HG10009109 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10009109
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSnoaL-like domain-containing protein
LocationChr06: 2568279 .. 2569612 (-)
RNA-Seq ExpressionHG10009109
SyntenyHG10009109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGTAACAATGAGCTACTAGATATTTAAGTATTTCTGTTCTCATTCATACTGTTATGAACGTACAACACAAATCTGTTTTTACAAGTCCATGGAACCTACCTGCAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGTAATTCTATCTAGATCATCCCTCCAATTCATATTCTATCGTTCTAAAACATTGAGAAACCTAATTATCATTTGACAGAGTGGAAGAACATGGAGATTCCCTTATCCAAGGGTTGCACCTTCATTGACATCAGAAATGAAGAAAGAAAAACAATACAGTTAAGCATAAATAAACTCAGTACCTGATACTTTCAATTGTATTGAAAAGAAAAAAATAGATCTTAATCATATCAAATGCAACTCTTTTACAGGAAGGCACAAATTATAATTGAACCACAAATAAAAGCAGGACATCTAATCTTGGTAAGTATACAAGCCATCATTTCCAACAATGTCAAAGCATTCAACACTTAAAATTGAGTAAAATCATTCAATGCCCATTCAATTGAAATCAAAGTAAATTGTGTGTATTAACAAATGTTCAATTTGTTGGTCTGATGGGGCTTTTTCTGTAACTAATATCAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGTAAGTTAAATTTAATACCTTATGCCATAGATCTCCGTGAGCAAAAGCTTCTTACTAAACATTAAAGATACATGAACTATGTCTCCTGTAGGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA

mRNA sequence

ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA

Coding sequence (CDS)

ATGTCCCTAACTACAAATTCTCCTCCTCAAGCTGTCAACTTGAGGGGCTCCCAATCATCGAGAAGATTTTCCTGTACATCCTTGACTAAAAGAACCTCATGTATATTACAACAAAAGAACTATGGCAACTGCAAGTTGAGGAAAACAAACAACAGATTATCCACCGATGTTAAGCTTCATTTCGTCTCGTCGTGCTTAAAGGATGATTCCTTTTCCAGCTTAGATTCAAGTTCAAATTCTCCATCAGAAATCATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTGAAGGAATTGAGCAATTATATCTCAGAAGACTGCCTCATTGAAGACTCCTCGTTCATTGAACCATTTATAGGGAAGAAGGCAGCTCTGAGTTTCTTTGAAGAACTAACTCAAAGCATGGGTCCAGATGTAAAGATTAAAGTTCATCACATTTACGAAATAGGGGCTTCCAGGGCAATAGCAATCTGGAATTTAGGCTATAATGAAGGTCGTGACTTTATTGCTTGCTACGTATCCAGCAATTCCAGAATGGCTGATAAAAGTTTCTCAACAACGTTGGGTAATGTGGATGTCAAAGATCTGTATAATTCTCTTCAAGCGTCTCTTGGACAGCTTTTTGAAGAGCTATCTAACCTTCATACACTTTTGGGCTCAACTGTATATTAA

Protein sequence

MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLGYNEGRDFIACYVSSNSRMADKSFSTTLGNVDVKDLYNSLQASLGQLFEELSNLHTLLGSTVY
Homology
BLAST of HG10009109 vs. NCBI nr
Match: XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 1.5e-62
Identity = 128/155 (82.58%), Postives = 137/155 (88.39%), Query Frame = 0

Query: 8   PPQAVNLRGSQSSRRFSCTSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVKLHFVSSCL 67
           PPQAVNL GSQS RRFSCT LTKR+SCILQQ KNYGNCK +KTNNRLSTDVKLHFVSSCL
Sbjct: 9   PPQAVNLGGSQSLRRFSCTFLTKRSSCILQQKKNYGNCKKKKTNNRLSTDVKLHFVSSCL 68

Query: 68  KDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAAL 127
           KDDSFS LDS SNSPSE+IERFYKCINEKNLKELS+YISEDC IEDS F+EPFIGKKAAL
Sbjct: 69  KDDSFSRLDSRSNSPSEMIERFYKCINEKNLKELSSYISEDCHIEDSLFVEPFIGKKAAL 128

Query: 128 SFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
            FFEELT SMGPDVK ++H+IYE   S   AIW+L
Sbjct: 129 RFFEELTHSMGPDVKFRIHNIYERRVSSVGAIWHL 163

BLAST of HG10009109 vs. NCBI nr
Match: KAA0042732.1 (uncharacterized protein E6C27_scaffold44G002310 [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 9.7e-46
Identity = 100/140 (71.43%), Postives = 111/140 (79.29%), Query Frame = 0

Query: 84  IIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQSMGPDVKIK 143
           +IE FYKCINEKNLKE+S  ISEDCLIEDS FIE F GKKAA+SF E+LT+SMGPDVK +
Sbjct: 1   MIEIFYKCINEKNLKEMSTCISEDCLIEDSLFIEKFKGKKAAMSFIEKLTESMGPDVKFR 60

Query: 144 VHHIYEIGASRAIAIWNLGYNEGRDFIACYVSSNSRMADKSFSTTLGNVDVKDLYNSLQA 203
           +  +YE   S A AIW+LGYNE  DFIAC  SSN  M DKSFSTTLG  D+KDLY SLQ 
Sbjct: 61  IRTVYERRPSMAGAIWHLGYNETCDFIACKASSNLGMVDKSFSTTLGKEDIKDLYISLQT 120

Query: 204 SLGQLFEELSNLHTLLGSTV 224
           SLGQLFEELSNLHT   ST+
Sbjct: 121 SLGQLFEELSNLHTSWDSTM 140

BLAST of HG10009109 vs. NCBI nr
Match: KAG6579526.1 (hypothetical protein SDJN03_23974, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.1 bits (479), Expect = 4.1e-44
Identity = 103/162 (63.58%), Postives = 124/162 (76.54%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
           M+L T+ PPQA+ L GSQ  R F+ TS+ KR S + QQK     KLRKT+  L+TDVK  
Sbjct: 1   MTLITSPPPQALTL-GSQPFRTFAYTSIPKRPSYLFQQK-----KLRKTSYTLATDVKTR 60

Query: 61  FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
           FVSSCLKD S  SLDS SNSPSE++++ Y+CINEK LKELS+Y+SEDCLIEDS F E FI
Sbjct: 61  FVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFI 120

Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLG 163
           GK+AAL FF+ELTQSMGPDVK +  ++YE GASRA   W+LG
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHLG 156

BLAST of HG10009109 vs. NCBI nr
Match: XP_011654728.2 (uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetical protein Csa_000137 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 9.1e-44
Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSC-TSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
           MSL T+  PQAVN  GSQS RRFS  T L KRTSCI QQ KNYGN   RKTNN L     
Sbjct: 1   MSLITS--PQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60

Query: 61  LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
              V SCL DDSFS   SSSNSP E+IERFYKCINEKNLKE+S YISEDCLIEDS FIE 
Sbjct: 61  ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120

Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
           F GKKAA+SF E+LT+SMGPDVK ++  +YE   S A AIW+L
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHL 153

BLAST of HG10009109 vs. NCBI nr
Match: XP_022929026.1 (uncharacterized protein LOC111435747 [Cucurbita moschata])

HSP 1 Score: 186.0 bits (471), Expect = 3.5e-43
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
           M+L T+ PPQA+ L GSQ  R F+ TS+ KR S + QQK     KLRKT+  L+TDVK  
Sbjct: 1   MALITSPPPQALTL-GSQPFRTFAYTSIPKRPSYLFQQK-----KLRKTSYTLATDVKPR 60

Query: 61  FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
           FVSSCLKD S  SLDS SNSPSE++++ Y+CINEK LKELS+Y+SEDCLIEDS F E FI
Sbjct: 61  FVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFI 120

Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
           GK+AAL FF+ELTQSMGPDVK +  ++YE GASRA   W+L
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHL 155

BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A5A7TH50 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002310 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 4.7e-46
Identity = 100/140 (71.43%), Postives = 111/140 (79.29%), Query Frame = 0

Query: 84  IIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQSMGPDVKIK 143
           +IE FYKCINEKNLKE+S  ISEDCLIEDS FIE F GKKAA+SF E+LT+SMGPDVK +
Sbjct: 1   MIEIFYKCINEKNLKEMSTCISEDCLIEDSLFIEKFKGKKAAMSFIEKLTESMGPDVKFR 60

Query: 144 VHHIYEIGASRAIAIWNLGYNEGRDFIACYVSSNSRMADKSFSTTLGNVDVKDLYNSLQA 203
           +  +YE   S A AIW+LGYNE  DFIAC  SSN  M DKSFSTTLG  D+KDLY SLQ 
Sbjct: 61  IRTVYERRPSMAGAIWHLGYNETCDFIACKASSNLGMVDKSFSTTLGKEDIKDLYISLQT 120

Query: 204 SLGQLFEELSNLHTLLGSTV 224
           SLGQLFEELSNLHT   ST+
Sbjct: 121 SLGQLFEELSNLHTSWDSTM 140

BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A0A0KMI4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.4e-44
Identity = 110/163 (67.48%), Postives = 120/163 (73.62%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSC-TSLTKRTSCILQQ-KNYGNCKLRKTNNRLSTDVK 60
           MSL T+  PQAVN  GSQS RRFS  T L KRTSCI QQ KNYGN   RKTNN L     
Sbjct: 1   MSLITS--PQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL----- 60

Query: 61  LHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEP 120
              V SCL DDSFS   SSSNSP E+IERFYKCINEKNLKE+S YISEDCLIEDS FIE 
Sbjct: 61  ---VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120

Query: 121 FIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
           F GKKAA+SF E+LT+SMGPDVK ++  +YE   S A AIW+L
Sbjct: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHL 153

BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1ELY0 (uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC111435747 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
           M+L T+ PPQA+ L GSQ  R F+ TS+ KR S + QQK     KLRKT+  L+TDVK  
Sbjct: 1   MALITSPPPQALTL-GSQPFRTFAYTSIPKRPSYLFQQK-----KLRKTSYTLATDVKPR 60

Query: 61  FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
           FVSSCLKD S  SLDS SNSPSE++++ Y+CINEK LKELS+Y+SEDCLIEDS F E FI
Sbjct: 61  FVSSCLKDGSVCSLDSCSNSPSEMVKKLYECINEKKLKELSSYMSEDCLIEDSLFDEAFI 120

Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
           GK+AAL FF+ELTQSMGPDVK +  ++YE GASRA   W+L
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGASRAGVTWHL 155

BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43
Identity = 102/161 (63.35%), Postives = 122/161 (75.78%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQKNYGNCKLRKTNNRLSTDVKLH 60
           M+L T+ PPQA+ L GSQ  R F+ TS+ K+ S + QQK     KLRKT+  L TDVK  
Sbjct: 1   MALITSPPPQALTL-GSQPFRTFAYTSIPKKPSSLFQQK-----KLRKTSYTLVTDVKPR 60

Query: 61  FVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFI 120
           FV SCLKD S  SLDS SNSPSE++++FY+CINEK LKELS+YISEDCLIEDS F E FI
Sbjct: 61  FVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEAFI 120

Query: 121 GKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
           GK+AAL FF+ELTQSMGPDVK +  ++YE G SRA A W+L
Sbjct: 121 GKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHL 155

BLAST of HG10009109 vs. ExPASy TrEMBL
Match: A0A6J1DR56 (uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43
Identity = 123/267 (46.07%), Postives = 152/267 (56.93%), Query Frame = 0

