HG10009116 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009116
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CCT domain-containing protein
Location	Chr06: 2643673 .. 2645532 (+)
RNA-Seq Expression	HG10009116
Synteny	HG10009116

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGCTTATCGCTTTCTCATGCCACCGATTTCCATCTCCTCCCTGATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAATCTCTCCAATTTCGATGTCAAAAGCGAAGAATCCCATCTGGGTTTCACCTCTAACGCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTTTGAAAATGCCGCTGCCACAGCCGCCGTCGTCGACAAATCCTTGCTCCTCCATAGAAGCTTCAGTGAAAAACCCGGGTTCCAATCCTGCCTCGAATCTCTCTTAATGGAATCCTCAGATTTCCCCAATAATCATCAGTCTCTTCCCTGCCCTGAATCCGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGAGATTTACAGGTTTTCATCTCTCTGTTTTTCATTATACTCTGTTTCTTTTTCTTAAAATGTTAAAATTTGTGATTTAATTAATGTCCGGGGGCAGAATTCTGGGATGGGGAGGTCGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGAATATCGAAATACAGAGCAAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGGTTAGAAATTAAAAGAAAGATTAATAGAAATTGTTAAGAAGATTAATGAAAGTGAATTTGTGGTTTATGGTAACAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGGTACAATTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGTTTGAGTGAGTGAATTTTTTTCGGGATATTTCCACATCAGCTGTTAAACAGCTGAGGTGGCAACAAAGAACTGAGATTCTCTCTTTGAAATTTTCAAATTTTGCCACCTCATCTCAATTTTAGGAACTTCAGATTTAAAATTTTGGAAGTTAAAAATTAAATCTCATTTTTAAATTTTAAATTTTCTAAACTTTTAAAATGACGGTTTTGAGTTAATTTCTTTTATCTAAAATTTCAAAATAACTATCTTAGTTCTAAAATTAAAAAAAAAACATTTTATTTTAAAAAATTGAAAAATGTGAAACTATTTACAGAAAATAATAATAATAATAATAAAAAAAAAACTCTATCACTGAAACTATCTCAAAACTAAAAATTGTTATTTTGTGTAAATAGTTTTCTTATATTTAGTTTGAAATTATGTACTAACAGACTAAAATTCAAAATATATAATTGAAGCCAAGTCATTACTTTATTAAAATTAAGAATCAAAATAGTTTTTTAAAATGATAAAAAAAATAATTAATTTTTAAAATATAAAACAGTAATGAAAGTAGACCTTTTGAAAACTTGAATACAAACATACAACAAACTCAAAAGTTTGAATTAAAATAGATATTTTGAAAGTTCAAAATATTTATGGACTAAAATAAAATTTAAACTTAAAACTATTTTGCCATATTTCCATCCTTAACTCAAGTGATTAGGTATTATCTTCGTTTGAGTTCGTTTGCAAAAATAGTTCAACTAGTTAAGGCAGTTCGAATCATATTTTCATTTTTTTAAACTCAAGTAAAATAAAAACAATAAATTTTGTCATTTCTTATGGAAATTTATTTATGTTTTTCTATTTCAAAATTACAATTGTTTTTTTTTTAATTTTTTTTATTTGAATGCAGATTGAAGGATTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCAATATTGTGGATTTTAA

mRNA sequence

ATGCAGGGCTTATCGCTTTCTCATGCCACCGATTTCCATCTCCTCCCTGATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAATCTCTCCAATTTCGATGTCAAAAGCGAAGAATCCCATCTGGGTTTCACCTCTAACGCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTTTGAAAATGCCGCTGCCACAGCCGCCGTCGTCGACAAATCCTTGCTCCTCCATAGAAGCTTCAGTGAAAAACCCGGGTTCCAATCCTGCCTCGAATCTCTCTTAATGGAATCCTCAGATTTCCCCAATAATCATCAGTCTCTTCCCTGCCCTGAATCCGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGAGATTTACAGAATTCTGGGATGGGGAGGTCGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGAATATCGAAATACAGAGCAAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGATTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCAATATTGTGGATTTTAA

Coding sequence (CDS)

ATGCAGGGCTTATCGCTTTCTCATGCCACCGATTTCCATCTCCTCCCTGATCCTTCTTCTTCTTCCTCAAATGGGTTTCAAAATCTCTCCAATTTCGATGTCAAAAGCGAAGAATCCCATCTGGGTTTCACCTCTAACGCCTCCTTCAATCAACCTCTCTGTTTCGAACCTCCTTTTGAAAATGCCGCTGCCACAGCCGCCGTCGTCGACAAATCCTTGCTCCTCCATAGAAGCTTCAGTGAAAAACCCGGGTTCCAATCCTGCCTCGAATCTCTCTTAATGGAATCCTCAGATTTCCCCAATAATCATCAGTCTCTTCCCTGCCCTGAATCCGACTTTTTCTCCTCACAAATCCGACGCGTCTTTAGCACCGGAGATTTACAGAATTCTGGGATGGGGAGGTCGGAGAATGGAAGCTCGTTAATGGAGGAAGGGAATTTCAAAGTGGGAAGATACAGTGCAGAGGAGAGAAAAGAGAGAATATCGAAATACAGAGCAAAAAGAACGCAGAGAAATTTCAACAAGACGATAAAGTATGCATGTCGGAAAACGCTAGCCGACAACCGGCCGAGAATACGTGGCAGATTTGCACGCAATGACGAGCCTGGAGAGATTCCCAAAGCTGCATGTTCAACCAGGGAAGAAGACGAAGATGATTTCTGGATTGAAGGATTGCATGCAGGTGAAGAAGAAGGAACAATGAGAGGAAAGCAATATGGTGAAGTGTACGGACGAATGCAATTTCAATATTGTGGATTTTAA

Protein sequence

MQGLSLSHATDFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPFENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGKQYGEVYGRMQFQYCGF

Homology

[Close]

BLAST of HG10009116 vs. NCBI nr
Match: XP_038874875.1 (uncharacterized protein LOC120067375 [Benincasa hispida])

HSP 1 Score: 444.1 bits (1141), Expect = 8.0e-121
Identity = 233/255 (91.37%), Postives = 236/255 (92.55%), Query Frame = 0


Query: 1   MQGLSLSHATDFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPFE 60
           MQGLSLSH TDFHLL  PSSSSSNGFQNLSNFDVKSEES LG      FNQPLCF+PP E
Sbjct: 77  MQGLSLSHPTDFHLLSHPSSSSSNGFQNLSNFDVKSEESLLG------FNQPLCFDPPSE 136

Query: 61  NAA-ATA-AVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQI 120
           NAA ATA AVVDKSLLLHRSFSEKPGFQS LESLLMES +FPNNH SLPCPESDFFSSQI
Sbjct: 137 NAATATATAVVDKSLLLHRSFSEKPGFQSRLESLLMESPNFPNNHHSLPCPESDFFSSQI 196

Query: 121 RRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIK 180
           RRVFSTGDLQNSGMGR ENGSSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIK
Sbjct: 197 RRVFSTGDLQNSGMGRMENGSSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIK 256

Query: 181 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGKQ 240
           YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH GEEEGTMRGKQ
Sbjct: 257 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGGEEEGTMRGKQ 316

Query: 241 YGEVYGRMQFQYCGF 254
           +GEVYGRMQFQYCGF
Sbjct: 317 FGEVYGRMQFQYCGF 325

[Close]

BLAST of HG10009116 vs. NCBI nr
Match: XP_011654732.1 (two-component response regulator-like APRR5 [Cucumis sativus] >KAE8647851.1 hypothetical protein Csa_000322 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 4.2e-106
Identity = 213/255 (83.53%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DF LLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLCF+PP 
Sbjct: 84  MQGLSLSHPTPDFPLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCFDPP- 143

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES +FPNNH SLPCPESDFFSSQIR
Sbjct: 144 EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQNFPNNHHSLPCPESDFFSSQIR 203

Query: 121 RVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKY 180
           RVFSTGDLQNSG GRS   SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIKY
Sbjct: 204 RVFSTGDLQNSGNGRS---SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKY 263

Query: 181 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GKQ 240
           ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GKQ
Sbjct: 264 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQ 322

Query: 241 YGEVYGRMQFQYCGF 254
           YGE+YGRMQFQYCGF
Sbjct: 324 YGEMYGRMQFQYCGF 322

[Close]

BLAST of HG10009116 vs. NCBI nr
Match: XP_008437312.1 (PREDICTED: uncharacterized protein LOC103482769 isoform X2 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 6.1e-105
Identity = 211/255 (82.75%), Postives = 218/255 (85.49%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DFHLLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLC   P 
Sbjct: 83  MQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCSLDPP 142

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES  FPNNH SLPCPESDFFSSQIR
Sbjct: 143 EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQKFPNNHHSLPCPESDFFSSQIR 202

Query: 121 RVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKY 180
           RVFSTGDLQNSG GR    SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIKY
Sbjct: 203 RVFSTGDLQNSGNGR----SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKY 262

Query: 181 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GKQ 240
           ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GKQ
Sbjct: 263 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQ 321

Query: 241 YGEVYGRMQFQYCGF 254
           YGE+YGRMQFQYCGF
Sbjct: 323 YGEMYGRMQFQYCGF 321

[Close]

BLAST of HG10009116 vs. NCBI nr
Match: XP_008437311.1 (PREDICTED: uncharacterized protein LOC103482769 isoform X1 [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 1.5e-103
Identity = 211/256 (82.42%), Postives = 218/256 (85.16%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DFHLLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLC   P 
Sbjct: 83  MQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCSLDPP 142

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES  FPNNH SLPCPESDFFSSQIR
Sbjct: 143 EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQKFPNNHHSLPCPESDFFSSQIR 202

Query: 121 RVFSTGDL-QNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIK 180
           RVFSTGDL QNSG GR    SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIK
Sbjct: 203 RVFSTGDLQQNSGNGR----SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIK 262

Query: 181 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GK 240
           YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GK
Sbjct: 263 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGK 322

Query: 241 QYGEVYGRMQFQYCGF 254
           QYGE+YGRMQFQYCGF
Sbjct: 323 QYGEMYGRMQFQYCGF 322

[Close]

BLAST of HG10009116 vs. NCBI nr
Match: KAG7016981.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 5.2e-96
Identity = 203/256 (79.30%), Postives = 210/256 (82.03%), Query Frame = 0


Query: 1   MQGLSLSHATDFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPFE 60
           MQGLSLSH  DF LL DPSSSSSNGFQNLSNF + S           SFNQPLCF+ P E
Sbjct: 82  MQGLSLSHGNDFPLLADPSSSSSNGFQNLSNFHLNSN----------SFNQPLCFD-PIE 141

Query: 61  NAAATAAVVDKSLLLHRSFSEKPGF---QSCLESLLMESSDFPNNHQSLPCPESDFFSSQ 120
           NAAA A   DKS  LHRSFSEKPGF   QS LESLLM+S +FPN  QSLPCPESDFFSSQ
Sbjct: 142 NAAAAA---DKS-FLHRSFSEKPGFLGGQSRLESLLMDSPNFPN--QSLPCPESDFFSSQ 201

Query: 121 IRRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTI 180
           IRRVFS GDLQNSG GRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRN+NKTI
Sbjct: 202 IRRVFSAGDLQNSGRGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNYNKTI 261

Query: 181 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGK 240
           KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIE            GK
Sbjct: 262 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIE------------GK 308

Query: 241 QYGEVYGRMQFQYCGF 254
           +YGEVYG+MQFQYCGF
Sbjct: 322 EYGEVYGQMQFQYCGF 308

[Close]

BLAST of HG10009116 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.7e-07
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0


Query: 102 NHQSLP-CPESDFFSSQIRRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKER 161
           N  ++P C   D  +S +R   ST DL  +  G      S+M    F      A +R+ R
Sbjct: 216 NMSTVPDCGVPDITTSYLRSSKSTIDLFTAAAGSPVAAHSIMSPPQF----MGAIDREAR 275

Query: 162 ISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 202
           + +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +
Sbjct: 276 VHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

[Close]

BLAST of HG10009116 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-06
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 153 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 212
           S  +R+ R+ +YR K+  R F KTI+YA RK  A+ RPRI+GRFA+  +  E    A ST
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFST 341

[Close]

BLAST of HG10009116 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 6.8e-06
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 153 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGE 205
           ++ ER+ R+ +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +  E
Sbjct: 291 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 342

[Close]

BLAST of HG10009116 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 31/72 (43.06%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 153 SAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACST 212
           S  ER+ R+ +YR KR  R F KTI+YA RK  A+ RPRI+GRFA+  +          +
Sbjct: 225 SPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD----------S 284

Query: 213 REEDEDDFWIEG 225
           RE D  D  + G
Sbjct: 285 RENDGGDVGVYG 286

[Close]

BLAST of HG10009116 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 125 GDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKT 184
           G + +     S N S++         + S+ +R+ R+ +YR KR  R F KTI+YA RK 
Sbjct: 253 GVVPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKA 312

Query: 185 LADNRPRIRGRFARNDE 202
            A++RPRI+GRFA+  E
Sbjct: 313 YAESRPRIKGRFAKRTE 329

[Close]

BLAST of HG10009116 vs. ExPASy TrEMBL
Match: A0A0A0KNV6 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152920 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106
Identity = 213/255 (83.53%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DF LLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLCF+PP 
Sbjct: 1   MQGLSLSHPTPDFPLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCFDPP- 60

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES +FPNNH SLPCPESDFFSSQIR
Sbjct: 61  EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQNFPNNHHSLPCPESDFFSSQIR 120

Query: 121 RVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKY 180
           RVFSTGDLQNSG GRS   SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIKY
Sbjct: 121 RVFSTGDLQNSGNGRS---SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKY 180

Query: 181 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GKQ 240
           ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GKQ
Sbjct: 181 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQ 239

Query: 241 YGEVYGRMQFQYCGF 254
           YGE+YGRMQFQYCGF
Sbjct: 241 YGEMYGRMQFQYCGF 239

[Close]

BLAST of HG10009116 vs. ExPASy TrEMBL
Match: A0A1S3AUB2 (uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 211/255 (82.75%), Postives = 218/255 (85.49%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DFHLLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLC   P 
Sbjct: 83  MQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCSLDPP 142

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES  FPNNH SLPCPESDFFSSQIR
Sbjct: 143 EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQKFPNNHHSLPCPESDFFSSQIR 202

Query: 121 RVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKY 180
           RVFSTGDLQNSG GR    SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIKY
Sbjct: 203 RVFSTGDLQNSGNGR----SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKY 262

Query: 181 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GKQ 240
           ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GKQ
Sbjct: 263 ACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQ 321

Query: 241 YGEVYGRMQFQYCGF 254
           YGE+YGRMQFQYCGF
Sbjct: 323 YGEMYGRMQFQYCGF 321

[Close]

BLAST of HG10009116 vs. ExPASy TrEMBL
Match: A0A1S3ATQ3 (uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 7.3e-104
Identity = 211/256 (82.42%), Postives = 218/256 (85.16%), Query Frame = 0


Query: 1   MQGLSLSHAT-DFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 60
           MQGLSLSH T DFHLLP+PS SSSNGFQNL+NFDVK+EES LGF      N PLC   P 
Sbjct: 83  MQGLSLSHPTPDFHLLPNPSPSSSNGFQNLTNFDVKNEESLLGFN-----NPPLCSLDPP 142

Query: 61  ENAAATAAVVDKSLLLHRSFSEKPGFQSCLESLLMESSDFPNNHQSLPCPESDFFSSQIR 120
           EN       VDKSLLLHRSFSEKP FQ+ LE+ LMES  FPNNH SLPCPESDFFSSQIR
Sbjct: 143 EN-------VDKSLLLHRSFSEKPNFQTRLETFLMESQKFPNNHHSLPCPESDFFSSQIR 202

Query: 121 RVFSTGDL-QNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTIK 180
           RVFSTGDL QNSG GR    SSLMEEGNFKVGRYSAEERKERI KYRAKRTQRNFNKTIK
Sbjct: 203 RVFSTGDLQQNSGNGR----SSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIK 262

Query: 181 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMR-GK 240
           YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLH  EEEGT+R GK
Sbjct: 263 YACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGK 322

Query: 241 QYGEVYGRMQFQYCGF 254
           QYGE+YGRMQFQYCGF
Sbjct: 323 QYGEMYGRMQFQYCGF 322

[Close]

BLAST of HG10009116 vs. ExPASy TrEMBL
Match: A0A6J1EQ84 (putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=LOC111435633 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96
Identity = 203/256 (79.30%), Postives = 210/256 (82.03%), Query Frame = 0


Query: 1   MQGLSLSHATDFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPFE 60
           MQGLSLSH  DF LL DPSSSSSNGFQNLSNF + S           SFNQPLCF+ P E
Sbjct: 136 MQGLSLSHGNDFPLLADPSSSSSNGFQNLSNFHLNSN----------SFNQPLCFD-PIE 195

Query: 61  NAAATAAVVDKSLLLHRSFSEKPGF---QSCLESLLMESSDFPNNHQSLPCPESDFFSSQ 120
           NAAA A   DKS  LHRSFSEKPGF   QS LESLLM+S +FPN  QSLPCPESDFFSSQ
Sbjct: 196 NAAAAA---DKS-FLHRSFSEKPGFLGGQSRLESLLMDSPNFPN--QSLPCPESDFFSSQ 255

Query: 121 IRRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTI 180
           IRRVFS GDLQNSG GRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRN+NKTI
Sbjct: 256 IRRVFSAGDLQNSGRGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNYNKTI 315

Query: 181 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGK 240
           KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIE            GK
Sbjct: 316 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIE------------GK 362

Query: 241 QYGEVYGRMQFQYCGF 254
           +YGEVYG+MQFQYCGF
Sbjct: 376 EYGEVYGQMQFQYCGF 362

[Close]

BLAST of HG10009116 vs. ExPASy TrEMBL
Match: A0A6J1I1T9 (putative zinc finger protein CONSTANS-LIKE 11 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469074 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.8e-95
Identity = 202/256 (78.91%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MQGLSLSHATDFHLLPDPSSSSSNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPFE 60
           MQGLSLSH  DF LL DPSSSSSNGFQNLSNF + S           SFNQPLCF+P  E
Sbjct: 78  MQGLSLSHGNDFPLLADPSSSSSNGFQNLSNFHLNSN----------SFNQPLCFDPT-E 137

Query: 61  NAAATAAVVDKSLLLHRSFSEKPGF---QSCLESLLMESSDFPNNHQSLPCPESDFFSSQ 120
           NAAA     DKS  LHRSFSEKPGF   QS LESLLM+S +FPN  QSLPCPESDFFSSQ
Sbjct: 138 NAAA-----DKS-FLHRSFSEKPGFLGGQSRLESLLMDSPNFPN--QSLPCPESDFFSSQ 197

Query: 121 IRRVFSTGDLQNSGMGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNFNKTI 180
           IRRVFS GDLQNSG GRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRN+NKTI
Sbjct: 198 IRRVFSAGDLQNSGRGRSENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNYNKTI 257

Query: 181 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGLHAGEEEGTMRGK 240
           KYACRKTLADNRPRIRGRFARNDEPGEIPKAACS+REEDEDDFWIE            GK
Sbjct: 258 KYACRKTLADNRPRIRGRFARNDEPGEIPKAACSSREEDEDDFWIE------------GK 302

Query: 241 QYGEVYGRMQFQYCGF 254
           QYGEVYG MQFQYCGF
Sbjct: 318 QYGEVYGHMQFQYCGF 302

[Close]

BLAST of HG10009116 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-37
Identity = 101/183 (55.19%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 61  NAAATAA-----VVDKSLLLHRSFS----EKPGFQSCLESLLMESSDFPNNHQSLPCPES 120
           N AAT A     + +    + RSFS    E    Q      +M+SS+   ++ +L  PE+
Sbjct: 109 NQAATMARSYSTIENSGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNL--SYNNLSSPEN 168

Query: 121 DFFSSQIRRVFSTGDLQNS-GMGRSENGSSL--MEEGNFKVGRYSAEERKERISKYRAKR 180
            FFSSQ+RRV+STGDLQN+  M RS   S++   EE NFKVGRYSAEERKE+ISKYRAKR
Sbjct: 169 AFFSSQMRRVYSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKR 228

Query: 181 TQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACSTREEDEDDFW-IEGLHA 231
            QRNF KTIKYACRKTLAD+RPRIRGRFARNDE  EIP       E+D+ + W ++GLH 
Sbjct: 229 NQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEIPNI-----EDDDSELWKLDGLHE 284

[Close]

BLAST of HG10009116 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 149.1 bits (375), Expect = 4.9e-36
Identity = 112/274 (40.88%), Postives = 145/274 (52.92%), Query Frame = 0


Query: 5   SLSHATDFHLLPDPSSSS-----SNGFQNLSNFDVKSEESHLGFTSNASFNQPLCFEPPF 64
           S+ H+TD  +    ++++     +N + N S  D +S      FT     +  L   PP 
Sbjct: 16  SICHSTDPDMFSSDTTTTTDLYCNNPYLNPSMDDHQSLSFFESFTPTT--HHILSSSPPI 75

Query: 65  ENAAATAAVVDKSLLLHRSF-------SEKPGFQSCLESLLMESSDFPNNHQSLPCPESD 124
                       S      F       +E+  F S  ++  ME S    N   L  PE  
Sbjct: 76  SQLQTLTLTHTNSFPNFSGFENFDTVKTEQLLFNSPFDAPFMEDSSNFQNQNLLNSPEDS 135

Query: 125 FFSSQIRRVFSTGDLQNSG---MGRSENGSSLM-----------EEGNFKVGRYSAEERK 184
           FFS  +RRV+STGDLQN G    G+    S L            +E + +VGRYS+EERK
Sbjct: 136 FFSDHMRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERK 195

Query: 185 ERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGEIPKAACS-TREEDE 244
           E+ISKYRAKRTQRNF KTIKYACRKTLADNRPR+RGRFARNDE  E PK A S TR+E++
Sbjct: 196 EKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKIASSFTRQEND 255

Query: 245 DDFW-IEGLHAGEEEGTMRGKQYGEVYGRMQFQY 251
           DD W ++GLH  EE      +   +   ++Q QY
Sbjct: 256 DDLWNLDGLHEEEEACVNLVECQSQSQPQLQMQY 287

[Close]

BLAST of HG10009116 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.9e-22
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 97  SDFPNNHQSLPCPESD----FFSSQIRRVFSTGDLQNSGMGRSENGSSL----------- 156
           SDF  +H  L   ++D    F    I+ +F+ GD    G+   EN + +           
Sbjct: 208 SDFKPSHDQLMEIQADNGGLFCPDPIKPIFNPGDHHLQGLDGVENQNHMVAQPVLPQLGT 267

Query: 157 ----MEEGNF-KVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRF 216
               +++ +F KVG+ SAE+RKE+I +Y  KR +RNF+K IKYACRKTLAD+RPR+RGRF
Sbjct: 268 EITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRF 327

Query: 217 ARNDEPGEIPKAACSTREEDEDD 220
           A+NDE GE  + ACS+  ED+DD
Sbjct: 328 AKNDEFGEPNRQACSSHHEDDDD 350

[Close]

BLAST of HG10009116 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.4e-21
Identity = 63/139 (45.32%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 98  DFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRSENGSSL---------------- 157
           DF  ++    CP+S      I+R+F+  DLQ +  G +EN S L                
Sbjct: 241 DFQADNGGFFCPDS------IKRMFNPEDLQKALGGGAENQSHLVTPQAHPALGPVDING 300

Query: 158 MEEGNF-KVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARND 217
           +E+    KVG+ S E+RKE+I +Y  KR +RNFNK IKYACRKTLAD+RPR+RGRFA+ND
Sbjct: 301 LEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKND 360

Query: 218 EPGEIPKAACSTREEDEDD 220
           E GE  + A S+  +DED+
Sbjct: 361 EFGEPNRQAFSSHHDDEDE 373

[Close]

BLAST of HG10009116 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20
Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 98  DFPNNHQSLPCPESDFFSSQIRRVFSTGDLQNSGMGRSENGSSL---------------- 157
           DF  ++    CP+S      I+R+F+  DLQ  G G +EN S L                
Sbjct: 241 DFQADNGGFFCPDS------IKRMFNPEDLQALG-GGAENQSHLVTPQAHPALGPVDING 300

Query: 158 MEEGNF-KVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARND 217
           +E+    KVG+ S E+RKE+I +Y  KR +RNFNK IKYACRKTLAD+RPR+RGRFA+ND
Sbjct: 301 LEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKND 360

Query: 218 EPGEIPKAACSTREEDEDD 220
           E GE  + A S+  +DED+
Sbjct: 361 EFGEPNRQAFSSHHDDEDE 372

The following BLAST results are available for this feature:

BLAST of HG10009116 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874875.1	8.0e-121	91.37	uncharacterized protein LOC120067375 [Benincasa hispida]	[more]
XP_011654732.1	4.2e-106	83.53	two-component response regulator-like APRR5 [Cucumis sativus] >KAE8647851.1 hypo...	[more]
XP_008437312.1	6.1e-105	82.75	PREDICTED: uncharacterized protein LOC103482769 isoform X2 [Cucumis melo]	[more]
XP_008437311.1	1.5e-103	82.42	PREDICTED: uncharacterized protein LOC103482769 isoform X1 [Cucumis melo]	[more]
KAG7016981.1	5.2e-96	79.30	Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10009116 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82117	2.7e-07	38.61	Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=...	[more]
O50055	2.3e-06	46.67	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q940T9	6.8e-06	50.00	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	2.0e-05	43.06	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9FHH8	2.6e-05	38.96	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]

BLAST of HG10009116 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNV6	2.1e-106	83.53	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152920 PE=4 SV...	[more]
A0A1S3AUB2	3.0e-105	82.75	uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3ATQ3	7.3e-104	82.42	uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EQ84	2.5e-96	79.30	putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I1T9	2.8e-95	78.91	putative zinc finger protein CONSTANS-LIKE 11 isoform X1 OS=Cucurbita maxima OX=...	[more]

BLAST of HG10009116 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41380.1	2.6e-37	55.19	CCT motif family protein	[more]
AT1G63820.1	4.9e-36	40.88	CCT motif family protein	[more]
AT1G04500.1	6.9e-22	44.06	CCT motif family protein	[more]
AT2G33350.1	3.4e-21	45.32	CCT motif family protein	[more]
AT2G33350.2	1.0e-20	46.04	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 157..199 e-value: 6.4E-18 score: 64.6
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 157..199 score: 15.487286
None	No IPR available	PANTHER	PTHR31319:SF46	CCT MOTIF FAMILY PROTEIN	coord: 6..250
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 6..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009116.1	HG10009116.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding