HG10009138 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009138
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Tubulin beta chain
Location	Chr06: 2890183 .. 2891191 (+)
RNA-Seq Expression	HG10009138
Synteny	HG10009138

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGTATGACTGAGATTTTTCTTTAATGTTCTTCATTTCTGGGGCCATTTGAATAGGAAGAAGTTAACAAATGCTCCTTAGAGAATGAAAGAACTTTGTTTGGTGTATTGAGATGAATCGAAATTATTGTGAATGTGGATTGATTCTATAATCTAAAGCTGAAAAGTAGGTGGTGTTCTATTGTAGTTTAACATTAACTTATCAATACATATAATGATGGTCAATTAAACAGACTCTTATATTTGTGAATAGAAGTGTTTAACACAAAGGTTTAACTCTAATCTTGGTTTGAATGTATGGTTGTGTGAGACAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTGTAAGTCTCTTTCTCAATATCACATTCTTGTCTAA

mRNA sequence

ATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTGTAAGTCTCTTTCTCAATATCACATTCTTGTCTAA

Coding sequence (CDS)

ATGAGAGAAATCCTCCATATTCAAGCAGGACAGTGTGGAAACCAAATTGGGGCTAAATTTTGGGAAGTTGTTTGTGATGAACATGGGATCGATCCCACTGGAAATTACACAGGAAGTAGTAACCTTCAACTCGAGAGAGTTAATGTTTACTACAACGAAGCGAGTGGTGGCCGATATGTTCCAAGGGCTGTTTTGGTTGACCTTGAACCAGGAACCATGGACAGCCTCAGGACAGGTCCTTATGGGAATATATTTAGACCTGATAACTTTGTTTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAGGGCCATTACACTGAAGGAGCTGAACTGGTTGATTCTGTTCTTGATGTGGTTCGCAAAGAAGCTGAGAATTGTGACTGTTTACAAGGGTTTCAAGTTTGCCATTCACTTGGAGGAGGGACTGGATCTGGAATGGGAACATTATTGATATCAAAGATCAGGGAAGAGTATCCTGACAGGATGATGTTAACTTTCTCTGTCTTCCCCTCACCTAAGGTCTCAGATACAGTGGTTGAGCCCTATAATGCCACTCTCTCTGTGCACCAGTTGGTTGAAAATGCTGATGAATGCATGGTTTTGGATAATGAAGCACTCTATGATATCTGCTTTAGGACCCTCAAGCTCACCAATCCAAGTTGTAAGTCTCTTTCTCAATATCACATTCTTGTCTAA

Protein sequence

MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYVPRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLSQYHILV

Homology

[Close]

BLAST of HG10009138 vs. NCBI nr
Match: XP_038875501.1 (tubulin beta chain-like [Benincasa hispida])

HSP 1 Score: 467.2 bits (1201), Expect = 8.1e-128
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. NCBI nr
Match: XP_022958255.1 (tubulin beta chain-like [Cucurbita moschata] >XP_022995254.1 tubulin beta chain-like [Cucurbita maxima] >XP_023533713.1 tubulin beta chain-like [Cucurbita pepo subsp. pepo] >KAG6606097.1 Tubulin beta-1 chain, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036043.1 Tubulin beta-1 chain [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 465.3 bits (1196), Expect = 3.1e-127
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILH+QAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG+SNLQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. NCBI nr
Match: XP_023522756.1 (tubulin beta chain-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.3 bits (1196), Expect = 3.1e-127
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILH+QAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG+SNLQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. NCBI nr
Match: XP_004143909.2 (tubulin beta chain [Cucumis sativus] >KGN50101.1 hypothetical protein Csa_000672 [Cucumis sativus])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. NCBI nr
Match: XP_008437269.1 (PREDICTED: tubulin beta chain-like [Cucumis melo] >KAA0042760.1 tubulin beta chain-like [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy Swiss-Prot
Match: Q9ZPN9 (Tubulin beta-2 chain OS=Eleusine indica OX=29674 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 210/226 (92.92%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy Swiss-Prot
Match: Q9ZRB1 (Tubulin beta-2 chain OS=Triticum aestivum OX=4565 GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 210/226 (92.92%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy Swiss-Prot
Match: P45960 (Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 210/226 (92.92%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy Swiss-Prot
Match: Q41783 (Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 210/226 (92.92%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy Swiss-Prot
Match: P93176 (Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-124
Identity = 210/226 (92.92%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVCDEHGIDPTG YTG+S+LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy TrEMBL
Match: A0A6J1K569 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111490856 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILH+QAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG+SNLQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy TrEMBL
Match: A0A6J1H301 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111459535 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILH+QAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG+SNLQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHLQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGTSNLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy TrEMBL
Match: A0A5A7THJ1 (Tubulin beta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002600 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.6e-127
Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy TrEMBL
Match: A0A0A0KQW7 (Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_5G153160 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.6e-127
Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. ExPASy TrEMBL
Match: A0A1S3ATL6 (Tubulin beta chain OS=Cucumis melo OX=3656 GN=LOC103482745 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 5.6e-127
Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQAGQCGNQIGAKFWEVVCDEHGIDP GNYTGSS+LQLERVNVYYNEASGGRYV
Sbjct: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPAGNYTGSSSLQLERVNVYYNEASGGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLN 226

[Close]

BLAST of HG10009138 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-124
Identity = 207/226 (91.59%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIG+KFWEVVCDEHGIDPTG Y G+S+LQLERVNVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRA+L+DLEPGTMDS+RTGPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-123
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-123
Identity = 207/226 (91.59%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGIDPTG YTG S+LQLER+NVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDSLR+GPYG  FRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

[Close]

BLAST of HG10009138 vs. TAIR 10
Match: AT1G75780.1 (tubulin beta-1 chain )

HSP 1 Score: 438.0 bits (1125), Expect = 4.9e-123
Identity = 203/227 (89.43%), Postives = 218/227 (96.04%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTG-SSNLQLERVNVYYNEASGGRY 60
           MREILH+Q GQCGNQIG+KFWEV+CDEHG+DPTG Y G S++LQLER+NVYYNEASGGRY
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 61  VPRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDV 120
           VPRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ PS   L+
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLN 227

[Close]

BLAST of HG10009138 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 434.5 bits (1116), Expect = 5.4e-122
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   MREILHIQAGQCGNQIGAKFWEVVCDEHGIDPTGNYTGSSNLQLERVNVYYNEASGGRYV 60
           MREILHIQ GQCGNQIGAKFWEVVC EHGID TG Y G ++LQLERVNVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLVDLEPGTMDSLRTGPYGNIFRPDNFVFGQNGAGNNWAKGHYTEGAELVDSVLDVV 120
           PRAVL+DLEPGTMDS+R+GPYG IFRPDNFVFGQ+GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSCKSLS 227
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PS   L+
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226

The following BLAST results are available for this feature:

BLAST of HG10009138 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875501.1	8.1e-128	98.23	tubulin beta chain-like [Benincasa hispida]	[more]
XP_022958255.1	3.1e-127	97.35	tubulin beta chain-like [Cucurbita moschata] >XP_022995254.1 tubulin beta chain-...	[more]
XP_023522756.1	3.1e-127	97.35	tubulin beta chain-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_004143909.2	1.2e-126	97.35	tubulin beta chain [Cucumis sativus] >KGN50101.1 hypothetical protein Csa_000672...	[more]
XP_008437269.1	1.2e-126	97.35	PREDICTED: tubulin beta chain-like [Cucumis melo] >KAA0042760.1 tubulin beta cha...	[more]

BLAST of HG10009138 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPN9	2.5e-124	92.92	Tubulin beta-2 chain OS=Eleusine indica OX=29674 GN=TUBB2 PE=2 SV=1	[more]
Q9ZRB1	2.5e-124	92.92	Tubulin beta-2 chain OS=Triticum aestivum OX=4565 GN=TUBB2 PE=2 SV=1	[more]
P45960	2.5e-124	92.92	Tubulin beta-4 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB4 PE=2 SV=1	[more]
Q41783	2.5e-124	92.92	Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1	[more]
P93176	2.5e-124	92.92	Tubulin beta chain OS=Hordeum vulgare OX=4513 GN=TUBB PE=2 SV=1	[more]

BLAST of HG10009138 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K569	1.5e-127	97.35	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111490856 PE=3 SV=1	[more]
A0A6J1H301	1.5e-127	97.35	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111459535 PE=3 SV=1	[more]
A0A5A7THJ1	5.6e-127	97.35	Tubulin beta chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00...	[more]
A0A0A0KQW7	5.6e-127	97.35	Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_5G153160 PE=3 SV=1	[more]
A0A1S3ATL6	5.6e-127	97.35	Tubulin beta chain OS=Cucumis melo OX=3656 GN=LOC103482745 PE=3 SV=1	[more]

BLAST of HG10009138 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12250.1	1.5e-124	91.59	beta-6 tubulin	[more]
AT5G62690.1	1.3e-123	91.59	tubulin beta chain 2	[more]
AT5G62700.1	1.3e-123	91.59	tubulin beta chain 3	[more]
AT1G75780.1	4.9e-123	89.43	tubulin beta-1 chain	[more]
AT5G23860.1	5.4e-122	90.71	tubulin beta 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 108..126 score: 88.12 coord: 152..164 score: 91.43 coord: 41..58 score: 74.79 coord: 88..99 score: 87.95 coord: 212..224 score: 60.75
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 93..104 score: 72.69 coord: 151..172 score: 59.63 coord: 51..70 score: 69.96 coord: 132..150 score: 79.04 coord: 190..210 score: 67.82 coord: 176..189 score: 79.11 coord: 106..130 score: 70.76 coord: 10..30 score: 72.97
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..226
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..221 e-value: 8.1E-50 score: 181.5
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 1.2E-70 score: 237.7
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..231 e-value: 1.6E-112 score: 377.3
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..228
None	No IPR available	PANTHER	PTHR11588:SF351	TUBULIN BETA-2 CHAIN	coord: 1..226
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..221 e-value: 6.37183E-155 score: 434.687
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009138.1	HG10009138.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton