HG10009157 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009157
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	remorin-like
Location	Chr06: 3089252 .. 3090014 (+)
RNA-Seq Expression	HG10009157
Synteny	HG10009157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGATTTCAGATCCTGCTGAGAAAATTGATGCTGCAAAGGACAGAGGTAAAAAATAAAAAATTGAAAATCACCCTTTTCTTCTCATTTTCTTGTAATTATAACCCATAAAAGTGTTTCGTAAAAGTAGAAAATAAAATAAAGAAATTATTATGAAACTGAGTTGAAGATATCGTTTTCTGAGTTTCGTTTTTCTCAGATATTGCGTTGGCTCGGGTCGAATGGGAGAAGAAGATGGCATTGATCAAAGCATGGGAGGAGAGTGAAAAGATCAAAGCAGAGAATAAGTAGCATATAGAATTTTATCTATTTGTTGAAATTTGAATTGTATTTTCTTTTTTGAGTTTTTGAACATGTTTGGAATCTTTGGACAGGGCATACAAAAGGCTTTCTTCTGTTGAATCTTGGGAGAATACCAGAAAAGCCTCCATAGAAGCACAACTGATGAAGATAGAGGTAAATTGGATGTTGAAGAAGTATAGTTTTACAATTCTCACTGGTTAGTCTCCGGTTTCTCGGTACACGTTTTGAGATGTTTCGGTTTTTGTGAAATGAAAGGAAAAAATGGAGAAGAAGAAAGCGGAGTATGCTGAGCAAATGAAGAACAAAATCGTTGGAATTCACAAGGAGGGCGAAGAGAAGAAAGCAACCATTGAGGCAGAGCGAAAAGAACAGTTCCTCAAGGTCGAGGAAACCGCAGCAAAATATCGGACTTCGGGGTTCATCCCAAAGACCCTACTCAAATGCTTCAGTGGTTGA

mRNA sequence

ATGACAGAGATTTCAGATCCTGCTGAGAAAATTGATGCTGCAAAGGACAGAGATATTGCGTTGGCTCGGGTCGAATGGGAGAAGAAGATGGCATTGATCAAAGCATGGGAGGAGAGTGAAAAGATCAAAGCAGAGAATAAGGCATACAAAAGGCTTTCTTCTGTTGAATCTTGGGAGAATACCAGAAAAGCCTCCATAGAAGCACAACTGATGAAGATAGAGGAAAAAATGGAGAAGAAGAAAGCGGAGTATGCTGAGCAAATGAAGAACAAAATCGTTGGAATTCACAAGGAGGGCGAAGAGAAGAAAGCAACCATTGAGGCAGAGCGAAAAGAACAGTTCCTCAAGGTCGAGGAAACCGCAGCAAAATATCGGACTTCGGGGTTCATCCCAAAGACCCTACTCAAATGCTTCAGTGGTTGA

Coding sequence (CDS)

ATGACAGAGATTTCAGATCCTGCTGAGAAAATTGATGCTGCAAAGGACAGAGATATTGCGTTGGCTCGGGTCGAATGGGAGAAGAAGATGGCATTGATCAAAGCATGGGAGGAGAGTGAAAAGATCAAAGCAGAGAATAAGGCATACAAAAGGCTTTCTTCTGTTGAATCTTGGGAGAATACCAGAAAAGCCTCCATAGAAGCACAACTGATGAAGATAGAGGAAAAAATGGAGAAGAAGAAAGCGGAGTATGCTGAGCAAATGAAGAACAAAATCGTTGGAATTCACAAGGAGGGCGAAGAGAAGAAAGCAACCATTGAGGCAGAGCGAAAAGAACAGTTCCTCAAGGTCGAGGAAACCGCAGCAAAATATCGGACTTCGGGGTTCATCCCAAAGACCCTACTCAAATGCTTCAGTGGTTGA

Protein sequence

MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSGFIPKTLLKCFSG

Homology

[Close]

BLAST of HG10009157 vs. NCBI nr
Match: XP_008437238.1 (PREDICTED: uncharacterized protein At3g61260 isoform X2 [Cucumis melo] >KAA0042778.1 remorin isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 60
           MTEISD AEK+DAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWEN
Sbjct: 1   MTEISDSAEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWEN 60

Query: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 120
           TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEET
Sbjct: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEET 120

Query: 121 AAKYRTSGFIPKTLLKCFSG 141
           A KYRTSGFIPKTLLKCFSG
Sbjct: 121 AEKYRTSGFIPKTLLKCFSG 140

[Close]

BLAST of HG10009157 vs. NCBI nr
Match: XP_038876135.1 (remorin 1.4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 4.6e-62
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 60
           MTEISDPAEK D AKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWEN
Sbjct: 41  MTEISDPAEKSDIAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWEN 100

