCGAAACTCACGGAGGAAAAGAATAATGCCATGCAACAGAATAACAAACTTCGTCAGGAATTGGTAAGAAGAGGGATGATTTGAAGCTTCACTAGATGCAATTTTGCTCAAGAAGTTTCATATATGATTCCATTGGAAACAACGCCTTTACTTTTGAGATATACTTGCAAAGTCTCTTGGTCTCATTGCCTGAATACCTTTAGACGATTACGCAAATGAAATATTTACTATAACATTTAACTTTCTTTGTACGGTTGCAAATAAGACTACGCTCAACTTTGATTCTCCTTTTCGTAGAATATTAGAGTATCAAGGGTACATTGTTTCTTATAGTCAAGGTTTGCATTGTGCAGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCATCTCGTTCCTGTTCGTCATATTAGTTGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

mRNA sequence

ATGGCGGCAGGAAAATTTAGAAAGAAGCCATGTTTTAGATGTGTTCTCAGTGGCCATCGAGAGTGGCCATCTATGACCTTCGTGAGTTGCCATCTCGAAGGTGCTGAGGATGGCCTCTATAAGGCCACTAAATGGCATTTCTTGGTAATTCCCAAGGAGCACATTCCTACAGTTAGGAATCTCCAGAGAAGAGCCGAAGATTACTCACTCGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTCAAGGGAGTACTTTGTTGTGTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACGGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTCTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAACCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACGGAGGAAAAGAATAATGCCATGCAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCATCTCGTTCCTGTTCGTCATATTAGTTGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

Coding sequence (CDS)

ATGGCGGCAGGAAAATTTAGAAAGAAGCCATGTTTTAGATGTGTTCTCAGTGGCCATCGAGAGTGGCCATCTATGACCTTCGTGAGTTGCCATCTCGAAGGTGCTGAGGATGGCCTCTATAAGGCCACTAAATGGCATTTCTTGGTAATTCCCAAGGAGCACATTCCTACAGTTAGGAATCTCCAGAGAAGAGCCGAAGATTACTCACTCGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTCAAGGGAGTACTTTGTTGTGTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACGGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTCTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAACCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACGGAGGAAAAGAATAATGCCATGCAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCATCTCGTTCCTGTTCGTCATATTAGTTGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

Protein sequence

MAAGKFRKKPCFRCVLSGHREWPSMTFVSCHLEGAEDGLYKATKWHFLVIPKEHIPTVRNLQRRAEDYSLVELKKQISCSLQLSNKTESYVAFKGVLCCVVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQNNKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT

Homology

[Close]

BLAST of HG10009291 vs. NCBI nr
Match: XP_038874712.1 (vesicle-associated protein 1-2 [Benincasa hispida])

HSP 1 Score: 345.5 bits (885), Expect = 4.2e-91
Identity = 189/223 (84.75%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKTES VAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTESCVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKT DGATAKDI AEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTFDGATAKDITAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEP DKSAEARALIAKLTEEKNNA+QQN
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPLDKSAEARALIAKLTEEKNNALQQN 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLKHD RKNAGG+SFLFVILVGLIGIFFGYIIKKT
Sbjct: 199 NKLRQELELLKHDSRKNAGGVSFLFVILVGLIGIFFGYIIKKT 241

[Close]

BLAST of HG10009291 vs. NCBI nr
Match: XP_008437092.1 (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo] >KAA0039712.1 vesicle-associated protein 1-2 [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 2.1e-90
Identity = 186/223 (83.41%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKT+SYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQY 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLKHD RKNA G+SF++VILVGLIG+  GYIIKKT
Sbjct: 199 NKLRQELELLKHDSRKNASGVSFVYVILVGLIGVILGYIIKKT 241

[Close]

BLAST of HG10009291 vs. NCBI nr
Match: XP_022154809.1 (vesicle-associated protein 1-2 isoform X2 [Momordica charantia])

