HG10009194 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009194
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
Location	Chr06: 3381479 .. 3382834 (-)
RNA-Seq Expression	HG10009194
Synteny	HG10009194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCTCGCTGACAGTGGGTCAGGGTCTTCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGTATTGATTTCACTTATGGCTCTGGCCGTCTAGAGAACCGCGCCTCCCTCGAGGCTGATATCGCCGCTGTCAAGCCCACTCATGTCTTCAACGCCGCTGGAGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCACATAAGGTCGAGACCATTAGAACCAATGTGGTCGGAACCTTGAGCTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCCACTGGCTGCATTTTCGAGTACGATTCGGTTCATCCTCTTAATTCGGGGATTGGGTTCAAGGAGGATGACATCCCTAATTTTATTGGATCCTTCTATTCCAAGACGAAAGCCATGGTGAGCTACTGATTTTCACTTCTTCATTGTTGTTTTCCCTTATTTTGATTATTGCTTGATTTTGATTCTGGAATCTTGGAGTTGTATGTATTTTAGTTGCATTGTGAAATTTTTTGTTCAGATCTATAAGACCAGAGTGAATAGTTTTGTTTAGCAATTGAAATCAGCCATTATTGTGATTGATATTGGGGATTATTTTCAAGCCAAACAGGTCATTTTGATATTGGATTTTTGCTTGGTGGAGCTTTTGAATGTTCTTTAGATCTGGAATGCTAGTACATTCATTAGTAAGGATGGGTTCAATCCAGGCAGCATTGTACTTGGTTGACCTCAATATTCTGATAATTGATTGCTTTTTTTTTTTTTTTTTTAATGAAAATGTATCAAATGTGTTCTTTGAACTTGATGGGCTGATCCCATTTTTATGTCACTTTCACATTTTGGGTGTTAAAGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGTACCTTGCGCGTTCGGATGCCTATATCCTCAGACTTATCGAACCCTCGCAACTTCATTACGAAGATTACCAGATATGAGAAGGTTGTCGACATCCCGAACTCAATGACGATCTTGGACGAACTCCTCCCGATCTCGATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCATAATGAGATCTTAGAGATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTTGAGGAGCAAGCCAAAGTGATCGTCGCCCCGAGGAGCAACAACGAGCTCGATGCGAACAAGTTGAAGAACGAATTCCCTGAACTCTTGTCCATCAAGGACTCGCTCATCAAGTATGTGTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAA

mRNA sequence

ATGGGGATTCTCGCTGACAGTGGGTCAGGGTCTTCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGTATTGATTTCACTTATGGCTCTGGCCGTCTAGAGAACCGCGCCTCCCTCGAGGCTGATATCGCCGCTGTCAAGCCCACTCATGTCTTCAACGCCGCTGGAGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCACATAAGGTCGAGACCATTAGAACCAATGTGGTCGGAACCTTGAGCTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCCACTGGCTGCATTTTCGAGTACGATTCGGTTCATCCTCTTAATTCGGGGATTGGGTTCAAGGAGGATGACATCCCTAATTTTATTGGATCCTTCTATTCCAAGACGAAAGCCATGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGTACCTTGCGCGTTCGGATGCCTATATCCTCAGACTTATCGAACCCTCGCAACTTCATTACGAAGATTACCAGATATGAGAAGGTTGTCGACATCCCGAACTCAATGACGATCTTGGACGAACTCCTCCCGATCTCGATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCATAATGAGATCTTAGAGATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTTGAGGAGCAAGCCAAAGTGATCGTCGCCCCGAGGAGCAACAACGAGCTCGATGCGAACAAGTTGAAGAACGAATTCCCTGAACTCTTGTCCATCAAGGACTCGCTCATCAAGTATGTGTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAA

Coding sequence (CDS)

