
HG10009129 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTGAAGGTTTGAGAAAACTGAGGTTTCTGGTGTTTGTAGTGTCTGTTGTTGTTCTAGGTGTAGATGCTTTCACACAATTCCAAATGTTGTCTGAAGAAGAGTTGGAACTCAACAACCTTCATAAGTCATTGGTAAGCACCCAAGATGCGGAAGTTTTGCAAAACTAGGGGTAGAGGTCTTTCTAGGATCCCTTCAAACGCTCACAACTAAGACTAACTTAAAGATTAATTCCAACAAAGAGCTTAGTTAGAAGGATGAATAACCCAAGATCAAACTTAGAATCTACTAGAACATTTTAATCTTTTATACATATTCTTAACAATCCTCCCCCAGCTAACGAGCGCTATAATTGTCCGCTTGTAGGATGCGAACACGGGGAACTGGTTGTTCATGTTTGGAGACAAATACATTGGGTACTGGCCAAAGGGACTGCTGCCAGGCTTGGAAAATGGAGCAGCCATTGCAGCATGGGGAGGGGAAGTTTACAGCCCTACAACAGAAGCAGGGCCAGCCATGGGGAGTGGCCATTTTCCTGAAGAGGGTTACAGAAAAAGTGCTTTTGTGAATCAGATTCAAGTGGCAGAGTATAGTTCATTGGAATTTGTTGATCCAGTGGGTTCGCAGCTCAGTATTGTTTTGGACAAACCTGTCTGTTTTGGGCTCATTAATAAGTTTACTCAAGCTGGGAACTGGGGGCATCATATCTTCTTTGGATGGCCAAGAGGAAAACTGATTCTATGGGCAAAAATAAAATAA ATGGATGGTGAAGGTTTGAGAAAACTGAGGTTTCTGGTGTTTGTAGTGTCTGTTGTTGTTCTAGGTGTAGATGCTTTCACACAATTCCAAATGTTGTCTGAAGAAGAGTTGGAACTCAACAACCTTCATAAGTCATTGGATGCGAACACGGGGAACTGGTTGTTCATGTTTGGAGACAAATACATTGGGTACTGGCCAAAGGGACTGCTGCCAGGCTTGGAAAATGGAGCAGCCATTGCAGCATGGGGAGGGGAAGTTTACAGCCCTACAACAGAAGCAGGGCCAGCCATGGGGAGTGGCCATTTTCCTGAAGAGGGTTACAGAAAAAGTGCTTTTGTGAATCAGATTCAAGTGGCAGAGTATAGTTCATTGGAATTTGTTGATCCAGTGGGTTCGCAGCTCAGTATTGTTTTGGACAAACCTGTCTGTTTTGGGCTCATTAATAAGTTTACTCAAGCTGGGAACTGGGGGCATCATATCTTCTTTGGATGGCCAAGAGGAAAACTGATTCTATGGGCAAAAATAAAATAA ATGGATGGTGAAGGTTTGAGAAAACTGAGGTTTCTGGTGTTTGTAGTGTCTGTTGTTGTTCTAGGTGTAGATGCTTTCACACAATTCCAAATGTTGTCTGAAGAAGAGTTGGAACTCAACAACCTTCATAAGTCATTGGATGCGAACACGGGGAACTGGTTGTTCATGTTTGGAGACAAATACATTGGGTACTGGCCAAAGGGACTGCTGCCAGGCTTGGAAAATGGAGCAGCCATTGCAGCATGGGGAGGGGAAGTTTACAGCCCTACAACAGAAGCAGGGCCAGCCATGGGGAGTGGCCATTTTCCTGAAGAGGGTTACAGAAAAAGTGCTTTTGTGAATCAGATTCAAGTGGCAGAGTATAGTTCATTGGAATTTGTTGATCCAGTGGGTTCGCAGCTCAGTATTGTTTTGGACAAACCTGTCTGTTTTGGGCTCATTAATAAGTTTACTCAAGCTGGGAACTGGGGGCATCATATCTTCTTTGGATGGCCAAGAGGAAAACTGATTCTATGGGCAAAAATAAAATAA MDGEGLRKLRFLVFVVSVVVLGVDAFTQFQMLSEEELELNNLHKSLDANTGNWLFMFGDKYIGYWPKGLLPGLENGAAIAAWGGEVYSPTTEAGPAMGSGHFPEEGYRKSAFVNQIQVAEYSSLEFVDPVGSQLSIVLDKPVCFGLINKFTQAGNWGHHIFFGWPRGKLILWAKIK Homology
BLAST of HG10009129 vs. NCBI nr
Match: XP_022158434.1 (uncharacterized protein LOC111024921 [Momordica charantia]) HSP 1 Score: 208.8 bits (530), Expect = 3.9e-50 Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0
BLAST of HG10009129 vs. NCBI nr
Match: XP_042950336.1 (uncharacterized protein LOC122282452, partial [Carya illinoinensis]) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-31 Identity = 62/117 (52.99%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of HG10009129 vs. NCBI nr
Match: KAG7956575.1 (hypothetical protein I3843_11G130800, partial [Carya illinoinensis]) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-31 Identity = 62/117 (52.99%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of HG10009129 vs. NCBI nr
Match: KAG6688596.1 (hypothetical protein I3842_11G133000 [Carya illinoinensis]) HSP 1 Score: 146.4 bits (368), Expect = 2.4e-31 Identity = 62/117 (52.99%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of HG10009129 vs. NCBI nr
Match: XP_040986169.1 (uncharacterized protein LOC121234329 isoform X2 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 146.0 bits (367), Expect = 3.1e-31 Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0
BLAST of HG10009129 vs. ExPASy TrEMBL
Match: A0A6J1DZE3 (uncharacterized protein LOC111024921 OS=Momordica charantia OX=3673 GN=LOC111024921 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50 Identity = 95/130 (73.08%), Postives = 112/130 (86.15%), Query Frame = 0
BLAST of HG10009129 vs. ExPASy TrEMBL
Match: A0A2I4H8L6 (uncharacterized protein LOC109014471 isoform X1 OS=Juglans regia OX=51240 GN=LOC109014471 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of HG10009129 vs. ExPASy TrEMBL
Match: A0A6P9E585 (uncharacterized protein LOC109014471 isoform X2 OS=Juglans regia OX=51240 GN=LOC109014471 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29 Identity = 60/117 (51.28%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of HG10009129 vs. ExPASy TrEMBL
Match: A0A2N9FVS7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19127 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 9.2e-29 Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of HG10009129 vs. ExPASy TrEMBL
Match: A0A2P5EGA7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_196420 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 0
BLAST of HG10009129 vs. TAIR 10
Match: AT4G23390.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 102.1 bits (253), Expect = 4.8e-22 Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of HG10009129 vs. TAIR 10
Match: AT2G20170.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of HG10009129 vs. TAIR 10
Match: AT2G20170.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of HG10009129 vs. TAIR 10
Match: AT2G20170.3 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21 Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of HG10009129 vs. TAIR 10
Match: AT4G23350.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 92.8 bits (229), Expect = 2.9e-19 Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|