HSP 1 Score: 337.8 bits (865), Expect = 8.7e-89
Identity = 184/223 (82.51%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKTESYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKTVDGA+AK+INAEMFNKEAGHVVEE KLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTVDGASAKEINAEMFNKEAGHVVEECKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFND +LNTATRGYVER EPQDKSAEARALI KLTEEKNNA+QQN
Sbjct: 139 SEEGSSPRGSVSENGNFNDTELNTATRGYVERLEPQDKSAEARALITKLTEEKNNAIQQN 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLK +GRKNAGGISFLFVIL+GLIGI FGYIIKKT
Sbjct: 199 NKLRQELELLKREGRKNAGGISFLFVILIGLIGIIFGYIIKKT 241

[Close]

BLAST of HG10009291 vs. NCBI nr
Match: XP_004152405.1 (vesicle-associated protein 1-2 [Cucumis sativus] >KGN50249.1 hypothetical protein Csa_000538 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 1.5e-88
Identity = 184/222 (82.88%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKT+SYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           +DMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  SDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQY 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKK 273
           NKLRQELELLKHD RKNA G+SFLFVI VGLIGI  GY  KK
Sbjct: 199 NKLRQELELLKHDSRKNASGVSFLFVIFVGLIGIVLGYAFKK 240

[Close]

BLAST of HG10009291 vs. NCBI nr
Match: XP_022969723.1 (vesicle-associated protein 1-2-like [Cucurbita maxima])

HSP 1 Score: 335.1 bits (858), Expect = 5.6e-88
Identity = 183/223 (82.06%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQI CSLQLSNKTES VAFK               G++        +VTMQAQKEAP
Sbjct: 77  ELKKQICCSLQLSNKTESCVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 136

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
            DMQCKDKFLLQSVKT DG TAKDINAEMFNKEAGHVVEEFKLKVVYVS PQPPSPVPEG
Sbjct: 137 PDMQCKDKFLLQSVKTADGVTAKDINAEMFNKEAGHVVEEFKLKVVYVSRPQPPSPVPEG 196

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN
Sbjct: 197 SEEGSSPRGSFSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 256

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLK +GRKNAGG+SFLF+IL GLIGI FGYI+KKT
Sbjct: 257 NKLRQELELLKREGRKNAGGVSFLFIILTGLIGIIFGYIMKKT 299

[Close]

BLAST of HG10009291 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-58
Identity = 132/224 (58.93%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L NKT++YVAFK               GV+        +VTMQAQKEAP
Sbjct: 18  ELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAP 77

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           AD+QCKDKFLLQ V    GAT KD+  EMF+KEAGH VEE KL+VVYV+PP+PPSPV EG
Sbjct: 78  ADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREG 137

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPR S+S+NG  N +D   A R   +R + QD S+EARAL+ KLTEEKN+A+Q N
Sbjct: 138 SEEGSSPRASVSDNG--NASDFTAAPRFSADRVDAQDNSSEARALVTKLTEEKNSAVQLN 197

Query: 252 NKLRQELELLKHDG-RKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           N+L+QEL+ L+ +  R  +GGI F++V+LVGLIG+  GYI+K+T
Sbjct: 198 NRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of HG10009291 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 123/225 (54.67%), Postives = 163/225 (72.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L+NKT++ VAFK               GV+        +VTMQAQKEAP
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           +DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE KL+V YV+PP+PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVE-RSEPQDKSAEARALIAKLTEEKNNAMQQ 251
           SEEGSSPR S+S+NG+ ++       R  V+ ++  Q+ ++EARALI KLTEEK +A+Q 
Sbjct: 155 SEEGSSPRASVSDNGHGSEFSFE---RFIVDNKAGHQENTSEARALITKLTEEKQSAIQL 214

Query: 252 NNKLRQELELLKHDGRKN-AGGISFLFVILVGLIGIFFGYIIKKT 274
           NN+L++EL+ L+ + +K+ +GGI F++V+LVGLIG+  GYI+K+T
Sbjct: 215 NNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

[Close]

BLAST of HG10009291 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.2e-46
Identity = 117/224 (52.23%), Postives = 153/224 (68.30%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESY-VAFK--------------------GVLCCV-VTMQAQKEA 131
           ELKKQ SCS+QL+NKT +  VAFK                    G  C V VTMQAQKEA
Sbjct: 19  ELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEA 78

Query: 132 PADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPE 191
           P DMQCKDKFL+Q+V   DG T+K++ AEMFNKEAG V+E+FKL+VVY+ P  PPSPVPE
Sbjct: 79  PLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYI-PANPPSPVPE 138

Query: 192 GSEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 251
           GSEEG+SP  SL++  + + +  +  +R + E SE   KS+EA ++I+KLTEEK +A QQ
Sbjct: 139 GSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSEAWSMISKLTEEKTSATQQ 198

Query: 252 NNKLRQELELL-KHDGRKNAGGISFLFVILVGLIGIFFGYIIKK 273
           + KLR ELE+L K   +K +GG S L ++LVGL+G   GY++ +
Sbjct: 199 SQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLNR 238

[Close]

BLAST of HG10009291 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 78/141 (55.32%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 71  VELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEA 130
           +EL K++SCSL L+NKTE+YVAFK               GV+        +V MQA KEA
Sbjct: 188 IELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSSCEVLVIMQALKEA 247

Query: 131 PADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPE 190
           PADMQC+DK L Q        TAKD+ +EMF+KEAGH  EE +LKV+YV+PPQPPSPV E
Sbjct: 248 PADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQPPSPVQE 307

[Close]

BLAST of HG10009291 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 79/227 (34.80%), Postives = 115/227 (50.66%), Query Frame = 0


Query: 70  LVELKKQISCSLQLSNKTESYVAFK---------------GVL-----CCV-VTMQAQKE 129
           L EL+KQ  C L+++NKTE+YVAFK               GV+     C + VT+QAQ+E
Sbjct: 20  LFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQRE 79

Query: 130 APADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVP 189
            P DMQCKDKFLLQS          ++  + F K++G  + E KLKV Y++    PS   
Sbjct: 80  YPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYIT----PSTTQ 139

Query: 190 EGSEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQ 249
             SE G                    AT G         +S+E  + I +L EE++ A++
Sbjct: 140 RSSESG--------------------ATNG-------DGQSSETISTIQRLKEERDAAVK 199

Query: 250 QNNKLRQELELL--KHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           Q  +L+ ELE +  + + R +  G+S     +VGLIG+  G+I+K T
Sbjct: 200 QTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLT 215

[Close]

BLAST of HG10009291 vs. ExPASy TrEMBL
Match: A0A5A7T8A8 (Vesicle-associated protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00430 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90
Identity = 186/223 (83.41%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKT+SYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQY 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLKHD RKNA G+SF++VILVGLIG+  GYIIKKT
Sbjct: 199 NKLRQELELLKHDSRKNASGVSFVYVILVGLIGVILGYIIKKT 241

[Close]

BLAST of HG10009291 vs. ExPASy TrEMBL
Match: A0A1S3ATQ2 (vesicle-associated protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103482614 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90
Identity = 186/223 (83.41%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKT+SYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQY 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLKHD RKNA G+SF++VILVGLIG+  GYIIKKT
Sbjct: 199 NKLRQELELLKHDSRKNASGVSFVYVILVGLIGVILGYIIKKT 241

[Close]

BLAST of HG10009291 vs. ExPASy TrEMBL
Match: A0A6J1DN99 (vesicle-associated protein 1-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.2e-89
Identity = 184/223 (82.51%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKTESYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           ADMQCKDKFLLQSVKTVDGA+AK+INAEMFNKEAGHVVEE KLKVVYVSPPQPPSPVPEG
Sbjct: 79  ADMQCKDKFLLQSVKTVDGASAKEINAEMFNKEAGHVVEECKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFND +LNTATRGYVER EPQDKSAEARALI KLTEEKNNA+QQN
Sbjct: 139 SEEGSSPRGSVSENGNFNDTELNTATRGYVERLEPQDKSAEARALITKLTEEKNNAIQQN 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLK +GRKNAGGISFLFVIL+GLIGI FGYIIKKT
Sbjct: 199 NKLRQELELLKREGRKNAGGISFLFVILIGLIGIIFGYIIKKT 241

[Close]

BLAST of HG10009291 vs. ExPASy TrEMBL
Match: A0A0A0KMX3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161980 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 7.2e-89
Identity = 184/222 (82.88%), Postives = 191/222 (86.04%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSLQLSNKT+SYVAFK               G++        +VTMQAQKEAP
Sbjct: 19  ELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 78

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           +DMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG
Sbjct: 79  SDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 138

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS+SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 
Sbjct: 139 SEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQY 198

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKK 273
           NKLRQELELLKHD RKNA G+SFLFVI VGLIGI  GY  KK
Sbjct: 199 NKLRQELELLKHDSRKNASGVSFLFVIFVGLIGIVLGYAFKK 240

[Close]

BLAST of HG10009291 vs. ExPASy TrEMBL
Match: A0A6J1I1T7 (vesicle-associated protein 1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111468836 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.7e-88
Identity = 183/223 (82.06%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQI CSLQLSNKTES VAFK               G++        +VTMQAQKEAP
Sbjct: 77  ELKKQICCSLQLSNKTESCVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAP 136

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
            DMQCKDKFLLQSVKT DG TAKDINAEMFNKEAGHVVEEFKLKVVYVS PQPPSPVPEG
Sbjct: 137 PDMQCKDKFLLQSVKTADGVTAKDINAEMFNKEAGHVVEEFKLKVVYVSRPQPPSPVPEG 196

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPRGS SENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN
Sbjct: 197 SEEGSSPRGSFSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 256

Query: 252 NKLRQELELLKHDGRKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           NKLRQELELLK +GRKNAGG+SFLF+IL GLIGI FGYI+KKT
Sbjct: 257 NKLRQELELLKREGRKNAGGVSFLFIILTGLIGIIFGYIMKKT 299

[Close]

BLAST of HG10009291 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 228.0 bits (580), Expect = 9.0e-60
Identity = 132/224 (58.93%), Postives = 163/224 (72.77%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L NKT++YVAFK               GV+        +VTMQAQKEAP
Sbjct: 18  ELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSSEVLVTMQAQKEAP 77

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           AD+QCKDKFLLQ V    GAT KD+  EMF+KEAGH VEE KL+VVYV+PP+PPSPV EG
Sbjct: 78  ADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPRPPSPVREG 137

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQN 251
           SEEGSSPR S+S+NG  N +D   A R   +R + QD S+EARAL+ KLTEEKN+A+Q N
Sbjct: 138 SEEGSSPRASVSDNG--NASDFTAAPRFSADRVDAQDNSSEARALVTKLTEEKNSAVQLN 197

Query: 252 NKLRQELELLKHDG-RKNAGGISFLFVILVGLIGIFFGYIIKKT 274
           N+L+QEL+ L+ +  R  +GGI F++V+LVGLIG+  GYI+K+T
Sbjct: 198 NRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of HG10009291 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 208.0 bits (528), Expect = 9.7e-54
Identity = 123/225 (54.67%), Postives = 163/225 (72.44%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L+NKT++ VAFK               GV+        +VTMQAQKEAP
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           +DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE KL+V YV+PP+PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

Query: 192 SEEGSSPRGSLSENGNFNDADLNTATRGYVE-RSEPQDKSAEARALIAKLTEEKNNAMQQ 251
           SEEGSSPR S+S+NG+ ++       R  V+ ++  Q+ ++EARALI KLTEEK +A+Q 
Sbjct: 155 SEEGSSPRASVSDNGHGSEFSFE---RFIVDNKAGHQENTSEARALITKLTEEKQSAIQL 214

Query: 252 NNKLRQELELLKHDGRKN-AGGISFLFVILVGLIGIFFGYIIKKT 274
           NN+L++EL+ L+ + +K+ +GGI F++V+LVGLIG+  GYI+K+T
Sbjct: 215 NNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

[Close]

BLAST of HG10009291 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 186.4 bits (472), Expect = 3.0e-47
Identity = 117/224 (52.23%), Postives = 153/224 (68.30%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESY-VAFK--------------------GVLCCV-VTMQAQKEA 131
           ELKKQ SCS+QL+NKT +  VAFK                    G  C V VTMQAQKEA
Sbjct: 19  ELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTVTMQAQKEA 78

Query: 132 PADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPE 191
           P DMQCKDKFL+Q+V   DG T+K++ AEMFNKEAG V+E+FKL+VVY+ P  PPSPVPE
Sbjct: 79  PLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYI-PANPPSPVPE 138

Query: 192 GSEEGSSPRGSLSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAMQQ 251
           GSEEG+SP  SL++  + + +  +  +R + E SE   KS+EA ++I+KLTEEK +A QQ
Sbjct: 139 GSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSEAWSMISKLTEEKTSATQQ 198

Query: 252 NNKLRQELELL-KHDGRKNAGGISFLFVILVGLIGIFFGYIIKK 273
           + KLR ELE+L K   +K +GG S L ++LVGL+G   GY++ +
Sbjct: 199 SQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLNR 238

[Close]

BLAST of HG10009291 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 89/157 (56.69%), Postives = 105/157 (66.88%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L+NKT++ VAFK               GV+        +VTMQAQKEAP
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 191
           +DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE KL+V YV+PP+PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

Query: 192 SEEGSSPRGSLSENG----------NFNDADLNTATR 198
           SEEGSSPR S+S+NG          NF+  DL+  TR
Sbjct: 155 SEEGSSPRASVSDNGHGSEFSIFMFNFSLRDLSWTTR 191

[Close]

BLAST of HG10009291 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.6e-35
Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 72  ELKKQISCSLQLSNKTESYVAFK---------------GVLC------CVVTMQAQKEAP 131
           ELKKQISCSL L+NKT++ VAFK               GV+        +VTMQAQKEAP
Sbjct: 35  ELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQAQKEAP 94

Query: 132 ADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEG 187
           +DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE KL+V YV+PP+PPSPV EG
Sbjct: 95  SDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPRPPSPVHEG 154

The following BLAST results are available for this feature:

BLAST of HG10009291 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874712.1	4.2e-91	84.75	vesicle-associated protein 1-2 [Benincasa hispida]	[more]
XP_008437092.1	2.1e-90	83.41	PREDICTED: vesicle-associated protein 1-2 [Cucumis melo] >KAA0039712.1 vesicle-a...	[more]
XP_022154809.1	8.7e-89	82.51	vesicle-associated protein 1-2 isoform X2 [Momordica charantia]	[more]
XP_004152405.1	1.5e-88	82.88	vesicle-associated protein 1-2 [Cucumis sativus] >KGN50249.1 hypothetical protei...	[more]
XP_022969723.1	5.6e-88	82.06	vesicle-associated protein 1-2-like [Cucurbita maxima]	[more]

BLAST of HG10009291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHC8	1.3e-58	58.93	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	1.4e-52	54.67	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q84WW5	4.2e-46	52.23	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SYC9	2.7e-32	55.32	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]
Q9LVU1	8.0e-21	34.80	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]

BLAST of HG10009291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8A8	1.0e-90	83.41	Vesicle-associated protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3ATQ2	1.0e-90	83.41	vesicle-associated protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103482614 PE=4 SV=1	[more]
A0A6J1DN99	4.2e-89	82.51	vesicle-associated protein 1-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0KMX3	7.2e-89	82.88	MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161980 PE=4 SV...	[more]
A0A6J1I1T7	2.7e-88	82.06	vesicle-associated protein 1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111468836 ...	[more]

BLAST of HG10009291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45140.1	9.0e-60	58.93	plant VAP homolog 12	[more]
AT3G60600.1	9.7e-54	54.67	vesicle associated protein	[more]
AT4G00170.1	3.0e-47	52.23	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT3G60600.3	1.2e-35	56.69	vesicle associated protein	[more]
AT3G60600.2	2.6e-35	61.03	vesicle associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..192
None	No IPR available	PANTHER	PTHR10809:SF130	VESICLE-ASSOCIATED PROTEIN 1-2-LIKE	coord: 71..94
None	No IPR available	PANTHER	PTHR10809:SF130	VESICLE-ASSOCIATED PROTEIN 1-2-LIKE	coord: 99..271
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 96..162 e-value: 2.0E-11 score: 45.9
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 99..271
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 71..94
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 72..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009291.1	HG10009291.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane