Homology
BLAST of HG10009160 vs. NCBI nr
Match:
XP_038875808.1 (probable DEAD-box ATP-dependent RNA helicase 48 [Benincasa hispida])
HSP 1 Score: 1388.2 bits (3592), Expect = 0.0e+00
Identity = 724/828 (87.44%), Postives = 749/828 (90.46%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLL+RHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MTSSVLLDRHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSK+ GVHETSKNSDPST YSPM+PSEHIKALANRFMKEGAID WNE
Sbjct: 61 EKQLYQARVRSEIRSKIAGVHETSKNSDPSTHYSPMTPSEHIKALANRFMKEGAIDFWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTPLPR E HGGS RIAS+VRSGSIRSPIDVK+LL EK+D GPQ+T G
Sbjct: 121 DDGPLKTPLPRSEFHGGSRRIASSVRSGSIRSPIDVKKLLPEKHDASVGPQFT-----YG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLKGRSYSV SRRSFRRNESSSSD+DTDYNSGVDSIKPFANKLARSPDKNVKSRNLNS+
Sbjct: 181 DNLKGRSYSVQSRRSFRRNESSSSDEDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSI 240
Query: 241 SNDRKAVAQRKMKFWRNG-SSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
S+DRKAVAQRKMKFWRNG SS++DDSEEEL NVDKDL WK LRTGSSASLGKCDMKMKR
Sbjct: 241 SDDRKAVAQRKMKFWRNGSSSSEDDSEEELSNVDKDLRRWKDLRTGSSASLGKCDMKMKR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVPL YNEESDFAEQV+LLRYEL KK AAE+ AL
Sbjct: 301 RVPLKSYNEESDFAEQVDLLRYELGKKAAAEDEGEKREEIIFTEKRFDECGISPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSS+NQRVP
Sbjct: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSNNQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PISVLILCP RELASQIAAEAN LLKYHDGIGVQTLVGGTRFKDDQKRLES PSQI+VAT
Sbjct: 421 PISVLILCPTRELASQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQKRLESFPSQIVVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVE+RSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQSMLFSAT
Sbjct: 481 PGRLLDHVEDRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC++APHESHFQIVCHLLKEHISC
Sbjct: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLVAPHESHFQIVCHLLKEHISC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TPDYK FCTTGM+TSLFH L REMKMNVREMHSRKPQLYRTRISDEF +SRRLILVTS
Sbjct: 601 TPDYKVIVFCTTGMITSLFHVLLREMKMNVREMHSRKPQLYRTRISDEFKQSRRLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVSARGMNYP VTLV IQVG+PSDREQYIHRLGRTGREGKEGQGVLL
Sbjct: 661 DVSARGMNYPDVTLV--------------IQVGVPSDREQYIHRLGRTGREGKEGQGVLL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
+APWE YFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR
Sbjct: 721 VAPWEGYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK
Sbjct: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 809
BLAST of HG10009160 vs. NCBI nr
Match:
XP_022928821.1 (probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita moschata])
HSP 1 Score: 1359.0 bits (3516), Expect = 0.0e+00
Identity = 711/828 (85.87%), Postives = 744/828 (89.86%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSPSEHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN RSG IRSPIDVK+LLTEK+DG GPQ G+G LNG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLKGRSYSV +RRSFRRNESSSSDDDT +NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNG-SSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
SNDRKAVAQ KMKFWR G SS+DDDSE+E+ NVDKDL SWK LRTGSSASLGK D+K KR
Sbjct: 241 SNDRKAVAQGKMKFWRKGSSSSDDDSEDEMDNVDKDLRSWKDLRTGSSASLGKFDLK-KR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVPL PY EESDFAEQV+LLR+ELSKK AAE+ AL
Sbjct: 301 RVPLKPYGEESDFAEQVQLLRHELSKKNAAEDEGDKNKETIFTQKRFDECGISPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQRVP
Sbjct: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PISVLILCP RELASQIAAEA ALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT
Sbjct: 421 PISVLILCPTRELASQIAAEAIALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSAT
Sbjct: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQIVCHLLKEHISC
Sbjct: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQIVCHLLKEHISC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TP+YK FCTTGMVTSLF+ LFREMKMNVREMH+RKPQLYRTRISDEF S+RLILVTS
Sbjct: 601 TPEYKVIVFCTTGMVTSLFYVLFREMKMNVREMHARKPQLYRTRISDEFKLSKRLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVS+RGMNYP VTLV IQVGIP DREQYIHRLGRTGREGKEGQG+LL
Sbjct: 661 DVSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRLGRTGREGKEGQGILL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
IAPWEEYFLD LKDLPLER PLPQLDSGLKLKVEESMAK+DTSIKEGAYHAWLGYYNSIR
Sbjct: 721 IAPWEEYFLDALKDLPLERCPLPQLDSGLKLKVEESMAKVDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLV+LGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 EIGRDKTTLVQLGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 813
BLAST of HG10009160 vs. NCBI nr
Match:
KAG7016956.1 (putative DEAD-box ATP-dependent RNA helicase 48 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 710/828 (85.75%), Postives = 744/828 (89.86%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSPSEHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN RSG IRSPIDVK+LLTEK+DG GPQ G+G LNG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLKGRSYSV +RRSFRRNESSSSDDDT +NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNG-SSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
SNDRKAVAQ KMKFWR G SS+DDDSE+E+ NVDKDL SWK LRTGSSASLGK D+K KR
Sbjct: 241 SNDRKAVAQGKMKFWRKGSSSSDDDSEDEMDNVDKDLRSWKDLRTGSSASLGKFDLK-KR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVPL PY EESDFAEQV+LLR+ELSKK AAE+ AL
Sbjct: 301 RVPLKPYGEESDFAEQVQLLRHELSKKNAAEDEGDKNKETIFTQKRFDECGISPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQRVP
Sbjct: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PISVLILCP RELASQIAAEA ALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT
Sbjct: 421 PISVLILCPTRELASQIAAEAIALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSAT
Sbjct: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQIVCHLLKEHISC
Sbjct: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQIVCHLLKEHISC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TP+YK FCTTGMVTSLF+ LFRE+KMNVREMH+RKPQLYRTRISDEF S+RLILVTS
Sbjct: 601 TPEYKVIVFCTTGMVTSLFYVLFRELKMNVREMHARKPQLYRTRISDEFKLSKRLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVS+RGMNYP VTLV IQVGIP DREQYIHRLGRTGREGKEGQG+LL
Sbjct: 661 DVSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRLGRTGREGKEGQGILL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
IAPWEEYFLD LKDLPLER PLPQLDSGLKLKVEESMAK+DTSIKEGAYHAWLGYYNSIR
Sbjct: 721 IAPWEEYFLDALKDLPLERCPLPQLDSGLKLKVEESMAKVDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLV+LGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 EIGRDKTTLVQLGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 813
BLAST of HG10009160 vs. NCBI nr
Match:
XP_023551234.1 (probable DEAD-box ATP-dependent RNA helicase 48 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1352.8 bits (3500), Expect = 0.0e+00
Identity = 710/828 (85.75%), Postives = 741/828 (89.49%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSPSEHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN R G IRSPIDVK+LLTEK DG GPQ G+GKLNG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRGGFIRSPIDVKKLLTEKQDGLEGPQNMGLGKLNG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLKGRSYSV +RRSFRRNESSSSDDDT +NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNG-SSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
SNDRKAVAQ KMKFWR G SS+DDDSEEE+ NVDKDL SWK LRTGSSASLGK D+K KR
Sbjct: 241 SNDRKAVAQGKMKFWRKGSSSSDDDSEEEMDNVDKDLRSWKDLRTGSSASLGKFDLK-KR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVP PY EESDFAEQV+LLR+ELSKK AAE+ AL
Sbjct: 301 RVPPKPYGEESDFAEQVQLLRHELSKKNAAEDEGDKNKETIFTQKRFDECGLSPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQRVP
Sbjct: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PISVLILCP RELASQIAAEA ALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT
Sbjct: 421 PISVLILCPTRELASQIAAEAIALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSAT
Sbjct: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
+PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQIVC+LLKEHISC
Sbjct: 541 VPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQIVCNLLKEHISC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TP+YK FCTTGMVTSLF+ LFREMKMNVREMH+RKPQLYRTRISDEF S+RLILVTS
Sbjct: 601 TPEYKVIVFCTTGMVTSLFYMLFREMKMNVREMHARKPQLYRTRISDEFKLSKRLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVS+RGMNYP VTLV IQVGIP DREQYIHRLGRTGREGKEGQG+LL
Sbjct: 661 DVSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRLGRTGREGKEGQGILL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
IAPWEEYFLD LKDLPLER LPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR
Sbjct: 721 IAPWEEYFLDALKDLPLERCALPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 813
BLAST of HG10009160 vs. NCBI nr
Match:
XP_022969937.1 (probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita maxima])
HSP 1 Score: 1351.7 bits (3497), Expect = 0.0e+00
Identity = 701/827 (84.76%), Postives = 742/827 (89.72%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
M SSVLLERHR FSSLLCK +FSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MISSVLLERHRAFSSLLCKFMFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSP EHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPREHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN RSG +RSPIDVK+LLTEK+DG GPQ G+GKL G
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFLRSPIDVKKLLTEKHDGLEGPQNMGLGKLYG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DN KGRSYSV +RRSFRRNESSSSDDDT++NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNFKGRSYSVQTRRSFRRNESSSSDDDTEFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKRR 300
NDRKAVAQ KMKFWR GSS+DDDSEEE+ NVDK+L SWK LRTGSSASLGK D+K KRR
Sbjct: 241 GNDRKAVAQGKMKFWRKGSSSDDDSEEEMDNVDKNLRSWKDLRTGSSASLGKFDLK-KRR 300
Query: 301 VPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------ALS 360
VPL PY+EESDFA+QV+LLR+ELSKK AAE+ ALS
Sbjct: 301 VPLKPYDEESDFADQVQLLRHELSKKNAAEDEGEKNKETIFTEKRFEECGISLLTVKALS 360
Query: 361 SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVPP 420
SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAAC+SSNQRVPP
Sbjct: 361 SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACNSSNQRVPP 420
Query: 421 ISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 480
I VLILCP RELASQIAA ANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP
Sbjct: 421 IFVLILCPTRELASQIAAAANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 480
Query: 481 GRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATI 540
GRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSATI
Sbjct: 481 GRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSATI 540
Query: 541 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCT 600
PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQ+VCHLLKEHISCT
Sbjct: 541 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQVVCHLLKEHISCT 600
Query: 601 PDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSD 660
P+YK FCTTGMVTSLF+ LFREMKMNVREMH+RKPQLYRTRISDEF +S+RLILVTSD
Sbjct: 601 PEYKVIVFCTTGMVTSLFYVLFREMKMNVREMHARKPQLYRTRISDEFKQSKRLILVTSD 660
Query: 661 VSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLI 720
VS+RGMNYP VTLV IQVGIP DREQYIHR+GRTGREGKEGQG+LLI
Sbjct: 661 VSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRIGRTGREGKEGQGILLI 720
Query: 721 APWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRE 780
APWEEYFLD LKDLPLER PLPQLDSGLKLKVEESMAK+DTSIKEGAYHAWLGYYNSIRE
Sbjct: 721 APWEEYFLDALKDLPLERCPLPQLDSGLKLKVEESMAKVDTSIKEGAYHAWLGYYNSIRE 780
Query: 781 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 812
BLAST of HG10009160 vs. ExPASy Swiss-Prot
Match:
Q9C8S9 (Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1)
HSP 1 Score: 880.6 bits (2274), Expect = 1.4e-254
Identity = 486/832 (58.41%), Postives = 603/832 (72.48%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
M S +L ER + + L I SR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +L++Q
Sbjct: 1 MYSLILRERSGSITGSLWNRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHET-SKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWN 120
EKQLY+AR+R+EIR+K+ G ++ K + S+ PMSP EHIK LA+RFMK GA D WN
Sbjct: 61 EKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWN 120
Query: 121 EYDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLN 180
E DGP+K SR S+ + SPIDV+RL++ D G ++
Sbjct: 121 ENDGPVK-------KSDQGSRSGSDSIDSTSNSPIDVRRLVSATCDSM------GKNRVF 180
Query: 181 GDNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNS 240
G + +G +S +SR F+RNESS + D +D++ PF+ K A + +K SR++
Sbjct: 181 GSSRRG--FSSMSR--FKRNESSCDEGDDFDAKKLDTLSPFSPKFAGTKEKVKSSRSVVG 240
Query: 241 VSNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
V ++ +R KF +N SST++DS+EE G+ K +G +TGSSASLG D+K+ +
Sbjct: 241 VIRNKGLFGRR--KFRKNDSSTEEDSDEE-GDEGKMIGWMDMRKTGSSASLGNHDIKLTK 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAE----------------------------- 360
RV N +EE + +R +LSK+ + +
Sbjct: 301 RVNRNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTL 360
Query: 361 EALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSN- 420
+ALS++G ++MTRVQ+ATLS CL+GKD LVK+KTG+GK +AFLLPAIE VLKA S
Sbjct: 361 KALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGV 420
Query: 421 QRVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQI 480
+V PI LILCP RELASQIAAE ALLK+HDGIGVQTL+GGTRFK DQ+RLES P QI
Sbjct: 421 NKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQI 480
Query: 481 IVATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSML 540
++ATPGRLLDH+EN+SGL+ RLM L + I+DEADLL+DLGFR+D+EKI+DCLPR+RQS+L
Sbjct: 481 LIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLL 540
Query: 541 FSATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKE 600
FSATIP+EVRR+SQLVLKR+H ++DT+GLGCVET +VRQSC++APHESHF +V HLLKE
Sbjct: 541 FSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKE 600
Query: 601 HISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLI 660
HI+ TPDYK FC+TGMVTSL + L REMK+NVRE+H+RKPQL+RTR+SDEF S RLI
Sbjct: 601 HINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLI 660
Query: 661 LVTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQ 720
LVTSDVSARGMNYP VTLV IQVGIPSDREQYIHRLGRTGREGK G+
Sbjct: 661 LVTSDVSARGMNYPDVTLV--------------IQVGIPSDREQYIHRLGRTGREGKGGE 720
Query: 721 GVLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYY 780
G+LLIAPWE YFLDELKDLPLE P P LDS +K +V++SMAKIDTSIKE AYHAWLGYY
Sbjct: 721 GLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYY 780
Query: 781 NSIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
NS+RE GRDKTTL EL +F SIGL+KPPALFR+TA+KMGLK I GI IRK
Sbjct: 781 NSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
BLAST of HG10009160 vs. ExPASy Swiss-Prot
Match:
O80792 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1)
HSP 1 Score: 867.8 bits (2241), Expect = 9.2e-251
Identity = 483/827 (58.40%), Postives = 599/827 (72.43%), Query Frame = 0
Query: 7 LERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQEKQLYQ 66
L + T L IFSR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +L++QEKQLY+
Sbjct: 57 LSKRITSERSLWNRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116
Query: 67 ARVRSEIRSKLVGVHET-SKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNEYDGPL 126
AR+R+EIR+K+ G ++ K + S+ PMSP EHIK LA+RFMK GA DLWN+ DGP+
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176
Query: 127 KTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNGDNLKG 186
K + GS + ++ S +PIDV+RL++ D +GK +
Sbjct: 177 K------KFDQGSRSCSDSIDS----TPIDVRRLVSATCD--------SMGKHRVLDSSR 236
Query: 187 RSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSVSNDRK 246
R +S +SR F+RNESS + D +D++ PF+ K + + +K S ++ V ++
Sbjct: 237 RGFSSMSR--FKRNESSCDEGDDVDAKKLDTLSPFSPKFSGTKEKVKSSTSVVGVIRNKG 296
Query: 247 AVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLR-TGSSASLGKCDMKMKRRVPLN 306
+R KF +N SST++DS+EE GN K +G W LR TGSSASLG D+K+ +RV N
Sbjct: 297 LFGRR--KFRKNDSSTEEDSDEE-GNEGKMIG-WMDLRKTGSSASLGNHDIKLTKRVNRN 356
Query: 307 PYNEESDFAEQVELLRYELSKKTAAE-----------------------------EALSS 366
+EE + +R +LSKK + + +ALS+
Sbjct: 357 VTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSA 416
Query: 367 AGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSN-QRVPP 426
+G V+MTRVQ+ATLS CL+GKD LVK+KTG+GK +AFLLPAIE VLKA S +V P
Sbjct: 417 SGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAP 476
Query: 427 ISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 486
I VLILCP RELASQIAAE ALLK HDGIGVQTL+GGTRF+ DQ+RLES P QI++ATP
Sbjct: 477 IFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATP 536
Query: 487 GRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATI 546
GRLLDH+EN+SGL+ RLM L + I+DEADLL+DLGF++D+EKI+DCLPR+RQS+LFSATI
Sbjct: 537 GRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATI 596
Query: 547 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCT 606
P+EVRR+SQLVLKR+H ++DT+GLGCVET +V+QSC++APHESHF +V HLLKEHI+
Sbjct: 597 PKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLKEHINNM 656
Query: 607 PDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSD 666
PDYK FC+TGMVTSL + L REMK+NVRE+H+RKPQL+RT +SDEF S RLILVTSD
Sbjct: 657 PDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSD 716
Query: 667 VSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLI 726
VSARGMNYP VTLV IQVGIPSDREQYIHRLGRTGREGK G+G+LLI
Sbjct: 717 VSARGMNYPDVTLV--------------IQVGIPSDREQYIHRLGRTGREGKGGKGLLLI 776
Query: 727 APWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRE 786
APWE YFLDELKDLPLE P P LDS +K +V++SMAKIDTSIKE AYHAWLGYYNS+RE
Sbjct: 777 APWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRE 836
Query: 787 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
GRDKTTL EL +F SIGL+KPPALFR+TA+KMGLK I GI IRK
Sbjct: 837 TGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
BLAST of HG10009160 vs. ExPASy Swiss-Prot
Match:
Q6K7R9 (DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1)
HSP 1 Score: 728.8 bits (1880), Expect = 6.7e-209
Identity = 430/836 (51.44%), Postives = 539/836 (64.47%), Query Frame = 0
Query: 26 MGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQEKQLYQARVRSEIRSKLVGVHETSK 85
MGGGPRTFPGGL+KWQ KRMHEK A+ KE+ L+ EKQLY AR+RSEIR+ + +
Sbjct: 1 MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIRASRL---PAAG 60
Query: 86 NSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNEYDGPL-KTPLPRPEM-------HGG 145
S P P S HI+ALA+RF+ GA DLWNE DGP+ + PRP +GG
Sbjct: 61 ASPPDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGPIHRADRPRPPRRIVSVGGNGG 120
Query: 146 SSRIASNVRSGSIRSPIDVKRLLTEKNDGF--AGP---QYTGVGKLNGDNLKG------- 205
R + + R + + F A P Q++ + +
Sbjct: 121 DRRKLDSTKQELPRGGKEPRLAAFNPRRDFQTAAPWWWQWSSSSAIPSRTKEASFCFFGP 180
Query: 206 -RSYSVLSRRSFRRNESSSSDDDTDYNS-GVDSIKPFANKLARSPDKNVKS----RNLNS 265
RSYSV+ F+ ++ SS + G+ S + ++L + + R L
Sbjct: 181 KRSYSVMP--LFQAHQESSGTSMVPLIARGLASARIAPSQLNGERFYSFAAGRFGRKLRP 240
Query: 266 VSNDRK----AVAQRKMKFWRNGSSTDDDS-EEELGNVDKDLGSWKGLRTGSSASLGKCD 325
S+D + A++ M+F R G+S++++S +EL W SSA+L CD
Sbjct: 241 DSSDEDDEDISTAKKDMRFARFGASSEEESGYDELEARSAIRKKW------SSAALRNCD 300
Query: 326 MKMKRRVPLNPYNEESDFAEQVELLRYELSKKTA-------------------------- 385
MK +RR + E +D A LR E+ +
Sbjct: 301 MKKERRALKSYEEENNDLAGSFRELREEIKNREVLGAERRRYESRGESLFTNKRFEECGI 360
Query: 386 ---AEEALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAAC 445
+AL+ AGYV+ T VQE L +CLEGKD LVK+KTG+GK AFLLPAIE+VL A
Sbjct: 361 SPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMK 420
Query: 446 SSSNQRVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESV 505
S +N RV PI LILCP RELA Q+ AEAN LLKYH GIGVQ+L+GGTRFK DQ+RLES
Sbjct: 421 SHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQRRLESD 480
Query: 506 PSQIIVATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRR 565
P QI+VATPGRLLDH+EN+S SVRLMGL +L+LDEAD L+DLGFR DIEKIVD LPR+R
Sbjct: 481 PCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSLPRQR 540
Query: 566 QSMLFSATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCH 625
Q++LFSATIP+EVRR+SQLVLKR+HVFVDTVGLG VETPT+V Q ++ PHE HF +V
Sbjct: 541 QTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVEQLYLVMPHELHFHMVYR 600
Query: 626 LLKEHISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRS 685
LL+EHI DYK FCTT MVT + + R++K+NVRE+HSRKPQLYRTRIS+EF S
Sbjct: 601 LLREHIDQEVDYKVIVFCTTAMVTEFMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDS 660
Query: 686 RRLILVTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREG 745
RLILVTSDVS RG+NYP VTLV IQVG+PSDRE YIHRLGRTGREG
Sbjct: 661 SRLILVTSDVSTRGVNYPGVTLV--------------IQVGVPSDREHYIHRLGRTGREG 720
Query: 746 KEGQGVLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAW 800
K G+G+LL+APWEEYFL+E+ DLP+++ P +D +K KV+ S+ +D SIKE AYHAW
Sbjct: 721 KSGKGILLLAPWEEYFLNEIHDLPVQKSQTPNIDEEMKRKVDGSIKIVDMSIKEAAYHAW 780
BLAST of HG10009160 vs. ExPASy Swiss-Prot
Match:
Q9FNM7 (DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 PE=1 SV=2)
HSP 1 Score: 533.9 bits (1374), Expect = 3.2e-150
Identity = 299/634 (47.16%), Postives = 406/634 (64.04%), Query Frame = 0
Query: 179 NGDNLKGRS-YSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKS--- 238
+G + +GRS +V S SFR + D + + D + D+NV+S
Sbjct: 236 SGSSFRGRSDRNVDSGSSFRGRSDRNVDSGSSFRGRNDRNVDSGSSFRGRNDRNVESGFR 295
Query: 239 RNLNSVSNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCD 298
R S +N R + SS DD++ LGN+D DL S S +
Sbjct: 296 REPGSENNRGLGKQTRGLSLEEEDSSDDDENRVGLGNID-DLPS----EDSSDEDDENDE 355
Query: 299 MKMKRRVPLNPYNEESDFAEQVELLRYELSK--------KTAAEEALSSAGYVRMTRVQE 358
+K+ + E V+ LSK + +A+ AG+ MT VQE
Sbjct: 356 PLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQE 415
Query: 359 ATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVPPISVLILCPNREL 418
ATL + L+GKD L K+KTG+GK VAFLLPAIEAV+K+ +S + R PPI VL++CP REL
Sbjct: 416 ATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTREL 475
Query: 419 ASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATPGRLLDHVENRSG 478
ASQ AAEAN LLKYH IGVQ ++GGT+ +Q+R+++ P QI+VATPGRL DH+EN SG
Sbjct: 476 ASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSG 535
Query: 479 LSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATIPREVRRISQLVL 538
+ RLMG+ +L+LDEAD L+D+GFR+DIE+I+ +P++RQ+ LFSAT+P EVR+I + L
Sbjct: 536 FATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVAL 595
Query: 539 KREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCTPDYK--SFCTTG 598
KR+H F++ V G ET +V Q MIA + HF ++ LLKEHI+ DYK FCTT
Sbjct: 596 KRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTA 655
Query: 599 MVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSDVSARGMNYPAVT 658
MVT L L ++ +NVRE+HSRKPQ YRTR+SDEF +S+ +ILVTSDVSARG++YP V+
Sbjct: 656 MVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVS 715
Query: 659 LVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLIAPWEEYFLDELK 718
LV +Q+G+PSDREQYIHRLGRTGR+GKEG+GVLL+APWEEYF+ +K
Sbjct: 716 LV--------------VQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVK 775
Query: 719 DLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIREIGRDKTTLVELG 778
DLP+ + PLP +D +V++ +++++ KE AY AWLGYY S + I RD T LVEL
Sbjct: 776 DLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELA 835
Query: 779 KQFSESIGLQKPPALFRKTALKMGLKDIPGIRIR 799
+FS S+GL PPA+ + KMGLK++PG+R +
Sbjct: 836 NEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 850
BLAST of HG10009160 vs. ExPASy Swiss-Prot
Match:
Q9FFQ1 (DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 PE=2 SV=2)
HSP 1 Score: 522.7 bits (1345), Expect = 7.3e-147
Identity = 303/666 (45.50%), Postives = 416/666 (62.46%), Query Frame = 0
Query: 151 RSPIDVKRLLTEKNDGFAGPQYTGVGKLNGDNLKGRSYSVLSRRSFRRNESSSSDDDTDY 210
+S I+ + L+ GF G+ K + ++ + RS R +R + D +
Sbjct: 76 KSLIEDEEELSNWVSGFRTGSSRGILKSDDEDEEDRS---RGRNQEKRGIRNQVDSFRNK 135
Query: 211 NSGVDSIKPFANKL-ARSPDKNVKSRNLNSVSNDR---KAVAQRKMKFWRNGSSTDDDSE 270
G D + F +++ +S + + + R S S DR K + +R+ + SS +D
Sbjct: 136 RYGGDRERGFNSRIQGKSSEASFRGRKETSFSRDREDEKGLRKREDLRLEDESSDEDVKS 195
Query: 271 EELGNVDKDLGSWKGLRTGSSASLGKCDMKMKRRVPLNPYNEES------------DFAE 330
+G++ DL L D K+ V +++E+ +
Sbjct: 196 LVMGDIG-DL-----LSEDDEEEDQDYDFLKKKAVSAFGFDKENVIEADKTRNANDSYLT 255
Query: 331 QVELLRYELSKKTAAEEALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLL 390
+ Y LS + +A+ AGY MT VQEATL + L+GKD L K+KTG+GK VAFLL
Sbjct: 256 KTRFDHYPLSPLSL--KAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLL 315
Query: 391 PAIEAVLKAACSSSNQRVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTR 450
P+IE V+K+ +S + + PPI L++CP RELA+Q A EAN LLKYH IGVQ ++GGTR
Sbjct: 316 PSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTR 375
Query: 451 FKDDQKRLESVPSQIIVATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDI 510
+QKR+++ P QI+VATPGRL DH+EN G + RL G+ +L+LDEAD L+D+GFRKDI
Sbjct: 376 LGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDI 435
Query: 511 EKIVDCLPRRRQSMLFSATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIA 570
E+I+ +P+ RQ+ LFSAT+P EVR+I + L+R+H FV+ V G +ET QVRQ MIA
Sbjct: 436 ERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIA 495
Query: 571 PHESHFQIVCHLLKEHISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLY 630
+ HF ++ LL+EHI DYK FCTT MVT L L E+ +NVRE+HSRKPQ Y
Sbjct: 496 SLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSY 555
Query: 631 RTRISDEFNRSRRLILVTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQY 690
RTR+S+EF +S+ LILVTSDVSARG++YP VTLVL QVG+P DREQY
Sbjct: 556 RTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVL--------------QVGLPKDREQY 615
Query: 691 IHRLGRTGREGKEGQGVLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKID 750
IHRLGRTGR+GKEG+G+LL+APWEEYFL LKDLP+ + PLP +D KV++++ ++
Sbjct: 616 IHRLGRTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVE 675
Query: 751 TSIKEGAYHAWLGYYNSIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDI 799
KE AY AWLGYYNS + IGRDK LVEL +FS S+GL PPA+ + KMGLK++
Sbjct: 676 MRNKEAAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNV 716
BLAST of HG10009160 vs. ExPASy TrEMBL
Match:
A0A6J1ELD4 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita moschata OX=3662 GN=LOC111435619 PE=4 SV=1)
HSP 1 Score: 1359.0 bits (3516), Expect = 0.0e+00
Identity = 711/828 (85.87%), Postives = 744/828 (89.86%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLLERHR FSSLLCK IFSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MTSSVLLERHRAFSSLLCKFIFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSPSEHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPSEHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN RSG IRSPIDVK+LLTEK+DG GPQ G+G LNG
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFIRSPIDVKKLLTEKHDGLEGPQNMGLGNLNG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLKGRSYSV +RRSFRRNESSSSDDDT +NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNLKGRSYSVQTRRSFRRNESSSSDDDTGFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNG-SSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
SNDRKAVAQ KMKFWR G SS+DDDSE+E+ NVDKDL SWK LRTGSSASLGK D+K KR
Sbjct: 241 SNDRKAVAQGKMKFWRKGSSSSDDDSEDEMDNVDKDLRSWKDLRTGSSASLGKFDLK-KR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVPL PY EESDFAEQV+LLR+ELSKK AAE+ AL
Sbjct: 301 RVPLKPYGEESDFAEQVQLLRHELSKKNAAEDEGDKNKETIFTQKRFDECGISPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQRVP
Sbjct: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PISVLILCP RELASQIAAEA ALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT
Sbjct: 421 PISVLILCPTRELASQIAAEAIALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSAT
Sbjct: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQIVCHLLKEHISC
Sbjct: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQIVCHLLKEHISC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TP+YK FCTTGMVTSLF+ LFREMKMNVREMH+RKPQLYRTRISDEF S+RLILVTS
Sbjct: 601 TPEYKVIVFCTTGMVTSLFYVLFREMKMNVREMHARKPQLYRTRISDEFKLSKRLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVS+RGMNYP VTLV IQVGIP DREQYIHRLGRTGREGKEGQG+LL
Sbjct: 661 DVSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRLGRTGREGKEGQGILL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
IAPWEEYFLD LKDLPLER PLPQLDSGLKLKVEESMAK+DTSIKEGAYHAWLGYYNSIR
Sbjct: 721 IAPWEEYFLDALKDLPLERCPLPQLDSGLKLKVEESMAKVDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLV+LGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 EIGRDKTTLVQLGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 813
BLAST of HG10009160 vs. ExPASy TrEMBL
