HG10009175 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009175
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2 domain-containing protein
Location	Chr06: 3179056 .. 3179589 (+)
RNA-Seq Expression	HG10009175
Synteny	HG10009175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTATCCAAAGCCTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAATTCCTTCATCCCTCTTCTCTCTCCACCGCCCTTTTCGGCCCTTCGTTACTCTCTCCACCGCGCCGGCACAGCTACAATACAGAACCACGGCGGCCGACGGTGAACTTTTTGCCTCAAATCCTATATACTTTGGCGACGTCTTTCGCATCCCATTGGACGCCGGCTTCTTCCCCGACAGATGTTTCGTTTTCCTCCGCCTCTTCTCAAAGCGGCTGCTTTTTCGCCCGGCTCTCATTGGGTGGTGCCGGATGCCGGCTGCTGATATCGGGCAGCCGCCGGTGGGTTCAGTCAGGCATCTGAGTTACCGGCTTCGTAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCGCCGTGAAAGTGGAATCTCTACAGGCCTCTGCCTCCGGCCCCGTCATGGACATGTGTCGAACGGCGATTGGCATGCCGGTGGCAATGGTGGCATTACGTGGATCAAGATGA

mRNA sequence

ATGTCTTATCCAAAGCCTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAATTCCTTCATCCCTCTTCTCTCTCCACCGCCCTTTTCGGCCCTTCGTTACTCTCTCCACCGCGCCGGCACAGCTACAATACAGAACCACGGCGGCCGACGGTGAACTTTTTGCCTCAAATCCTATATACTTTGGCGACGTCTTTCGCATCCCATTGGACGCCGGCTTCTTCCCCGACAGATGTTTCGTTTTCCTCCGCCTCTTCTCAAAGCGGCTGCTTTTTCGCCCGGCTCTCATTGGGTGGTGCCGGATGCCGGCTGCTGATATCGGGCAGCCGCCGGTGGGTTCAGTCAGGCATCTGAGTTACCGGCTTCGTAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCGCCGTGAAAGTGGAATCTCTACAGGCCTCTGCCTCCGGCCCCGTCATGGACATGTGTCGAACGGCGATTGGCATGCCGGTGGCAATGGTGGCATTACGTGGATCAAGATGA

Coding sequence (CDS)

ATGTCTTATCCAAAGCCTCCTCCGCCCTTTGTGGTGGAGATCACTGTCATATCAGCCGATGGCCTAAAAATTCCTTCATCCCTCTTCTCTCTCCACCGCCCTTTTCGGCCCTTCGTTACTCTCTCCACCGCGCCGGCACAGCTACAATACAGAACCACGGCGGCCGACGGTGAACTTTTTGCCTCAAATCCTATATACTTTGGCGACGTCTTTCGCATCCCATTGGACGCCGGCTTCTTCCCCGACAGATGTTTCGTTTTCCTCCGCCTCTTCTCAAAGCGGCTGCTTTTTCGCCCGGCTCTCATTGGGTGGTGCCGGATGCCGGCTGCTGATATCGGGCAGCCGCCGGTGGGTTCAGTCAGGCATCTGAGTTACCGGCTTCGTAAGAGAGATGGTTCGAGGAGTCGTGTGATTGTTAATCTCGCCGTGAAAGTGGAATCTCTACAGGCCTCTGCCTCCGGCCCCGTCATGGACATGTGTCGAACGGCGATTGGCATGCCGGTGGCAATGGTGGCATTACGTGGATCAAGATGA

Protein sequence

MSYPKPPPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGELFASNPIYFGDVFRIPLDAGFFPDRCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPVGSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASASGPVMDMCRTAIGMPVAMVALRGSR

Homology

[Close]

BLAST of HG10009175 vs. NCBI nr
Match: KAA0042790.1 (BON1-associated protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 9.4e-60
Identity = 132/181 (72.93%), Postives = 141/181 (77.90%), Query Frame = 0


Query: 1   MSYPK--PPPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGE 60
           MSYPK   PPPFVVEITVISADGLK  SS+FSL+RPFRPF+TLS          T ADG+
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLNRPFRPFLTLS----------TLADGD 60

Query: 61  LFASNPIY-FGDVFRIPLDAGFFPDRCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPV 120
              SNPIY FGD+F IPLD GFFP+RCF+FLRLFSKRLLF PALIGWCRMPA DI Q PV
Sbjct: 61  FLPSNPIYHFGDLFHIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 120

Query: 121 GSVRHLSYRLRKRDGSRSRVIVNLAVK-VESLQASASGPVMDMCRTAIGMPVAMVALRGS 178
           GSV  LSYRLRKRDGSRSRVIVNL +K VESLQA     VM+ C T IGMPVA V LRGS
Sbjct: 121 GSVTRLSYRLRKRDGSRSRVIVNLTLKLVESLQAVVDSQVMEPCGTVIGMPVAAVKLRGS 171

[Close]

BLAST of HG10009175 vs. NCBI nr
Match: KGN50138.1 (hypothetical protein Csa_000552 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-57
Identity = 130/181 (71.82%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 1   MSYPK--PPPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGE 60
           MSYPK   PPPFVVEITVISADGLK  SS+FSLHRPFRPF+TLST P          DG 
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVP---------DDGG 60

Query: 61  LFASNPIY-FGDVFRIPLDAGFFPDRCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPV 120
              SNPIY FGD+FRIPLD GFFP+RCF+FLRLFSKRLLF PALIGWCRMPA DI Q PV
Sbjct: 61  FLPSNPIYHFGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 120

Query: 121 GSVRHLSYRLRKRDGSRSRVIVNLAVK-VESLQASASGPVMDMCRTAIGMPVAMVALRGS 178
           GSV+ LSYRLRKRDGSRSRVIVNL +K VES        VM+ C T IGMPVA V L GS
Sbjct: 121 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVES--------VMEPCGTVIGMPVAAVKLHGS 164

[Close]

BLAST of HG10009175 vs. NCBI nr
Match: XP_042951013.1 (uncharacterized protein LOC122282978 [Carya illinoinensis] >XP_042951014.1 uncharacterized protein LOC122282978 [Carya illinoinensis] >KAG6636847.1 hypothetical protein CIPAW_11G139400 [Carya illinoinensis] >KAG6636848.1 hypothetical protein CIPAW_11G139400 [Carya illinoinensis] >KAG6688708.1 hypothetical protein I3842_11G137800 [Carya illinoinensis] >KAG7956680.1 hypothetical protein I3843_11G135500 [Carya illinoinensis])

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-31
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 7   PPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQ------------LQYRTTA 66
           PPPF++EITV+SA+GL+  SS     R  RPF+T +T P                Y+T  
Sbjct: 6   PPPFILEITVLSAEGLETTSSSTLFSRRIRPFITFTTVPPSPFSPNKSNNKKCHVYKTRV 65

Query: 67  ADGELFASNPIYFGDVFRIPLDAGFFPDR-CFVFLRLFSKRLLFRPALIGWCRMPAADIG 126
            D      NP + GD FR+PLD  FF +R   ++L LF+KRL+     +GW  +P  D+G
Sbjct: 66  DDKG--GINPTW-GDKFRVPLDTAFFANRFSAIYLHLFTKRLVVGQVQLGWFHIPVYDMG 125

Query: 127 QPPVGSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASA-------SGPVMDMCRTAIGM 171
            PPVGSVR+LSYRLR RDGSR R IVNL++K+E+L + A         P++DMCRT IG+
Sbjct: 126 SPPVGSVRYLSYRLRARDGSRCRGIVNLSIKLETLASVAGQRVPGWGSPMVDMCRTVIGI 185

[Close]

BLAST of HG10009175 vs. NCBI nr
Match: KAG2681252.1 (hypothetical protein I3760_11G135600 [Carya illinoinensis])

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-31
Identity = 83/184 (45.11%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 7   PPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQ------------LQYRTTA 66
           PPPF++EITV+SA+GL+  SS     R  RPF+T +T P                Y+T  
Sbjct: 6   PPPFILEITVLSAEGLETTSSSTLFSRRIRPFITFTTVPPSPFSPNKSNNKKCHVYKTRV 65

Query: 67  ADGELFASNPIYFGDVFRIPLDAGFFPDR-CFVFLRLFSKRLLFRPALIGWCRMPAADIG 126
            D      NP + GD FR+PLD  FF +R   ++L LF+KRL      +GW  +P  D+G
Sbjct: 66  DDKG--GINPTW-GDKFRVPLDTAFFANRFSAIYLHLFTKRLFVGQVQLGWFHIPVYDMG 125

Query: 127 QPPVGSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASA-------SGPVMDMCRTAIGM 171
            PPVGSVR+LSYRLR RDGSR R IVNL++K+E+L + A         P++DMCRT IG+
Sbjct: 126 SPPVGSVRYLSYRLRARDGSRCRGIVNLSIKLETLASVAGQRVPGWGSPMVDMCRTVIGI 185

[Close]

BLAST of HG10009175 vs. NCBI nr
Match: XP_018811911.1 (BON1-associated protein 2-like [Juglans regia] >XP_018811912.1 BON1-associated protein 2-like [Juglans regia] >KAF5478311.1 hypothetical protein F2P56_004880 [Juglans regia])

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-30
Identity = 80/183 (43.72%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 7   PPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAP-----------AQLQYRTTAA 66
           PPPF++EITV+SA+GL+  SS     R  +PF+T +T P            +     T+ 
Sbjct: 6   PPPFILEITVLSAEGLETTSSSTLFSRRIKPFITFTTVPPRPFSPNKSGNKKCHVYKTSV 65

Query: 67  DGELFASNPIYFGDVFRIPLDAGFFPDR-CFVFLRLFSKRLLFRPALIGWCRMPAADIGQ 126
           D E   +NP + GD FR+PLD  FF +R   ++L LF+K L+     +GW  +P  D+G 
Sbjct: 66  DDE-GGTNPTW-GDKFRVPLDTAFFANRFSAIYLHLFTKGLIAGQVQLGWFHIPVNDLGS 125

Query: 127 PPVGSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASA-------SGPVMDMCRTAIGMP 171
           PPVGSVR+LSYRLR RDGSR + IVNL++K+E+L + A         P++DMCRT IG+P
Sbjct: 126 PPVGSVRYLSYRLRARDGSRCQGIVNLSIKLETLASVAGQRVPDSESPMVDMCRTVIGIP 185

[Close]

BLAST of HG10009175 vs. ExPASy TrEMBL
Match: A0A5A7THM0 (BON1-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002930 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.5e-60
Identity = 132/181 (72.93%), Postives = 141/181 (77.90%), Query Frame = 0


Query: 1   MSYPK--PPPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGE 60
           MSYPK   PPPFVVEITVISADGLK  SS+FSL+RPFRPF+TLS          T ADG+
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLNRPFRPFLTLS----------TLADGD 60

Query: 61  LFASNPIY-FGDVFRIPLDAGFFPDRCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPV 120
              SNPIY FGD+F IPLD GFFP+RCF+FLRLFSKRLLF PALIGWCRMPA DI Q PV
Sbjct: 61  FLPSNPIYHFGDLFHIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 120

Query: 121 GSVRHLSYRLRKRDGSRSRVIVNLAVK-VESLQASASGPVMDMCRTAIGMPVAMVALRGS 178
           GSV  LSYRLRKRDGSRSRVIVNL +K VESLQA     VM+ C T IGMPVA V LRGS
Sbjct: 121 GSVTRLSYRLRKRDGSRSRVIVNLTLKLVESLQAVVDSQVMEPCGTVIGMPVAAVKLRGS 171

[Close]

BLAST of HG10009175 vs. ExPASy TrEMBL
Match: A0A0A0KKM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155490 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 9.4e-58
Identity = 130/181 (71.82%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 1   MSYPK--PPPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGE 60
           MSYPK   PPPFVVEITVISADGLK  SS+FSLHRPFRPF+TLST P          DG 
Sbjct: 1   MSYPKLILPPPFVVEITVISADGLKNSSSIFSLHRPFRPFLTLSTVP---------DDGG 60

Query: 61  LFASNPIY-FGDVFRIPLDAGFFPDRCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPV 120
              SNPIY FGD+FRIPLD GFFP+RCF+FLRLFSKRLLF PALIGWCRMPA DI Q PV
Sbjct: 61  FLPSNPIYHFGDLFRIPLDVGFFPNRCFIFLRLFSKRLLFGPALIGWCRMPADDISQLPV 120

Query: 121 GSVRHLSYRLRKRDGSRSRVIVNLAVK-VESLQASASGPVMDMCRTAIGMPVAMVALRGS 178
           GSV+ LSYRLRKRDGSRSRVIVNL +K VES        VM+ C T IGMPVA V L GS
Sbjct: 121 GSVKRLSYRLRKRDGSRSRVIVNLTLKLVES--------VMEPCGTVIGMPVAAVKLHGS 164

[Close]

BLAST of HG10009175 vs. ExPASy TrEMBL
Match: A0A2N9EJV2 (C2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2965 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.8e-31
Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 9   PFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAPAQLQYRTTAADGELF-------- 68
           PF++EITV+SA+GLK  +S     R  RPF+T +T P    Y  T AD +          
Sbjct: 8   PFILEITVLSAEGLKSNNSSTLFSRRIRPFITFTTVPPS-PYNLTKADKKCHVYRTRVDD 67

Query: 69  --ASNPIYFGDVFRIPLDAGFFPDR-CFVFLRLFSKRLLFRPALIGWCRMPAAD-IGQPP 128
              +NP + GD F +PLD  FF +R   + L+L++KRL+   A +GWC++P  D IG PP
Sbjct: 68  EGGTNPTW-GDKFHVPLDTTFFTNRYSTIHLQLYTKRLIVGQAQLGWCQIPVYDIIGSPP 127

Query: 129 VGSVRHLSYRLRKRDGSRSRVIVNLAVKVESL-----QASASGPVMDMCRTAIGMPVAMV 178
           VGSVR+LSYRLR RDGSRS  IVNLAVK+ESL     Q       +D CRT +G+PV ++
Sbjct: 128 VGSVRYLSYRLRARDGSRSTGIVNLAVKLESLVPVAGQRVLDSDTVDTCRTVVGIPVTVL 187

[Close]

BLAST of HG10009175 vs. ExPASy TrEMBL
Match: A0A2I4DXN2 (BON1-associated protein 2-like OS=Juglans regia OX=51240 GN=LOC108984415 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 80/183 (43.72%), Postives = 112/183 (61.20%), Query Frame = 0


Query: 7   PPPFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTAP-----------AQLQYRTTAA 66
           PPPF++EITV+SA+GL+  SS     R  +PF+T +T P            +     T+ 
Sbjct: 6   PPPFILEITVLSAEGLETTSSSTLFSRRIKPFITFTTVPPRPFSPNKSGNKKCHVYKTSV 65

Query: 67  DGELFASNPIYFGDVFRIPLDAGFFPDR-CFVFLRLFSKRLLFRPALIGWCRMPAADIGQ 126
           D E   +NP + GD FR+PLD  FF +R   ++L LF+K L+     +GW  +P  D+G 
Sbjct: 66  DDE-GGTNPTW-GDKFRVPLDTAFFANRFSAIYLHLFTKGLIAGQVQLGWFHIPVNDLGS 125

Query: 127 PPVGSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASA-------SGPVMDMCRTAIGMP 171
           PPVGSVR+LSYRLR RDGSR + IVNL++K+E+L + A         P++DMCRT IG+P
Sbjct: 126 PPVGSVRYLSYRLRARDGSRCQGIVNLSIKLETLASVAGQRVPDSESPMVDMCRTVIGIP 185

[Close]

BLAST of HG10009175 vs. ExPASy TrEMBL
Match: A0A5N6R2U9 (C2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012120 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 0


Query: 9   PFVVEITVISADGLKIPSSLFSLHRPFRPFVTLSTA----------PAQLQYRTTAADGE 68
           PF++EIT++SA+GL   S+    HR  RPF+T +TA            +    +T  D E
Sbjct: 8   PFILEITILSAEGLNTSSAALFSHR-IRPFITFTTALPSPYNPKKGDKKCHVYSTRVDDE 67

Query: 69  LFASNPIYFGDVFRIPLDAGFFPD-RCFVFLRLFSKRLLFRPALIGWCRMPAADIGQPPV 128
              +NP + GD FR+PLDA FF      V+L+L++KRL+   + +GWC++PA DIG PPV
Sbjct: 68  -GGTNPTW-GDKFRVPLDATFFTGIYSSVYLQLYTKRLIVGQSQLGWCQIPAHDIGSPPV 127

Query: 129 GSVRHLSYRLRKRDGSRSRVIVNLAVKVESLQASA--------SGPVMDMCRTAIGMPVA 171
           GSVRHLSYRLR RDGSRS+ IVNLA+K+E+L   A          P  D  +T +G+PVA
Sbjct: 128 GSVRHLSYRLRARDGSRSQGIVNLAIKLEALAPVAGQRVFLDSDSPDADTRQTVMGIPVA 185

The following BLAST results are available for this feature:

BLAST of HG10009175 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042790.1	9.4e-60	72.93	BON1-associated protein 2-like [Cucumis melo var. makuwa]	[more]
KGN50138.1	2.0e-57	71.82	hypothetical protein Csa_000552 [Cucumis sativus]	[more]
XP_042951013.1	4.1e-31	45.11	uncharacterized protein LOC122282978 [Carya illinoinensis] >XP_042951014.1 uncha...	[more]
KAG2681252.1	5.3e-31	45.11	hypothetical protein I3760_11G135600 [Carya illinoinensis]	[more]
XP_018811911.1	2.7e-30	43.72	BON1-associated protein 2-like [Juglans regia] >XP_018811912.1 BON1-associated p...	[more]

BLAST of HG10009175 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10009175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7THM0	4.5e-60	72.93	BON1-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0KKM2	9.4e-58	71.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G155490 PE=4 SV=1	[more]
A0A2N9EJV2	5.8e-31	46.77	C2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2965 PE=4 S...	[more]
A0A2I4DXN2	1.3e-30	43.72	BON1-associated protein 2-like OS=Juglans regia OX=51240 GN=LOC108984415 PE=4 SV...	[more]
A0A5N6R2U9	1.9e-29	45.86	C2 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012120 PE=4...	[more]

BLAST of HG10009175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32246	INGRESSION PROTEIN FIC1	coord: 9..172
None	No IPR available	PANTHER	PTHR32246:SF66	BON1-ASSOCIATED PROTEIN 2	coord: 9..172
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..125 score: 9.768337
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 4..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009175.1	HG10009175.1	mRNA