Query: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 120
           T+KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEE 
Sbjct: 101 TKKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEEA 160

Query: 121 AAKYRTSGFIPKTLLKCFSG 141
           AAKYRTSGFIPKTLLKCFSG
Sbjct: 161 AAKYRTSGFIPKTLLKCFSG 180

[Close]

BLAST of HG10009157 vs. NCBI nr
Match: XP_038876137.1 (remorin 1.4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 4.6e-62
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 60
           MTEISDPAEK D AKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWEN
Sbjct: 33  MTEISDPAEKSDIAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWEN 92

Query: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 120
           T+KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEE 
Sbjct: 93  TKKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEEA 152

Query: 121 AAKYRTSGFIPKTLLKCFSG 141
           AAKYRTSGFIPKTLLKCFSG
Sbjct: 153 AAKYRTSGFIPKTLLKCFSG 172

[Close]

BLAST of HG10009157 vs. NCBI nr
Match: XP_008437236.1 (PREDICTED: remorin isoform X1 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 6.7e-61
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 3   EISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTR 62
           +ISD AEK+DAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWENTR
Sbjct: 86  KISDSAEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTR 145

Query: 63  KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAA 122
           KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEETA 
Sbjct: 146 KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAE 205

Query: 123 KYRTSGFIPKTLLKCFSG 141
           KYRTSGFIPKTLLKCFSG
Sbjct: 206 KYRTSGFIPKTLLKCFSG 223

[Close]

BLAST of HG10009157 vs. NCBI nr
Match: XP_038876139.1 (remorin 1.4-like isoform X4 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60
Identity = 131/138 (94.93%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 3   EISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTR 62
           +ISDPAEK D AKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWENT+
Sbjct: 21  QISDPAEKSDIAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTK 80

Query: 63  KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAA 122
           KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEE AA
Sbjct: 81  KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEEAAA 140

Query: 123 KYRTSGFIPKTLLKCFSG 141
           KYRTSGFIPKTLLKCFSG
Sbjct: 141 KYRTSGFIPKTLLKCFSG 158

[Close]

BLAST of HG10009157 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-36
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 9   EKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEA 68
           EK + + +RD  LARVE EK+M+LIKAWEE+EK K ENKA K+LSS+ SWEN +KA++EA
Sbjct: 73  EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEA 132

Query: 69  QLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSG 128
           +L K+EE++EKKKAEY EQMKNKI  IHKE EEK+A IEA+R E+ LK EE AAKYR +G
Sbjct: 133 ELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATG 192

Query: 129 FIPKTLLKC 138
             PK L  C
Sbjct: 193 TAPKKLFGC 201

[Close]

BLAST of HG10009157 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-36
Identity = 78/132 (59.09%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 7   PAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASI 66
           PA+   A+ DRD+ LA +  EK+++ ++AWEESEK KAENKA K+++ V +WEN++KA++
Sbjct: 81  PAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAV 140

Query: 67  EAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRT 126
           EAQL KIEE++EKKKAEYAE+MKNK+  IHKE EE++A IEA+R E  LK EETAAKYR 
Sbjct: 141 EAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRA 200

Query: 127 SGFIPKTLLKCF 139
           +G +PK    CF
Sbjct: 201 TGIVPKATCGCF 212

[Close]

BLAST of HG10009157 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 82/138 (59.42%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 2   TEISDPA-EKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 61
           T+  +PA EK + + DRD  LARV  EK+++LIKAWEESEK KAENKA K++S++ +WEN
Sbjct: 61  TKAPEPADEKKEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWEN 120

Query: 62  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 121
           ++KA++EA+L K+EE++EKKKAEY E+MKNKI  +HKE EEK+A IEA+R E  LK EE 
Sbjct: 121 SKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEEL 180

Query: 122 AAKYRTSGFIPKTLLKCF 139
           AAKYR +G  PK +L  F
Sbjct: 181 AAKYRATGTAPKKILGIF 198

[Close]

BLAST of HG10009157 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.5e-34
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 7   PAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASI 66
           P +    + DRD+ LA +E EKK + IKAWEESEK KAEN+A K++S V +WEN++KA++
Sbjct: 59  PKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAV 118

Query: 67  EAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRT 126
           EAQL KIEEK+EKKKA+Y E+MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYR 
Sbjct: 119 EAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRA 178

Query: 127 SGFIPKTLLKCF 139
           +G +PK    CF
Sbjct: 179 TGVVPKATCGCF 190

[Close]

BLAST of HG10009157 vs. ExPASy Swiss-Prot
Match: P93758 (Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.1e-05
Identity = 34/109 (31.19%), Postives = 59/109 (54.13%), Query Frame = 0


Query: 23  RVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEAQLMKIEEKMEKKKA 82
           RV+ E+  A I AW+ ++  K  N+  +  + +  W N +     + + KIE K+E++KA
Sbjct: 157 RVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKA 216

Query: 83  EYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSGFIP 132
           +  E+ +N +    ++ EE++AT EA+R  +  KV E A   R  G  P
Sbjct: 217 KAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPP 265

[Close]

BLAST of HG10009157 vs. ExPASy TrEMBL
Match: A0A5A7TJ21 (Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002790 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.9e-63
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 60
           MTEISD AEK+DAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWEN
Sbjct: 1   MTEISDSAEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWEN 60

Query: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 120
           TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEET
Sbjct: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEET 120

Query: 121 AAKYRTSGFIPKTLLKCFSG 141
           A KYRTSGFIPKTLLKCFSG
Sbjct: 121 AEKYRTSGFIPKTLLKCFSG 140

[Close]

BLAST of HG10009157 vs. ExPASy TrEMBL
Match: A0A1S3AU31 (uncharacterized protein At3g61260 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.9e-63
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MTEISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWEN 60
           MTEISD AEK+DAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWEN
Sbjct: 1   MTEISDSAEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWEN 60

Query: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEET 120
           TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEET
Sbjct: 61  TRKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEET 120

Query: 121 AAKYRTSGFIPKTLLKCFSG 141
           A KYRTSGFIPKTLLKCFSG
Sbjct: 121 AEKYRTSGFIPKTLLKCFSG 140

[Close]

BLAST of HG10009157 vs. ExPASy TrEMBL
Match: A0A1S3AU46 (remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 3   EISDPAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTR 62
           +ISD AEK+DAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLS+VESWENTR
Sbjct: 86  KISDSAEKVDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSAVESWENTR 145

Query: 63  KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAA 122
           KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQ LKVEETA 
Sbjct: 146 KASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQCLKVEETAE 205

Query: 123 KYRTSGFIPKTLLKCFSG 141
           KYRTSGFIPKTLLKCFSG
Sbjct: 206 KYRTSGFIPKTLLKCFSG 223

[Close]

BLAST of HG10009157 vs. ExPASy TrEMBL
Match: A0A6J1DZS7 (remorin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 118/140 (84.29%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 3   EISDP-AEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENT 62
           EISDP A+K DA+KDRD+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLS+++SWE+ 
Sbjct: 39  EISDPSAQKTDASKDRDVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDG 98

Query: 63  RKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETA 122
           +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEKKA IEAER+EQ+LKVEETA
Sbjct: 99  KKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKKAAIEAERREQYLKVEETA 158

Query: 123 AKYRTSGFIPKT-LLKCFSG 141
           AKYR+SGF PK  LLKCFSG
Sbjct: 159 AKYRSSGFTPKNLLLKCFSG 178

[Close]

BLAST of HG10009157 vs. ExPASy TrEMBL
Match: A0A6J1E511 (remorin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 5.5e-53
Identity = 117/140 (83.57%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 3   EISDP-AEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENT 62
           +ISDP A+K DA+KDRD+ALARVEWEKK+ALIKAWEESEKIKAENKAYKRLS+++SWE+ 
Sbjct: 35  KISDPSAQKTDASKDRDVALARVEWEKKLALIKAWEESEKIKAENKAYKRLSAIDSWEDG 94

Query: 63  RKASIEAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETA 122
           +KASIEAQLMKIEEKMEKKKAEY E+MKNKIVGIHK+GEEKKA IEAER+EQ+LKVEETA
Sbjct: 95  KKASIEAQLMKIEEKMEKKKAEYVEEMKNKIVGIHKQGEEKKAAIEAERREQYLKVEETA 154

Query: 123 AKYRTSGFIPKT-LLKCFSG 141
           AKYR+SGF PK  LLKCFSG
Sbjct: 155 AKYRSSGFTPKNLLLKCFSG 174

[Close]

BLAST of HG10009157 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 9   EKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEA 68
           EK + + +RD  LARVE EK+M+LIKAWEE+EK K ENKA K+LSS+ SWEN +KA++EA
Sbjct: 73  EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEA 132

Query: 69  QLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSG 128
           +L K+EE++EKKKAEY EQMKNKI  IHKE EEK+A IEA+R E+ LK EE AAKYR +G
Sbjct: 133 ELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATG 192

Query: 129 FIPKTLLKC 138
             PK L  C
Sbjct: 193 TAPKKLFGC 201

[Close]

BLAST of HG10009157 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 9   EKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEA 68
           EK + + +RD  LARVE EK+M+LIKAWEE+EK K ENKA K+LSS+ SWEN +KA++EA
Sbjct: 72  EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEA 131

Query: 69  QLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSG 128
           +L K+EE++EKKKAEY EQMKNKI  IHKE EEK+A IEA+R E+ LK EE AAKYR +G
Sbjct: 132 ELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATG 191

Query: 129 FIPKTLLKC 138
             PK L  C
Sbjct: 192 TAPKKLFGC 200

[Close]

BLAST of HG10009157 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 152.5 bits (384), Expect = 2.5e-37
Identity = 78/132 (59.09%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 7   PAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASI 66
           PA+   A+ DRD+ LA +  EK+++ ++AWEESEK KAENKA K+++ V +WEN++KA++
Sbjct: 81  PAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAV 140

Query: 67  EAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRT 126
           EAQL KIEE++EKKKAEYAE+MKNK+  IHKE EE++A IEA+R E  LK EETAAKYR 
Sbjct: 141 EAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRA 200

Query: 127 SGFIPKTLLKCF 139
           +G +PK    CF
Sbjct: 201 TGIVPKATCGCF 212

[Close]

BLAST of HG10009157 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 145.2 bits (365), Expect = 3.9e-35
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 7   PAEKIDAAKDRDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASI 66
           P +    + DRD+ LA +E EKK + IKAWEESEK KAEN+A K++S V +WEN++KA++
Sbjct: 59  PKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAV 118

Query: 67  EAQLMKIEEKMEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRT 126
           EAQL KIEEK+EKKKA+Y E+MKNK+  IHK  EEK+A +EA++ E+ LK EE  AKYR 
Sbjct: 119 EAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRA 178

Query: 127 SGFIPKTLLKCF 139
           +G +PK    CF
Sbjct: 179 TGVVPKATCGCF 190

[Close]

BLAST of HG10009157 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.1e-32
Identity = 74/122 (60.66%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 17  RDIALARVEWEKKMALIKAWEESEKIKAENKAYKRLSSVESWENTRKASIEAQLMKIEEK 76
           RD  L R+E +K+++LIKAWEE+EK K ENKA K++SSV +WEN++KAS+EA+L KIEE+
Sbjct: 54  RDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQ 113

Query: 77  MEKKKAEYAEQMKNKIVGIHKEGEEKKATIEAERKEQFLKVEETAAKYRTSGFIPKTLLK 136
           + KKKA Y EQMKNKI  IHKE EEK+A  EA+R E  LK EE AAKYR +G  P  L  
Sbjct: 114 LNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFG 173

Query: 137 CF 139
            F
Sbjct: 174 FF 175

The following BLAST results are available for this feature:

BLAST of HG10009157 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437238.1	1.2e-62	96.43	PREDICTED: uncharacterized protein At3g61260 isoform X2 [Cucumis melo] >KAA00427...	[more]
XP_038876135.1	4.6e-62	95.71	remorin 1.4-like isoform X1 [Benincasa hispida]	[more]
XP_038876137.1	4.6e-62	95.71	remorin 1.4-like isoform X2 [Benincasa hispida]	[more]
XP_008437236.1	6.7e-61	95.65	PREDICTED: remorin isoform X1 [Cucumis melo]	[more]
XP_038876139.1	1.9e-60	94.93	remorin 1.4-like isoform X4 [Benincasa hispida]	[more]

BLAST of HG10009157 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	2.0e-36	64.34	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	3.5e-36	59.09	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
P93788	1.5e-34	59.42	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
O80837	5.5e-34	56.82	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
P93758	7.1e-05	31.19	Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1	[more]

BLAST of HG10009157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TJ21	5.9e-63	96.43	Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00...	[more]
A0A1S3AU31	5.9e-63	96.43	uncharacterized protein At3g61260 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A1S3AU46	3.2e-61	95.65	remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482726 PE=3 SV=1	[more]
A0A6J1DZS7	1.9e-53	84.29	remorin-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1	[more]
A0A6J1E511	5.5e-53	83.57	remorin-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026108 PE=3 SV=1	[more]

BLAST of HG10009157 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	1.4e-37	64.34	Remorin family protein	[more]
AT5G23750.2	1.4e-37	64.34	Remorin family protein	[more]
AT3G61260.1	2.5e-37	59.09	Remorin family protein	[more]
AT2G45820.1	3.9e-35	56.82	Remorin family protein	[more]
AT3G48940.1	4.1e-32	60.66	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..90
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 5..139
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 5..139
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 28..132 e-value: 7.8E-28 score: 96.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009157.1	HG10009157.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress
cellular_component	GO:0016021	integral component of membrane