Match:
A0A6J1HXQ2 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita maxima OX=3661 GN=LOC111468985 PE=4 SV=1)
HSP 1 Score: 1351.7 bits (3497), Expect = 0.0e+00
Identity = 701/827 (84.76%), Postives = 742/827 (89.72%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
M SSVLLERHR FSSLLCK +FSRSMGGGPRTFPGG+NKWQWKRMHEKRAKEKEKRL+EQ
Sbjct: 1 MISSVLLERHRAFSSLLCKFMFSRSMGGGPRTFPGGINKWQWKRMHEKRAKEKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIRSKL G +E SKNSDPSTSYSPMSP EHI ALANRFMKEGAIDLWNE
Sbjct: 61 EKQLYQARVRSEIRSKLAGDYEISKNSDPSTSYSPMSPREHIHALANRFMKEGAIDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTP+PRP++HGG RIASN RSG +RSPIDVK+LLTEK+DG GPQ G+GKL G
Sbjct: 121 DDGPLKTPIPRPQLHGGLRRIASNDRSGFLRSPIDVKKLLTEKHDGLEGPQNMGLGKLYG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DN KGRSYSV +RRSFRRNESSSSDDDT++NSGVDS+KPF +KLARS DKNVKSRNLNSV
Sbjct: 181 DNFKGRSYSVQTRRSFRRNESSSSDDDTEFNSGVDSVKPFVHKLARSSDKNVKSRNLNSV 240
Query: 241 SNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKRR 300
NDRKAVAQ KMKFWR GSS+DDDSEEE+ NVDK+L SWK LRTGSSASLGK D+K KRR
Sbjct: 241 GNDRKAVAQGKMKFWRKGSSSDDDSEEEMDNVDKNLRSWKDLRTGSSASLGKFDLK-KRR 300
Query: 301 VPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------ALS 360
VPL PY+EESDFA+QV+LLR+ELSKK AAE+ ALS
Sbjct: 301 VPLKPYDEESDFADQVQLLRHELSKKNAAEDEGEKNKETIFTEKRFEECGISLLTVKALS 360
Query: 361 SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVPP 420
SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAAC+SSNQRVPP
Sbjct: 361 SAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACNSSNQRVPP 420
Query: 421 ISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 480
I VLILCP RELASQIAA ANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP
Sbjct: 421 IFVLILCPTRELASQIAAAANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 480
Query: 481 GRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATI 540
GRLLDHVENRSGLSVRLMGLTMLILDEADLL+DLGFRKDIEKIVDCLPRRRQS++FSATI
Sbjct: 481 GRLLDHVENRSGLSVRLMGLTMLILDEADLLLDLGFRKDIEKIVDCLPRRRQSLMFSATI 540
Query: 541 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCT 600
PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQ+VCHLLKEHISCT
Sbjct: 541 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQVVCHLLKEHISCT 600
Query: 601 PDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSD 660
P+YK FCTTGMVTSLF+ LFREMKMNVREMH+RKPQLYRTRISDEF +S+RLILVTSD
Sbjct: 601 PEYKVIVFCTTGMVTSLFYVLFREMKMNVREMHARKPQLYRTRISDEFKQSKRLILVTSD 660
Query: 661 VSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLI 720
VS+RGMNYP VTLV IQVGIP DREQYIHR+GRTGREGKEGQG+LLI
Sbjct: 661 VSSRGMNYPDVTLV--------------IQVGIPFDREQYIHRIGRTGREGKEGQGILLI 720
Query: 721 APWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRE 780
APWEEYFLD LKDLPLER PLPQLDSGLKLKVEESMAK+DTSIKEGAYHAWLGYYNSIRE
Sbjct: 721 APWEEYFLDALKDLPLERCPLPQLDSGLKLKVEESMAKVDTSIKEGAYHAWLGYYNSIRE 780
Query: 781 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGI+IRK
Sbjct: 781 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIKIRK 812
BLAST of HG10009160 vs. ExPASy TrEMBL
Match:
A0A1S3AT64 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo OX=3656 GN=LOC103482724 PE=4 SV=1)
HSP 1 Score: 1351.3 bits (3496), Expect = 0.0e+00
Identity = 709/831 (85.32%), Postives = 740/831 (89.05%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLL+RHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAK+KEKRL+EQ
Sbjct: 1 MTSSVLLDRHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKDKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSK-NSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWN 120
EKQLYQAR+RSEIRSKLVG HETSK NSDPSTSYSP SPSEHIK LANRFMK+GAIDLWN
Sbjct: 61 EKQLYQARIRSEIRSKLVGAHETSKNNSDPSTSYSPKSPSEHIKDLANRFMKQGAIDLWN 120
Query: 121 EYDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLN 180
E DGPLKTPLPRP ++ GS RIASNVRSGSIRSPIDVKRLL E +DGF G G LN
Sbjct: 121 EDDGPLKTPLPRPALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHNMG---LN 180
Query: 181 GDNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNS 240
GDN+KGRSYSV SRRSFRRNESSSSDDD DYNSG DSIKPFAN LARSPD+N KSRNLNS
Sbjct: 181 GDNVKGRSYSVQSRRSFRRNESSSSDDDMDYNSGADSIKPFANNLARSPDRNAKSRNLNS 240
Query: 241 VSNDRKAVAQRKMKFWRNGS-STDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMK 300
+SNDRKAV QR+ KFWRNGS S+DDDSEEELG+VDKDL SWKGL+TGSSASLGKCD+KMK
Sbjct: 241 ISNDRKAVPQRRTKFWRNGSLSSDDDSEEELGDVDKDLRSWKGLKTGSSASLGKCDIKMK 300
Query: 301 RRVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------- 360
+RV L P++EESDFAEQVELLRYELSKKTA EE
Sbjct: 301 KRVHLKPFDEESDFAEQVELLRYELSKKTAVEEEGEKREEIIFTEKRFDECGYVISPLTV 360
Query: 361 -ALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQ 420
ALSS+GYVRMTRVQEATLS CLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQ
Sbjct: 361 KALSSSGYVRMTRVQEATLSPCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQ 420
Query: 421 RVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQII 480
RVPPI VLILCP RELASQIAAEAN LLKYHDGIGVQTLVGGTRFKDDQKRLES PSQII
Sbjct: 421 RVPPIFVLILCPTRELASQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQKRLESFPSQII 480
Query: 481 VATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLF 540
VATPGRLLDHVENRSGLSVRLMGL MLILDEAD L+DLGFRKDIEKIVDCLPR+RQSMLF
Sbjct: 481 VATPGRLLDHVENRSGLSVRLMGLKMLILDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 540
Query: 541 SATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEH 600
SATIPREVRRISQLVLKREHVFV+TVG+GCVETP QVRQSC+IAPH SHFQIVCHLLKEH
Sbjct: 541 SATIPREVRRISQLVLKREHVFVNTVGIGCVETPAQVRQSCLIAPHGSHFQIVCHLLKEH 600
Query: 601 ISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLIL 660
ISCTPDYK FCTTGMVTSL H LFREMKMNVREMHSRKPQLYRTRISDEF +SR+++L
Sbjct: 601 ISCTPDYKVIVFCTTGMVTSLLHVLFREMKMNVREMHSRKPQLYRTRISDEFKQSRQIVL 660
Query: 661 VTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQG 720
VTSDVSARGMNYP VTLVL QVGIPSDREQYIHRLGRTGREGKEGQG
Sbjct: 661 VTSDVSARGMNYPDVTLVL--------------QVGIPSDREQYIHRLGRTGREGKEGQG 720
Query: 721 VLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN 780
+LLIAPWEEYFL+ELKDLPLERR LPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN
Sbjct: 721 ILLIAPWEEYFLEELKDLPLERRRLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN 780
Query: 781 SIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
SIREIGRDKTTLVELGKQFSESIGLQ PPALFRKTALKMGLKDIPGIRIRK
Sbjct: 781 SIREIGRDKTTLVELGKQFSESIGLQNPPALFRKTALKMGLKDIPGIRIRK 814
BLAST of HG10009160 vs. ExPASy TrEMBL
Match:
A0A5A7TMI7 (Putative DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002820 PE=4 SV=1)
HSP 1 Score: 1349.3 bits (3491), Expect = 0.0e+00
Identity = 708/831 (85.20%), Postives = 739/831 (88.93%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLL+RHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAK+KEKRL+EQ
Sbjct: 1 MTSSVLLDRHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKDKEKRLLEQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSK-NSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWN 120
EKQLY AR+RSEIRSKLVG HETSK NSDPSTSYSP SPSEHIK LANRFMK+GAIDLWN
Sbjct: 61 EKQLYHARIRSEIRSKLVGAHETSKNNSDPSTSYSPKSPSEHIKDLANRFMKQGAIDLWN 120
Query: 121 EYDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLN 180
E DGPLKTPLPRP ++ GS RIASNVRSGSIRSPIDVKRLL E +DGF G G LN
Sbjct: 121 EDDGPLKTPLPRPALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHNMG---LN 180
Query: 181 GDNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNS 240
GDN+KGRSYSV SRRSFRRNESSSSDDD DYNSG DSIKPFAN LARSPD+N KSRNLNS
Sbjct: 181 GDNVKGRSYSVQSRRSFRRNESSSSDDDMDYNSGADSIKPFANNLARSPDRNAKSRNLNS 240
Query: 241 VSNDRKAVAQRKMKFWRNGS-STDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMK 300
+SNDRKAV QR+ KFWRNGS S+DDDSEEELG+VDKDL SWKGL+TGSSASLGKCD+KMK
Sbjct: 241 ISNDRKAVPQRRTKFWRNGSLSSDDDSEEELGDVDKDLRSWKGLKTGSSASLGKCDIKMK 300
Query: 301 RRVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------- 360
+RV L P++EESDFAEQVELLRYELSKKTA EE
Sbjct: 301 KRVHLKPFDEESDFAEQVELLRYELSKKTAVEEEGEKREEIIFTEKRFDECGYVISPLTV 360
Query: 361 -ALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQ 420
ALSS+GYVRMTRVQEATLS CLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSSNQ
Sbjct: 361 KALSSSGYVRMTRVQEATLSPCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQ 420
Query: 421 RVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQII 480
RVPPI VLILCP RELASQIAAEAN LLKYHDGIGVQTLVGGTRFKDDQKRLES PSQII
Sbjct: 421 RVPPIFVLILCPTRELASQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQKRLESFPSQII 480
Query: 481 VATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLF 540
VATPGRLLDHVENRSGLSVRLMGL MLILDEAD L+DLGFRKDIEKIVDCLPR+RQSMLF
Sbjct: 481 VATPGRLLDHVENRSGLSVRLMGLKMLILDEADHLLDLGFRKDIEKIVDCLPRQRQSMLF 540
Query: 541 SATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEH 600
SATIPREVRRISQLVLKREHVFV+TVG+GCVETP QVRQSC+IAPH SHFQIVCHLLKEH
Sbjct: 541 SATIPREVRRISQLVLKREHVFVNTVGIGCVETPAQVRQSCLIAPHGSHFQIVCHLLKEH 600
Query: 601 ISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLIL 660
ISCTPDYK FCTTGMVTSL H LFREMKMNVREMHSRKPQLYRTRISDEF +SR+++L
Sbjct: 601 ISCTPDYKVIVFCTTGMVTSLLHVLFREMKMNVREMHSRKPQLYRTRISDEFKQSRQIVL 660
Query: 661 VTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQG 720
VTSDVSARGMNYP VTLVL QVGIPSDREQYIHRLGRTGREGKEGQG
Sbjct: 661 VTSDVSARGMNYPDVTLVL--------------QVGIPSDREQYIHRLGRTGREGKEGQG 720
Query: 721 VLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN 780
+LLIAPWEEYFL+ELKDLPLERR LPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN
Sbjct: 721 ILLIAPWEEYFLEELKDLPLERRRLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN 780
Query: 781 SIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
SIREIGRDKTTLVELGKQFSESIGLQ PPALFRKTALKMGLKDIPGIRIRK
Sbjct: 781 SIREIGRDKTTLVELGKQFSESIGLQNPPALFRKTALKMGLKDIPGIRIRK 814
BLAST of HG10009160 vs. ExPASy TrEMBL
Match:
A0A6J1DZQ8 (probable DEAD-box ATP-dependent RNA helicase 48 OS=Momordica charantia OX=3673 GN=LOC111026096 PE=4 SV=1)
HSP 1 Score: 1332.0 bits (3446), Expect = 0.0e+00
Identity = 699/828 (84.42%), Postives = 733/828 (88.53%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
MTSSVLL+RH+TFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRL++Q
Sbjct: 1 MTSSVLLQRHQTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLDQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHETSKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNE 120
EKQLYQARVRSEIR KL GV +TS NSDPSTSYSPMSPSEHIKALANRFMKEGA DLWNE
Sbjct: 61 EKQLYQARVRSEIRCKLAGVPDTSSNSDPSTSYSPMSPSEHIKALANRFMKEGAXDLWNE 120
Query: 121 YDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNG 180
DGPLKTPLPRP + GG RI GSIRSP+DVK+LLTEK+D GP+ G GK+NG
Sbjct: 121 DDGPLKTPLPRPHLRGGPGRI------GSIRSPVDVKKLLTEKDDVLGGPRNMGFGKVNG 180
Query: 181 DNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSV 240
DNLK RSYSV RRSFRRNESSSSDDD +YNSGVDSIKPFA+KLA SPDKNVKSR+LN++
Sbjct: 181 DNLKSRSYSVQIRRSFRRNESSSSDDDVNYNSGVDSIKPFAHKLAPSPDKNVKSRDLNNL 240
Query: 241 SNDRKAVAQRKMKFWRNGSST-DDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
NDRKAVAQRK+KFWRNG ST DDDSEEELGNVDK+ SWK LRTGSSASLGKCDMKMKR
Sbjct: 241 RNDRKAVAQRKIKFWRNGGSTSDDDSEEELGNVDKESRSWKDLRTGSSASLGKCDMKMKR 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAEE--------------------------AL 360
RVP Y+EESDFAEQVELLR+EL KK AAE+ AL
Sbjct: 301 RVPPKAYDEESDFAEQVELLRHELRKKNAAEDHGEKSEEIIFTQKRFDGCGISPLTVKAL 360
Query: 361 SSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVP 420
SSAGYV+MTRVQEATLS CLEGKDTLVKSKTGSGK VAFLLPAIEAVLKAACSSS+QRVP
Sbjct: 361 SSAGYVQMTRVQEATLSHCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSSQRVP 420
Query: 421 PISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVAT 480
PI VLILCP RELASQIAAEA +LKYHDGIGVQTLVGGTRFKDDQKRLES PSQIIVAT
Sbjct: 421 PIFVLILCPTRELASQIAAEATVMLKYHDGIGVQTLVGGTRFKDDQKRLESDPSQIIVAT 480
Query: 481 PGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSAT 540
PGRLLDHVEN+SGLSVRLMGL MLILDEADLL+DLGFRKDIEKIVDCLPR+RQS+LFSAT
Sbjct: 481 PGRLLDHVENKSGLSVRLMGLKMLILDEADLLLDLGFRKDIEKIVDCLPRQRQSLLFSAT 540
Query: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISC 600
IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSC+IAPHESHFQIVCHLLK+HI C
Sbjct: 541 IPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCLIAPHESHFQIVCHLLKKHILC 600
Query: 601 TPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTS 660
TPDYK FCTTGMVTSLFH LFREMKMNVREMHSRKPQLYRTRISDEF +SR+LILVTS
Sbjct: 601 TPDYKVIVFCTTGMVTSLFHVLFREMKMNVREMHSRKPQLYRTRISDEFKQSRQLILVTS 660
Query: 661 DVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLL 720
DVSARGMNYP VTLV IQVGIPSDREQYIHRLGRTGREGKEGQG+LL
Sbjct: 661 DVSARGMNYPDVTLV--------------IQVGIPSDREQYIHRLGRTGREGKEGQGILL 720
Query: 721 IAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
IAPWE+YFLDELKDLPLER PLPQLDS LKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR
Sbjct: 721 IAPWEQYFLDELKDLPLERCPLPQLDSDLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIR 780
Query: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK
Sbjct: 781 EIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 808
BLAST of HG10009160 vs. TAIR 10
Match:
AT1G63250.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 880.6 bits (2274), Expect = 9.8e-256
Identity = 486/832 (58.41%), Postives = 603/832 (72.48%), Query Frame = 0
Query: 1 MTSSVLLERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQ 60
M S +L ER + + L I SR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +L++Q
Sbjct: 1 MYSLILRERSGSITGSLWNRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQ 60
Query: 61 EKQLYQARVRSEIRSKLVGVHET-SKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWN 120
EKQLY+AR+R+EIR+K+ G ++ K + S+ PMSP EHIK LA+RFMK GA D WN
Sbjct: 61 EKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWN 120
Query: 121 EYDGPLKTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLN 180
E DGP+K SR S+ + SPIDV+RL++ D G ++
Sbjct: 121 ENDGPVK-------KSDQGSRSGSDSIDSTSNSPIDVRRLVSATCDSM------GKNRVF 180
Query: 181 GDNLKGRSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNS 240
G + +G +S +SR F+RNESS + D +D++ PF+ K A + +K SR++
Sbjct: 181 GSSRRG--FSSMSR--FKRNESSCDEGDDFDAKKLDTLSPFSPKFAGTKEKVKSSRSVVG 240
Query: 241 VSNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCDMKMKR 300
V ++ +R KF +N SST++DS+EE G+ K +G +TGSSASLG D+K+ +
Sbjct: 241 VIRNKGLFGRR--KFRKNDSSTEEDSDEE-GDEGKMIGWMDMRKTGSSASLGNHDIKLTK 300
Query: 301 RVPLNPYNEESDFAEQVELLRYELSKKTAAE----------------------------- 360
RV N +EE + +R +LSK+ + +
Sbjct: 301 RVNRNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTL 360
Query: 361 EALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSN- 420
+ALS++G ++MTRVQ+ATLS CL+GKD LVK+KTG+GK +AFLLPAIE VLKA S
Sbjct: 361 KALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGV 420
Query: 421 QRVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQI 480
+V PI LILCP RELASQIAAE ALLK+HDGIGVQTL+GGTRFK DQ+RLES P QI
Sbjct: 421 NKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQI 480
Query: 481 IVATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSML 540
++ATPGRLLDH+EN+SGL+ RLM L + I+DEADLL+DLGFR+D+EKI+DCLPR+RQS+L
Sbjct: 481 LIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLL 540
Query: 541 FSATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKE 600
FSATIP+EVRR+SQLVLKR+H ++DT+GLGCVET +VRQSC++APHESHF +V HLLKE
Sbjct: 541 FSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKE 600
Query: 601 HISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLI 660
HI+ TPDYK FC+TGMVTSL + L REMK+NVRE+H+RKPQL+RTR+SDEF S RLI
Sbjct: 601 HINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLI 660
Query: 661 LVTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQ 720
LVTSDVSARGMNYP VTLV IQVGIPSDREQYIHRLGRTGREGK G+
Sbjct: 661 LVTSDVSARGMNYPDVTLV--------------IQVGIPSDREQYIHRLGRTGREGKGGE 720
Query: 721 GVLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYY 780
G+LLIAPWE YFLDELKDLPLE P P LDS +K +V++SMAKIDTSIKE AYHAWLGYY
Sbjct: 721 GLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYY 780
Query: 781 NSIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
NS+RE GRDKTTL EL +F SIGL+KPPALFR+TA+KMGLK I GI IRK
Sbjct: 781 NSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
BLAST of HG10009160 vs. TAIR 10
Match:
AT2G07750.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 867.8 bits (2241), Expect = 6.6e-252
Identity = 483/827 (58.40%), Postives = 599/827 (72.43%), Query Frame = 0
Query: 7 LERHRTFSSLLCKLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLIEQEKQLYQ 66
L + T L IFSR+MGGGPRTFPGGLNKWQWKRMHEK+A+EKE +L++QEKQLY+
Sbjct: 57 LSKRITSERSLWNRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116
Query: 67 ARVRSEIRSKLVGVHET-SKNSDPSTSYSPMSPSEHIKALANRFMKEGAIDLWNEYDGPL 126
AR+R+EIR+K+ G ++ K + S+ PMSP EHIK LA+RFMK GA DLWN+ DGP+
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176
Query: 127 KTPLPRPEMHGGSSRIASNVRSGSIRSPIDVKRLLTEKNDGFAGPQYTGVGKLNGDNLKG 186
K + GS + ++ S +PIDV+RL++ D +GK +
Sbjct: 177 K------KFDQGSRSCSDSIDS----TPIDVRRLVSATCD--------SMGKHRVLDSSR 236
Query: 187 RSYSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKSRNLNSVSNDRK 246
R +S +SR F+RNESS + D +D++ PF+ K + + +K S ++ V ++
Sbjct: 237 RGFSSMSR--FKRNESSCDEGDDVDAKKLDTLSPFSPKFSGTKEKVKSSTSVVGVIRNKG 296
Query: 247 AVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLR-TGSSASLGKCDMKMKRRVPLN 306
+R KF +N SST++DS+EE GN K +G W LR TGSSASLG D+K+ +RV N
Sbjct: 297 LFGRR--KFRKNDSSTEEDSDEE-GNEGKMIG-WMDLRKTGSSASLGNHDIKLTKRVNRN 356
Query: 307 PYNEESDFAEQVELLRYELSKKTAAE-----------------------------EALSS 366
+EE + +R +LSKK + + +ALS+
Sbjct: 357 VTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSA 416
Query: 367 AGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSN-QRVPP 426
+G V+MTRVQ+ATLS CL+GKD LVK+KTG+GK +AFLLPAIE VLKA S +V P
Sbjct: 417 SGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAP 476
Query: 427 ISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATP 486
I VLILCP RELASQIAAE ALLK HDGIGVQTL+GGTRF+ DQ+RLES P QI++ATP
Sbjct: 477 IFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATP 536
Query: 487 GRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATI 546
GRLLDH+EN+SGL+ RLM L + I+DEADLL+DLGF++D+EKI+DCLPR+RQS+LFSATI
Sbjct: 537 GRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATI 596
Query: 547 PREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCT 606
P+EVRR+SQLVLKR+H ++DT+GLGCVET +V+QSC++APHESHF +V HLLKEHI+
Sbjct: 597 PKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLKEHINNM 656
Query: 607 PDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSD 666
PDYK FC+TGMVTSL + L REMK+NVRE+H+RKPQL+RT +SDEF S RLILVTSD
Sbjct: 657 PDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSD 716
Query: 667 VSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLI 726
VSARGMNYP VTLV IQVGIPSDREQYIHRLGRTGREGK G+G+LLI
Sbjct: 717 VSARGMNYPDVTLV--------------IQVGIPSDREQYIHRLGRTGREGKGGKGLLLI 776
Query: 727 APWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRE 786
APWE YFLDELKDLPLE P P LDS +K +V++SMAKIDTSIKE AYHAWLGYYNS+RE
Sbjct: 777 APWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRE 836
Query: 787 IGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRIRK 800
GRDKTTL EL +F SIGL+KPPALFR+TA+KMGLK I GI IRK
Sbjct: 837 TGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
BLAST of HG10009160 vs. TAIR 10
Match:
AT5G08610.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 533.9 bits (1374), Expect = 2.2e-151
Identity = 299/634 (47.16%), Postives = 406/634 (64.04%), Query Frame = 0
Query: 179 NGDNLKGRS-YSVLSRRSFRRNESSSSDDDTDYNSGVDSIKPFANKLARSPDKNVKS--- 238
+G + +GRS +V S SFR + D + + D + D+NV+S
Sbjct: 236 SGSSFRGRSDRNVDSGSSFRGRSDRNVDSGSSFRGRNDRNVDSGSSFRGRNDRNVESGFR 295
Query: 239 RNLNSVSNDRKAVAQRKMKFWRNGSSTDDDSEEELGNVDKDLGSWKGLRTGSSASLGKCD 298
R S +N R + SS DD++ LGN+D DL S S +
Sbjct: 296 REPGSENNRGLGKQTRGLSLEEEDSSDDDENRVGLGNID-DLPS----EDSSDEDDENDE 355
Query: 299 MKMKRRVPLNPYNEESDFAEQVELLRYELSK--------KTAAEEALSSAGYVRMTRVQE 358
+K+ + E V+ LSK + +A+ AG+ MT VQE
Sbjct: 356 PLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQE 415
Query: 359 ATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQRVPPISVLILCPNREL 418
ATL + L+GKD L K+KTG+GK VAFLLPAIEAV+K+ +S + R PPI VL++CP REL
Sbjct: 416 ATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTREL 475
Query: 419 ASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQIIVATPGRLLDHVENRSG 478
ASQ AAEAN LLKYH IGVQ ++GGT+ +Q+R+++ P QI+VATPGRL DH+EN SG
Sbjct: 476 ASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSG 535
Query: 479 LSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLFSATIPREVRRISQLVL 538
+ RLMG+ +L+LDEAD L+D+GFR+DIE+I+ +P++RQ+ LFSAT+P EVR+I + L
Sbjct: 536 FATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVAL 595
Query: 539 KREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEHISCTPDYK--SFCTTG 598
KR+H F++ V G ET +V Q MIA + HF ++ LLKEHI+ DYK FCTT
Sbjct: 596 KRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTA 655
Query: 599 MVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLILVTSDVSARGMNYPAVT 658
MVT L L ++ +NVRE+HSRKPQ YRTR+SDEF +S+ +ILVTSDVSARG++YP V+
Sbjct: 656 MVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVS 715
Query: 659 LVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQGVLLIAPWEEYFLDELK 718
LV +Q+G+PSDREQYIHRLGRTGR+GKEG+GVLL+APWEEYF+ +K
Sbjct: 716 LV--------------VQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVK 775
Query: 719 DLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIREIGRDKTTLVELG 778
DLP+ + PLP +D +V++ +++++ KE AY AWLGYY S + I RD T LVEL
Sbjct: 776 DLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELA 835
Query: 779 KQFSESIGLQKPPALFRKTALKMGLKDIPGIRIR 799
+FS S+GL PPA+ + KMGLK++PG+R +
Sbjct: 836 NEFSRSMGLDSPPAIPKNVLGKMGLKNVPGLRTK 850
BLAST of HG10009160 vs. TAIR 10
Match:
AT5G63630.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )
HSP 1 Score: 522.7 bits (1345), Expect = 5.2e-148
Identity = 303/666 (45.50%), Postives = 416/666 (62.46%), Query Frame = 0
Query: 151 RSPIDVKRLLTEKNDGFAGPQYTGVGKLNGDNLKGRSYSVLSRRSFRRNESSSSDDDTDY 210
+S I+ + L+ GF G+ K + ++ + RS R +R + D +
Sbjct: 148 KSLIEDEEELSNWVSGFRTGSSRGILKSDDEDEEDRS---RGRNQEKRGIRNQVDSFRNK 207
Query: 211 NSGVDSIKPFANKL-ARSPDKNVKSRNLNSVSNDR---KAVAQRKMKFWRNGSSTDDDSE 270
G D + F +++ +S + + + R S S DR K + +R+ + SS +D
Sbjct: 208 RYGGDRERGFNSRIQGKSSEASFRGRKETSFSRDREDEKGLRKREDLRLEDESSDEDVKS 267
Query: 271 EELGNVDKDLGSWKGLRTGSSASLGKCDMKMKRRVPLNPYNEES------------DFAE 330
+G++ DL L D K+ V +++E+ +
Sbjct: 268 LVMGDIG-DL-----LSEDDEEEDQDYDFLKKKAVSAFGFDKENVIEADKTRNANDSYLT 327
Query: 331 QVELLRYELSKKTAAEEALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLL 390
+ Y LS + +A+ AGY MT VQEATL + L+GKD L K+KTG+GK VAFLL
Sbjct: 328 KTRFDHYPLSPLSL--KAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLL 387
Query: 391 PAIEAVLKAACSSSNQRVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTR 450
P+IE V+K+ +S + + PPI L++CP RELA+Q A EAN LLKYH IGVQ ++GGTR
Sbjct: 388 PSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTR 447
Query: 451 FKDDQKRLESVPSQIIVATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDI 510
+QKR+++ P QI+VATPGRL DH+EN G + RL G+ +L+LDEAD L+D+GFRKDI
Sbjct: 448 LGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDI 507
Query: 511 EKIVDCLPRRRQSMLFSATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIA 570
E+I+ +P+ RQ+ LFSAT+P EVR+I + L+R+H FV+ V G +ET QVRQ MIA
Sbjct: 508 ERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIA 567
Query: 571 PHESHFQIVCHLLKEHISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLY 630
+ HF ++ LL+EHI DYK FCTT MVT L L E+ +NVRE+HSRKPQ Y
Sbjct: 568 SLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSY 627
Query: 631 RTRISDEFNRSRRLILVTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQY 690
RTR+S+EF +S+ LILVTSDVSARG++YP VTLVL QVG+P DREQY
Sbjct: 628 RTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVL--------------QVGLPKDREQY 687
Query: 691 IHRLGRTGREGKEGQGVLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKID 750
IHRLGRTGR+GKEG+G+LL+APWEEYFL LKDLP+ + PLP +D KV++++ ++
Sbjct: 688 IHRLGRTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVE 747
Query: 751 TSIKEGAYHAWLGYYNSIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDI 799
KE AY AWLGYYNS + IGRDK LVEL +FS S+GL PPA+ + KMGLK++
Sbjct: 748 MRNKEAAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNV 788
BLAST of HG10009160 vs. TAIR 10
Match:
AT5G08620.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 512.7 bits (1319), Expect = 5.4e-145
Identity = 260/469 (55.44%), Postives = 342/469 (72.92%), Query Frame = 0
Query: 331 EALSSAGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKRVAFLLPAIEAVLKAACSSSNQ 390
+ + AG+ MT VQEATL L L+GKD L K+KTG+GK VAFLLP+IEAV+KA +S +
Sbjct: 93 KGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDN 152
Query: 391 RVPPISVLILCPNRELASQIAAEANALLKYHDGIGVQTLVGGTRFKDDQKRLESVPSQII 450
R PPI VL++CP RELA Q AAEAN LLKYH IGVQ ++GGT+ +Q+RL+ P QI+
Sbjct: 153 RHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQIL 212
Query: 451 VATPGRLLDHVENRSGLSVRLMGLTMLILDEADLLVDLGFRKDIEKIVDCLPRRRQSMLF 510
VATPGRL DH++N SG + RLMG+ +L+LDEAD L+D+GFR++IE+I+ +P++RQ+ LF
Sbjct: 213 VATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLF 272
Query: 511 SATIPREVRRISQLVLKREHVFVDTVGLGCVETPTQVRQSCMIAPHESHFQIVCHLLKEH 570
SAT+ EVR+I + LKR+H FV+ V G ET +V Q MIA + HF ++ LLK+H
Sbjct: 273 SATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKH 332
Query: 571 ISCTPDYK--SFCTTGMVTSLFHGLFREMKMNVREMHSRKPQLYRTRISDEFNRSRRLIL 630
I+ YK FCTT MVT L L ++ +NVRE+HSRKPQ YRTR+SDEF +S+ +IL
Sbjct: 333 ITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIIL 392
Query: 631 VTSDVSARGMNYPAVTLVLQQMLIILCNDHGNIQVGIPSDREQYIHRLGRTGREGKEGQG 690
VTSDVSARG++YP V+LV +Q+G+PSDREQYIHRLGRTGR+GKEG+G
Sbjct: 393 VTSDVSARGVDYPDVSLV--------------VQMGLPSDREQYIHRLGRTGRKGKEGEG 452
Query: 691 VLLIAPWEEYFLDELKDLPLERRPLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYN 750
VLL+APWEEYFL +KDLP+ + LP +D KV++ + +++ + KE AY AWLGYY
Sbjct: 453 VLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLGYYK 512
Query: 751 SIREIGRDKTTLVELGKQFSESIGLQKPPALFRKTALKMGLKDIPGIRI 798
S ++I RD T LVEL +FS S+GL PPA+ KMGLK++PGIR+
Sbjct: 513 SQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038875808.1 | 0.0e+00 | 87.44 | probable DEAD-box ATP-dependent RNA helicase 48 [Benincasa hispida] | [more] |
XP_022928821.1 | 0.0e+00 | 85.87 | probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita moschata] | [more] |
KAG7016956.1 | 0.0e+00 | 85.75 | putative DEAD-box ATP-dependent RNA helicase 48 [Cucurbita argyrosperma subsp. a... | [more] |
XP_023551234.1 | 0.0e+00 | 85.75 | probable DEAD-box ATP-dependent RNA helicase 48 isoform X1 [Cucurbita pepo subsp... | [more] |
XP_022969937.1 | 0.0e+00 | 84.76 | probable DEAD-box ATP-dependent RNA helicase 48 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9C8S9 | 1.4e-254 | 58.41 | Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 ... | [more] |
O80792 | 9.2e-251 | 58.40 | Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q6K7R9 | 6.7e-209 | 51.44 | DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 ... | [more] |
Q9FNM7 | 3.2e-150 | 47.16 | DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 P... | [more] |
Q9FFQ1 | 7.3e-147 | 45.50 | DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ELD4 | 0.0e+00 | 85.87 | probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1HXQ2 | 0.0e+00 | 84.76 | probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A1S3AT64 | 0.0e+00 | 85.32 | probable DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7TMI7 | 0.0e+00 | 85.20 | Putative DEAD-box ATP-dependent RNA helicase 48 OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A6J1DZQ8 | 0.0e+00 | 84.42 | probable DEAD-box ATP-dependent RNA helicase 48 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
AT1G63250.1 | 9.8e-256 | 58.41 | DEA(D/H)-box RNA helicase family protein | [more] |
AT2G07750.1 | 6.6e-252 | 58.40 | DEA(D/H)-box RNA helicase family protein | [more] |
AT5G08610.1 | 2.2e-151 | 47.16 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
AT5G63630.1 | 5.2e-148 | 45.50 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | [more] |
AT5G08620.1 | 5.4e-145 | 55.44 | DEA(D/H)-box RNA helicase family protein | [more] |