ATGGGGATTCTCGCTGACAGTGGGTCAGGGTCTTCTCTCAAGTTCTTGATTTACGGCCGGACCGGCTGGATTGGCGGTTTGCTTGGCCAGCTCTGTCAACAACAGGGTATTGATTTCACTTATGGCTCTGGCCGTCTAGAGAACCGCGCCTCCCTCGAGGCTGATATCGCCGCTGTCAAGCCCACTCATGTCTTCAACGCCGCTGGAGTCACCGGCCGCCCGAACGTCGACTGGTGCGAATCACATAAGGTCGAGACCATTAGAACCAATGTGGTCGGAACCTTGAGCTTGGCCGATGTGTGCCGTGAGAGAGGGTTGATCTTGATTAATTACGCCACTGGCTGCATTTTCGAGTACGATTCGGTTCATCCTCTTAATTCGGGGATTGGGTTCAAGGAGGATGACATCCCTAATTTTATTGGATCCTTCTATTCCAAGACGAAAGCCATGGTGGAGGATCTGCTGAAGAACTATGAGAATGTGTGTACCTTGCGCGTTCGGATGCCTATATCCTCAGACTTATCGAACCCTCGCAACTTCATTACGAAGATTACCAGATATGAGAAGGTTGTCGACATCCCGAACTCAATGACGATCTTGGACGAACTCCTCCCGATCTCGATCGAAATGGCGAAAAGAAACCTCACTGGAATATGGAACTTCACCAACCCGGGAGTGGTGAGCCATAATGAGATCTTAGAGATGTACAAGCAATTCATTGACCCCAATTTCACATGGAAGAACTTCACTCTTGAGGAGCAAGCCAAAGTGATCGTCGCCCCGAGGAGCAACAACGAGCTCGATGCGAACAAGTTGAAGAACGAATTCCCTGAACTCTTGTCCATCAAGGACTCGCTCATCAAGTATGTGTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAA

Protein sequence

MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA

Homology

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BLAST of HG10009194 vs. NCBI nr
Match: XP_038875992.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Benincasa hispida])

HSP 1 Score: 598.2 bits (1541), Expect = 3.9e-167
Identity = 293/300 (97.67%), Postives = 295/300 (98.33%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSG SLKFLIYGRTGWIGGLLG LCQQQGIDFTYGSGRLENRASLEADIAAVK
Sbjct: 1   MGILADSGSGPSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HPLNSGIGFKEDD PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNFTL+EQAKVIVAPRSNNELDA KLKNEFPELLSIKDSLIKYVFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300

[Close]

BLAST of HG10009194 vs. NCBI nr
Match: XP_008437195.1 (PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucumis melo] >KAA0042806.1 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.3e-166
Identity = 290/300 (96.67%), Postives = 294/300 (98.00%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSGSSLKFLIYGRTGWIGGLLG LCQQQGIDFTYGSGRLENRASLEADIAAVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HP+NSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNF LEEQAKVIVAPRSNNELDA KLKNEFPELLSIKDSL+KYVFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of HG10009194 vs. NCBI nr
Match: XP_004143938.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucumis sativus] >KGN50154.1 hypothetical protein Csa_000328 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 1.8e-164
Identity = 288/300 (96.00%), Postives = 293/300 (97.67%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGS S+LKFLIYGRTGWIGGLLG LCQ+QGIDFTYGSGRLENRASLEADIAAV 
Sbjct: 1   MGILADSGSVSTLKFLIYGRTGWIGGLLGHLCQKQGIDFTYGSGRLENRASLEADIAAVN 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HP+NSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNFTL+EQAKVIVAPRSNNELDA KLKNEFPELLSIKDSLIKYVFKPNQKT  A
Sbjct: 241 DPNFTWKNFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTPTA 300

[Close]

BLAST of HG10009194 vs. NCBI nr
Match: KAG6579471.1 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016940.1 Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 584.7 bits (1506), Expect = 4.5e-163
Identity = 286/300 (95.33%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MG+LADSGS  SLKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HPLNSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDA KLKNEFPELLSIKDSLIK VFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of HG10009194 vs. NCBI nr
Match: XP_023549712.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 285/300 (95.00%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MG+LADSGS  SLKFLIYGRTGWIGGLLG++C+QQGI F YGSGRLENR SLEADI AVK
Sbjct: 1   MGVLADSGSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HPLNSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNFTLEEQAKVIVAPRSNNELDA KLKNEFPELLSIK+SLIK VFKPNQKTSAA
Sbjct: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of HG10009194 vs. ExPASy Swiss-Prot
Match: Q9LQ04 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 2.7e-147
Identity = 248/293 (84.64%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 5   ADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHV 64
           A+  S SS  FLIYG+TGWIGGLLG+LC+ QGI +TYGSGRL++R S+ ADI +VKP+HV
Sbjct: 5   ANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHV 64

Query: 65  FNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHP 124
           FNAAGVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HP
Sbjct: 65  FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHP 124

Query: 125 LNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKI 184
           L SGIGFKE+D PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI
Sbjct: 125 LGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKI 184

Query: 185 TRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNF 244
            RYEKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+F
Sbjct: 185 ARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSF 244

Query: 245 TWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           TWKNFTLEEQAKVIVAPRSNNELDA KLK EFPEL+SIK+SLIK+VF+PN+KT
Sbjct: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of HG10009194 vs. ExPASy Swiss-Prot
Match: Q9LPG6 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana OX=3702 GN=RHM2 PE=1 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 4.0e-138
Identity = 228/292 (78.08%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 6   DSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVF 65
           DSG  +SLKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+RASL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE+D PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P F 
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           W NFT+EEQAKVIVA RSNNE+D +KL  EFPE+LSIK+SL+KYVF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of HG10009194 vs. ExPASy Swiss-Prot
Match: Q9SYM5 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.2e-137
Identity = 230/286 (80.42%), Postives = 259/286 (90.56%), Query Frame = 0


Query: 12  SLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVT 71
           SLKFLIYG+TGWIGGLLG++C +QGI + YG GRLE+R+SL  DI +VKPTHVFN+AGVT
Sbjct: 384 SLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVT 443

Query: 72  GRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLNSGIGF 131
           GRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SGIGF
Sbjct: 444 GRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF 503

Query: 132 KEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVV 191
           KE+D PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV
Sbjct: 504 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 563

Query: 192 DIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFTL 251
           +IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P F W NFTL
Sbjct: 564 NIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTL 623

Query: 252 EEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           EEQAKVIVAPRSNNE+DA+KLK EFPELLSIK+SLIKY + PN+KT
Sbjct: 624 EEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of HG10009194 vs. ExPASy Swiss-Prot
Match: Q9LH76 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 OS=Arabidopsis thaliana OX=3702 GN=RHM3 PE=2 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.6e-137
Identity = 229/291 (78.69%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 7   SGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFN 66
           SG   SLKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+RASL ADI ++KP+HVFN
Sbjct: 374 SGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFN 433

Query: 67  AAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLN 126
           AAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP  
Sbjct: 434 AAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEG 493

Query: 127 SGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITR 186
           SGIGFKE+D PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+R
Sbjct: 494 SGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISR 553

Query: 187 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 246
           Y KVV+IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+F W
Sbjct: 554 YNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKW 613

Query: 247 KNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
            NF LEEQAKVIVAPRSNNE+D  KL  EFPE+LSIKDSLIKYVF+PN++T
Sbjct: 614 SNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of HG10009194 vs. ExPASy Swiss-Prot
Match: Q5UPS5 (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L780 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.7e-56
Identity = 114/286 (39.86%), Postives = 177/286 (61.89%), Query Frame = 0


Query: 13  LKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVT- 72
           +K+LI+G  GWIG ++ ++ +QQG        R ++ +++E +I+ +KP  V +  G T 
Sbjct: 1   MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTH 60

Query: 73  --GRPNVDWCE--SHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLNS 132
             G   +D+ E     VE ++ N+ G L LA +C++  + L    TGCIFE  +    + 
Sbjct: 61  GPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADE 120

Query: 133 GIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYEN-VCTLRVRMPISSDLSNPRNFITKITR 192
             GF E+D PNF GS YS  K   + L+  ++N V  LR+RMPI+ +  NPR+FITKI  
Sbjct: 121 K-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILS 180

Query: 193 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 252
           Y ++  IPNSMTILD+++P+ I+MA+   TG +NFTNPG+VSHNEIL + +    PN TW
Sbjct: 181 YSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTW 240

Query: 253 KNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFK 293
           +N + E+Q  ++ A RSNN L+ +KL++ +P++  I   + + V K
Sbjct: 241 ENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSK 284

[Close]

BLAST of HG10009194 vs. ExPASy TrEMBL
Match: A0A5A7TLE8 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003090 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.1e-166
Identity = 290/300 (96.67%), Postives = 294/300 (98.00%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSGSSLKFLIYGRTGWIGGLLG LCQQQGIDFTYGSGRLENRASLEADIAAVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HP+NSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNF LEEQAKVIVAPRSNNELDA KLKNEFPELLSIKDSL+KYVFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of HG10009194 vs. ExPASy TrEMBL
Match: A0A1S3AU07 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo OX=3656 GN=LOC103482697 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.1e-166
Identity = 290/300 (96.67%), Postives = 294/300 (98.00%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSGSSLKFLIYGRTGWIGGLLG LCQQQGIDFTYGSGRLENRASLEADIAAVK
Sbjct: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HP+NSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNF LEEQAKVIVAPRSNNELDA KLKNEFPELLSIKDSL+KYVFKPNQKT  A
Sbjct: 241 DPNFTWKNFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of HG10009194 vs. ExPASy TrEMBL
Match: A0A0A0KMP5 (RmlD_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G156140 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 8.8e-165
Identity = 288/300 (96.00%), Postives = 293/300 (97.67%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGS S+LKFLIYGRTGWIGGLLG LCQ+QGIDFTYGSGRLENRASLEADIAAV 
Sbjct: 1   MGILADSGSVSTLKFLIYGRTGWIGGLLGHLCQKQGIDFTYGSGRLENRASLEADIAAVN 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HP+NSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPINSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPNFTWKNFTL+EQAKVIVAPRSNNELDA KLKNEFPELLSIKDSLIKYVFKPNQKT  A
Sbjct: 241 DPNFTWKNFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTPTA 300

[Close]

BLAST of HG10009194 vs. ExPASy TrEMBL
Match: A0A6J1K354 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111491279 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 286/300 (95.33%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSG  LKFLIYGRTGWIGGLLGQLCQQQGIDF YGSGRLENR SLEADIAAVK
Sbjct: 1   MGILADSGSG-PLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HPLNSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DA KLK EFPELLSIKDSL+K+VFKPNQKTSAA
Sbjct: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTSAA 299

[Close]

BLAST of HG10009194 vs. ExPASy TrEMBL
Match: A0A6J1H3G7 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111459670 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 286/300 (95.33%), Postives = 292/300 (97.33%), Query Frame = 0


Query: 1   MGILADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVK 60
           MGILADSGSG  LKFLIYGRTGWIGGLLGQLCQQQGIDF YGSGRLENR SLEADIAAVK
Sbjct: 1   MGILADSGSG-PLKFLIYGRTGWIGGLLGQLCQQQGIDFVYGSGRLENRTSLEADIAAVK 60

Query: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD 120
           PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYD
Sbjct: 61  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLNLADVCRERGLILINYATGCIFEYD 120

Query: 121 SVHPLNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180
           S HPLNSGIGFKED+IPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF
Sbjct: 121 SAHPLNSGIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNF 180

Query: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240
           ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI
Sbjct: 181 ITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFI 240

Query: 241 DPNFTWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300
           DPN TWKNF+LEEQAKVIVAPRSNNE+DA KLK EFPELLSIKDSL+K+VFKPNQKTSAA
Sbjct: 241 DPNLTWKNFSLEEQAKVIVAPRSNNEMDATKLKTEFPELLSIKDSLVKHVFKPNQKTSAA 299

[Close]

BLAST of HG10009194 vs. TAIR 10
Match: AT1G63000.1 (nucleotide-rhamnose synthase/epimerase-reductase )

HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-148
Identity = 248/293 (84.64%), Postives = 274/293 (93.52%), Query Frame = 0


Query: 5   ADSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHV 64
           A+  S SS  FLIYG+TGWIGGLLG+LC+ QGI +TYGSGRL++R S+ ADI +VKP+HV
Sbjct: 5   ANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHV 64

Query: 65  FNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHP 124
           FNAAGVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HP
Sbjct: 65  FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHP 124

Query: 125 LNSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKI 184
           L SGIGFKE+D PNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI
Sbjct: 125 LGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKI 184

Query: 185 TRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNF 244
            RYEKVVDIPNSMTILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMY+ +IDP+F
Sbjct: 185 ARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSF 244

Query: 245 TWKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           TWKNFTLEEQAKVIVAPRSNNELDA KLK EFPEL+SIK+SLIK+VF+PN+KT
Sbjct: 245 TWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of HG10009194 vs. TAIR 10
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein )

HSP 1 Score: 492.3 bits (1266), Expect = 2.8e-139
Identity = 228/292 (78.08%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 6   DSGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVF 65
           DSG  +SLKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+RASL ADI ++KPTHVF
Sbjct: 376 DSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVF 435

Query: 66  NAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPL 125
           NAAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP 
Sbjct: 436 NAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPE 495

Query: 126 NSGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT 185
            SGIGFKE+D PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 496 GSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKIS 555

Query: 186 RYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFT 245
           RY KVVDIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P F 
Sbjct: 556 RYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFK 615

Query: 246 WKNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           W NFT+EEQAKVIVA RSNNE+D +KL  EFPE+LSIK+SL+KYVF+PN++T
Sbjct: 616 WSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of HG10009194 vs. TAIR 10
Match: AT1G78570.1 (rhamnose biosynthesis 1 )

HSP 1 Score: 490.7 bits (1262), Expect = 8.2e-139
Identity = 230/286 (80.42%), Postives = 259/286 (90.56%), Query Frame = 0


Query: 12  SLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVT 71
           SLKFLIYG+TGWIGGLLG++C +QGI + YG GRLE+R+SL  DI +VKPTHVFN+AGVT
Sbjct: 384 SLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVT 443

Query: 72  GRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLNSGIGF 131
           GRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SGIGF
Sbjct: 444 GRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF 503

Query: 132 KEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVV 191
           KE+D PNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV
Sbjct: 504 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 563

Query: 192 DIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFTL 251
           +IPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMY+ +I+P F W NFTL
Sbjct: 564 NIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTL 623

Query: 252 EEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
           EEQAKVIVAPRSNNE+DA+KLK EFPELLSIK+SLIKY + PN+KT
Sbjct: 624 EEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of HG10009194 vs. TAIR 10
Match: AT3G14790.1 (rhamnose biosynthesis 3 )

HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-138
Identity = 229/291 (78.69%), Postives = 262/291 (90.03%), Query Frame = 0


Query: 7   SGSGSSLKFLIYGRTGWIGGLLGQLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFN 66
           SG   SLKFLIYG+TGW+GGLLG+LC++QGI + YG GRLE+RASL ADI ++KP+HVFN
Sbjct: 374 SGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFN 433

Query: 67  AAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLN 126
           AAG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD+ HP  
Sbjct: 434 AAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEG 493

Query: 127 SGIGFKEDDIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITR 186
           SGIGFKE+D PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+R
Sbjct: 494 SGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISR 553

Query: 187 YEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTW 246
           Y KVV+IPNSMTILDELLPISIEMAKRNL GIWNFTNPGVVSHNEILEMYK +I+P+F W
Sbjct: 554 YNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKW 613

Query: 247 KNFTLEEQAKVIVAPRSNNELDANKLKNEFPELLSIKDSLIKYVFKPNQKT 298
            NF LEEQAKVIVAPRSNNE+D  KL  EFPE+LSIKDSLIKYVF+PN++T
Sbjct: 614 SNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of HG10009194 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 45/179 (25.14%), Postives = 83/179 (46.37%), Query Frame = 0


Query: 84  VETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSVHPLNSGIGFKEDDIPNFIGSF 143
           V+TI+TNV+GTL++  + +  G  ++  +T  ++    +HP      +  +  P  + S 
Sbjct: 115 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPE--SYWGNVNPIGVRSC 174

Query: 144 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR----------NFITKITRYEKV-VD 203
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 175 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQ 234

Query: 204 IPNSMT----ILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 248
            P + T     + +++   I + + N TG  N  NPG  +  E+ E  K+ I+P+   K
Sbjct: 235 KPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIK 291

The following BLAST results are available for this feature:

BLAST of HG10009194 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875992.1	3.9e-167	97.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_008437195.1	4.3e-166	96.67	PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamn...	[more]
XP_004143938.1	1.8e-164	96.00	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
KAG6579471.1	4.5e-163	95.33	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_023549712.1	1.3e-162	95.00	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of HG10009194 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ04	2.7e-147	84.64	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
Q9LPG6	4.0e-138	78.08	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9SYM5	1.2e-137	80.42	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LH76	2.6e-137	78.69	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q5UPS5	1.7e-56	39.86	Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MI...	[more]

BLAST of HG10009194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLE8	2.1e-166	96.67	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A1S3AU07	2.1e-166	96.67	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A0A0KMP5	8.8e-165	96.00	RmlD_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G1561...	[more]
A0A6J1K354	1.1e-162	95.33	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A6J1H3G7	1.1e-162	95.33	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of HG10009194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63000.1	1.9e-148	84.64	nucleotide-rhamnose synthase/epimerase-reductase	[more]
AT1G53500.1	2.8e-139	78.08	NAD-dependent epimerase/dehydratase family protein	[more]
AT1G78570.1	8.2e-139	80.42	rhamnose biosynthesis 1	[more]
AT3G14790.1	1.8e-138	78.69	rhamnose biosynthesis 3	[more]
AT5G59290.1	1.1e-07	25.14	UDP-glucuronic acid decarboxylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 5..300 e-value: 2.8E-82 score: 278.2
None	No IPR available	PANTHER	PTHR43000:SF26	BNAC05G13120D PROTEIN	coord: 11..295
None	No IPR available	PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	coord: 11..295
None	No IPR available	CDD	cd05254	dTDP_HR_like_SDR_e	coord: 14..286 e-value: 5.29446E-63 score: 198.62
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 14..187 e-value: 1.4E-14 score: 53.8
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 12..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009194.1	HG10009194.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019305	dTDP-rhamnose biosynthetic process
biological_process	GO:0010253	UDP-rhamnose biosynthetic process
molecular_function	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity
molecular_function	GO:0008831	dTDP-4-dehydrorhamnose reductase activity