Query: 1   MSLTTNSPPQAVNLRGSQSSRRFSCTSLTKRTSCILQQK-----NYGNCKLRKTNNRLST 60
           M+L  + PP ++   GSQS R    T+L K +SC+ QQK      YG+  +RKTN R ST
Sbjct: 1   MALIRSPPPISL---GSQSFRNLPYTALPKISSCVFQQKKTTVLKYGDW-MRKTNKRSST 60

Query: 61  DVKLHFVSSCLKDDSFSSLDSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSF 120
           DVKL FV SCL DDS S LDS+SN  SE+IE FY+CINEKNL+EL +YISEDC+IEDS F
Sbjct: 61  DVKLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLF 120

Query: 121 IEPFIGKKAALSFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNLGY------------ 180
           IEPF G+K AL FFEELTQSMG  VK ++ ++YE G S A AIW L +            
Sbjct: 121 IEPFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCT 180

Query: 181 -----NEGR-----------------DFIACYVSSNSRMAD-------------KSFSTT 216
                NE R                  FI   +   + + D             K  STT
Sbjct: 181 FINIRNEKRRAIQKAQIIVEPQVKAGHFILALLKLVTSLLDTFPAIPEFYCRAAKIVSTT 240

BLAST of HG10009109 vs. TAIR 10
Match: AT5G41470.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 78.2 bits (191), Expect = 9.5e-15
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 0

Query: 72  SSLDSSSNSPSEI-----IERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAAL 131
           S LD  ++ P++I     + +FY  INEKN  +LS+ IS DC I+D SF +PF GK+ A+
Sbjct: 61  SCLDRPNSRPNQISGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFPKPFRGKQEAM 120

Query: 132 SFFEELTQSMGPDVKIKVHHIYEIGASRAIAIWNL 162
            FFEEL +SMG +VK  V ++ E     A   W+L
Sbjct: 121 EFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHL 155

BLAST of HG10009109 vs. TAIR 10
Match: AT1G71480.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-10
Identity = 29/95 (30.53%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 75  DSSSNSPSEIIERFYKCINEKNLKELSNYISEDCLIEDSSFIEPFIGKKAALSFFEELTQ 134
           +++  S SE++  FY  +N  +L  +++ I++DC+ ED  F  PF+G+KA L FF +  +
Sbjct: 65  ETAPTSASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIE 124

Query: 135 SMGPDVKIKVHHIYEIGASRAIAIWNLGYNEGRDF 170
           S   D++  +  I    +S     W+L + +G++F
Sbjct: 125 STSTDLQFVIDDISTEDSSAVGVSWHLEW-KGKNF 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906943.11.5e-6282.58uncharacterized protein LOC120092809 [Benincasa hispida][more]
KAA0042732.19.7e-4671.43uncharacterized protein E6C27_scaffold44G002310 [Cucumis melo var. makuwa][more]
KAG6579526.14.1e-4463.58hypothetical protein SDJN03_23974, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011654728.29.1e-4467.48uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetica... [more]
XP_022929026.13.5e-4363.35uncharacterized protein LOC111435747 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TH504.7e-4671.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KMI44.4e-4467.48SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 ... [more]
A0A6J1ELY01.7e-4363.35uncharacterized protein LOC111435747 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A6J1I4H12.9e-4363.35uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081... [more]
A0A6J1DR563.7e-4346.07uncharacterized protein LOC111023569 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
AT5G41470.19.5e-1544.21Nuclear transport factor 2 (NTF2) family protein [more]
AT1G71480.17.0e-1030.53Nuclear transport factor 2 (NTF2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037401SnoaL-like domainPFAMPF12680SnoaL_2coord: 85..163
e-value: 1.2E-6
score: 29.0
NoneNo IPR availableGENE3D3.10.450.50coord: 70..182
e-value: 1.3E-10
score: 43.1
NoneNo IPR availablePANTHERPTHR33698NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEINcoord: 17..165
NoneNo IPR availablePANTHERPTHR33698:SF1NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 17..165
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 82..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10009109.1HG10009109.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane