
HG10009062 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACCACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGGTAAGTTTAATTTTCTTGCTTCGATTCTCTTATTTTGATTTCTTCGATATATAATTTCATGTCGGGTTTTACTATCATTGTAAAATAGAATTCGCCAAGTGTTTGATTGTTTACCTACGAAAACGTGAGTTGCTGGGTTTAGTTTTAGCATGTTGACAACCGTGTCATATGATAGTAATAACCGCTGATTTGCACAATTGATCATAGACATGGGTTGAAACGTATTGACATAAAGTCTATGACTTTCACGAGTTATGCTATGGCGTTCGTAATATACACTACTAGTTTGGGCAAGCACGCTCAACTGCAAAGTTTTGATAGGATCTTGTGCATTAGAGTTAGTATCTTTTTATAAATTTTTTTTTTTATTTGTATTTTCTCTTTGCTTTTATTATGTAATTATTTTGCCTGGATTTGCAGAACTGA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACCACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGAACTGA ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGATCACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAGCCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCACCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACCACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGAACTGA MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGYWNPAYHHGQAPLISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASASACTCKPAHHHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQINDVWSDHSSDSENECHKPHHNKKN Homology
BLAST of HG10009062 vs. NCBI nr
Match: XP_038875375.1 (uncharacterized protein LOC120067846 [Benincasa hispida]) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-17 Identity = 57/91 (62.64%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of HG10009062 vs. NCBI nr
Match: KAA0042689.1 (uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa] >TYK06092.1 uncharacterized protein E5676_scaffold376G001930 [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 8.5e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of HG10009062 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 8.5e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of HG10009062 vs. NCBI nr
Match: XP_008437383.1 (PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-12 Identity = 45/71 (63.38%), Postives = 51/71 (71.83%), Query Frame = 0
HSP 2 Score: 68.9 bits (167), Expect = 8.6e-08 Identity = 66/176 (37.50%), Postives = 80/176 (45.45%), Query Frame = 0
BLAST of HG10009062 vs. NCBI nr
Match: XP_022958513.1 (glycine-rich cell wall structural protein 1-like [Cucurbita moschata]) HSP 1 Score: 64.3 bits (155), Expect = 2.1e-06 Identity = 105/320 (32.81%), Postives = 126/320 (39.38%), Query Frame = 0
BLAST of HG10009062 vs. ExPASy TrEMBL
Match: A0A5A7TMV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001930 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.1e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of HG10009062 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.1e-16 Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of HG10009062 vs. ExPASy TrEMBL
Match: A0A1S3AUH3 (uncharacterized protein LOC103482815 OS=Cucumis melo OX=3656 GN=LOC103482815 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-13 Identity = 45/71 (63.38%), Postives = 51/71 (71.83%), Query Frame = 0
HSP 2 Score: 68.9 bits (167), Expect = 4.1e-08 Identity = 66/176 (37.50%), Postives = 80/176 (45.45%), Query Frame = 0
BLAST of HG10009062 vs. ExPASy TrEMBL
Match: A0A6J1CWW2 (uncharacterized protein LOC111015315 OS=Momordica charantia OX=3673 GN=LOC111015315 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06 Identity = 46/88 (52.27%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of HG10009062 vs. ExPASy TrEMBL
Match: A0A6J1H399 (glycine-rich cell wall structural protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459722 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06 Identity = 105/320 (32.81%), Postives = 126/320 (39.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|