HG10009109 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGTAACAATGAGCTACTAGATATTTAAGTATTTCTGTTCTCATTCATACTGTTATGAACGTACAACACAAATCTGTTTTTACAAGTCCATGGAACCTACCTGCAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGTAATTCTATCTAGATCATCCCTCCAATTCATATTCTATCGTTCTAAAACATTGAGAAACCTAATTATCATTTGACAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAGAAAAACAATACAGTTAAGCATAAATAAACTCAGTACCTGATACTTTCAATTGTATTGAAAAGAAAAAAATAGATCTTAATCATATCAAATGCAACTCTTTTACAGGAAGGCACAAATTATAATTGAACCACAAATAAAAGCAGGACATCTAATCTTGGTAAGTATACAAGCCATCATTTCCAACAATGTCAAAGCATTCAACACTTAAAATTGAGTAAAATCATTCAATGCCCATTCAATTGAAATCAAAGTAAATTGTGTGTATTAACAAATGTTCAATTTGTTGGTCTGATGGGGCTTTTTCTGTAACTAATATCAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGTAAGTTAAATTTAATACCTTATGCCATAGATCTCCGTGAGCAAAAGCTTCTTACTAAACATTAAAGATACATGAACTATGTCTCCTGTAGGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLGYNEGRDFIACYVSSNSRMADKSFSTTLGNVDVKDLYNSLQASLGQLFEELSNLHTLLGSTVY Homology
BLAST of HG10009109 vs. NCBI nr
Match: XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida]) HSP 1 Score: 250.4 bits (638), Expect = 1.5e-62 Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 0
BLAST of HG10009109 vs. NCBI nr
Match: KAA0042732.1 (uncharacterized protein E6C27_scaffold44G002310 [Cucumis melo var. makuwa]) HSP 1 Score: 194.5 bits (493), Expect = 9.7e-46 Identity = 100/140 (71.43%), Postives = 111/140 (79.29%), Query Frame = 0
BLAST of HG10009109 vs. NCBI nr
Match: KAG6579526.1 (hypothetical protein SDJN03_23974, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.1 bits (479), Expect = 4.1e-44 Identity = 103/162 (63.58%), Postives = 124/162 (76.54%), Query Frame = 0
BLAST of HG10009109 vs. NCBI nr
Match: XP_011654728.2 (uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetical protein Csa_000137 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 9.1e-44 Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of HG10009109 vs. NCBI nr
Match: XP_022929026.1 (uncharacterized protein LOC111435747 [Cucurbita moschata]) HSP 1 Score: 186.0 bits (471), Expect = 3.5e-43 Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A5A7TH50 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002310 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 4.7e-46 Identity = 100/140 (71.43%), Postives = 111/140 (79.29%), Query Frame = 0
BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A0A0KMI4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 4.4e-44 Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43 Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43 Identity = 102/161 (63.35%), Postives = 122/161 (75.78%), Query Frame = 0
BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1DR56 (uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43 Identity = 123/267 (46.07%), Postives = 152/267 (56.93%), Query Frame = 0
BLAST of HG10009109 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 78.2 bits (191), Expect = 9.5e-15 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of HG10009109 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 62.0 bits (149), Expect = 7.0e-10 Identity = 29/95 (30.53%), Postives = 55/95 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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