HG10009008 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10009008
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein BRANCHLESS TRICHOME
Location	Chr06: 1632440 .. 1634784 (-)
RNA-Seq Expression	HG10009008
Synteny	HG10009008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGGAGCTCGATCTAGCCCGAAGCCAGATCGTGGAACTTAAGACCGAGCTTCGATACGAGCGTAAGGCTCGTAAAAAGCTCGAGTCTTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGAAAACAAAGGGAAGCCATGGAAGGACTATGTCAAGAGCTTGCAAGAGAGATTTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTTGTTTGATTTCACTTCTCAATTTTTAAGGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTGCTTTATTTTAATATTTAAAAATTCAACGTTTTTCCATACAACTTTCAAAATGTCGGTTCTAGTGTCTAAATTTAGATTTTAATAAAAAAACCCATTTTAGTCTCTTATTTTATTTCACTTTTATCATAATTTTTTGTAGTTGAATTAATGTGGATTTGATAGGGAGAATCAAACTTTTTTTAGTTTATGGTATATTAATTACATAGATATTTCTATGAAAATTTTTAAAAATTGAAAGATACACAAAATAACAAAATTTTTAGAAGTTGTGATAGAAGCTGATAGAAGTCTATCAAAATCTATTAATGATAGAATGATAGAAGTCTATCACTAACAGATGCATGTTGATAGAAGTCTATCAATATCTATCAGATTTTTTTTTTTTTGCTATTTTCTGTAAATAATTTGACATTTTTTCTATCTGTAAAAATTTCTCACCTTTTATCGATGCTTTTATAGTTGAACTAATGTCAAGTTGAGATGGATAATCAAAACTTTTTCAAATTTATGATATAACTGTTAAAAAAATTCTAAACATGCTTGGATTTACAAAATGTTAAATGTTGATTTTAGTAGATTAGCTGATGGGACCATAGATTAGACCCAAATAGGTGGTCTAAAACAAGTATTGTTAGCAGACAAAATAATCCAAATGATTGAAACATCACTTATTTTGTTTTCAACAGTTCAAGAACAATATAGATATTTGAAAAATTAAGAATAAAAAAGAAATAAAAAAATCTTGCTTTTTTTTCTTCTTCTTCAAGAATTTGGGGATTTAAGCAAGAGAATGAAGTGGCATCTCTTAATAAAACAATCTTTAAAGTTAGTGACAAAAAAGTGAGATTTAAGCCTAAATTAAATAAATTACCCTAAAGGCCACAACTTAAACAGATAGATTAGACCAAAACAAATGGTTAACAACAATAATTGATGAGAAACTAACAAATTCTAACCAAAACATCTGTTATATTCTGCTACAATGTTAATTTAAGTAAGCTTAATAACTCAAACTGCAAATAATTATCAAAGAAACAAATTTGATCTCAGGTAAGTAACAATTTAATACTTCAACAAATTATTATTAGTAATGATTTGGTCTCTAAACATAAAATGTATAACAAAATTAAGTGTCGGTTGTCATTTGATAATAACTTATATATAAATTGATATTTGATCAGTTTATTGATCTACATGTATAAAATAAAATAAATTTTTTTTTATTAAATCCTACAAAAATTTTCACATTAAGAACTAAATTTTTACTTAATAAAGTTCAATGACTAAATTATTATAAATTTGAAAATATAAGAACTAAATCAAATTATCTAATGACTAAATTGTTACTTTCAAGTTTAGAAACCAAAATTATTTTTTAAATCTTTAAGAGTCACATTAATCCTATTCTAATACCATGTTAAACTATTAACAGAATCTAAAATCCGAAATGAAGAATTAAACTTCAACTTATTTCTAAAGAATTTTTTAAAAAATCTACATAATTTGAAATTGAAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACAACACCACCGCTGTATTTTCCGACTTTTCCGGCGAACTAAAGCACAAGGCGGTAGAAAACCTGTCGGCGAGTTCTGACAACAACAACGCCGTTGGCGACGGCGACGGATCTTCACCGAGAGAATCGACAAGATCGGACGCCGTGGCCGTGGGAGAGAAGAGATTAAGCTGCTGCAGCAACATGGCGGCTCCGAGAGGTGTCTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTAAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAATAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAAGCCTCTCTCACATCCAACAACCTCATTATTACCTAA

mRNA sequence

ATGGATTCGGAGCTCGATCTAGCCCGAAGCCAGATCGTGGAACTTAAGACCGAGCTTCGATACGAGCGTAAGGCTCGTAAAAAGCTCGAGTCTTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGAAAACAAAGGGAAGCCATGGAAGGACTATGTCAAGAGCTTGCAAGAGAGATTTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACAACACCACCGCTGTATTTTCCGACTTTTCCGGCGAACTAAAGCACAAGGCGGTAGAAAACCTGTCGGCGAGTTCTGACAACAACAACGCCGTTGGCGACGGCGACGGATCTTCACCGAGAGAATCGACAAGATCGGACGCCGTGGCCGTGGGAGAGAAGAGATTAAGCTGCTGCAGCAACATGGCGGCTCCGAGAGGTGTCTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTAAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAATAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAAGCCTCTCTCACATCCAACAACCTCATTATTACCTAA

Coding sequence (CDS)

ATGGATTCGGAGCTCGATCTAGCCCGAAGCCAGATCGTGGAACTTAAGACCGAGCTTCGATACGAGCGTAAGGCTCGTAAAAAGCTCGAGTCTTTGGCGAAGAGGCTGGCTAAGGAGCTTGATGAAGAGAGAAAACAAAGGGAAGCCATGGAAGGACTATGTCAAGAGCTTGCAAGAGAGATTTCTTCTCATGAAGCTCAAATAGATCTGATGAAGAAGGAGATTGAAGATGAGAGGAAGATGCTCAGGTTGGCTGAGGTTTTGCGAGAAGAGAGAGTTCAAATGAAGCTTGCAGAGGTAAAAATCGTCTTCGAACATATGCTTTCAGAGATTGAATCAGGAACAACCAACAACAACAACACCACCGCTGTATTTTCCGACTTTTCCGGCGAACTAAAGCACAAGGCGGTAGAAAACCTGTCGGCGAGTTCTGACAACAACAACGCCGTTGGCGACGGCGACGGATCTTCACCGAGAGAATCGACAAGATCGGACGCCGTGGCCGTGGGAGAGAAGAGATTAAGCTGCTGCAGCAACATGGCGGCTCCGAGAGGTGTCTCGCCGGAGCTGGAAAATAATAATCCTCATATTGTAAGAGGAATTAAAGGGTTCGTGGAATTCCGGCGAGTGGTTCGAACAAAAGGGTCAAAAAATAGAGATTCAGATGCGAAATTGGAGTGTCAAAAAGCTCAGCTTAGAGTTCTTCTCAAACAAAAAGCCTCTCTCACATCCAACAACCTCATTATTACCTAA

Protein sequence

MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELAREISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNNTTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSCCSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLKQKASLTSNNLIIT

Homology

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BLAST of HG10009008 vs. NCBI nr
Match: XP_038875316.1 (protein BRANCHLESS TRICHOME [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 226/250 (90.40%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE
Sbjct: 69  MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 128

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN
Sbjct: 129 ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 188

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSCCSNM 180
            TAVFS+      H   EN SASSDNNN +GDGDGSSPRESTRSDA A GE+RLS CSNM
Sbjct: 189 -TAVFSE------HTVAENPSASSDNNNTIGDGDGSSPRESTRSDA-AEGEQRLS-CSNM 248

Query: 181 AAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLKQKA 240
           AAPR VSPELENNNPHIVRGIKGFVEFRRV RTKGSKNRDSDAKLECQKAQLRVLLK K 
Sbjct: 249 AAPRSVSPELENNNPHIVRGIKGFVEFRRVFRTKGSKNRDSDAKLECQKAQLRVLLKHKD 308

Query: 241 SLTSNNLIIT 251
           +L SNNLIIT
Sbjct: 309 TLRSNNLIIT 309

[Close]

BLAST of HG10009008 vs. NCBI nr
Match: KAA0042645.1 (protein BRANCHLESS TRICHOME [Cucumis melo var. makuwa] >TYK06046.1 protein BRANCHLESS TRICHOME [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 8.2e-94
Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 1   MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 60

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTT NNN
Sbjct: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTNNN 120

Query: 121 --TTAVFSDFSGELKHKAVE-NLSASSDNNNA-VGDGDGSSPRESTRSDAVAVGEKRLSC 180
             TTA+FSDFS +LKH   + N SA+SDNNNA V D D SS RES RSDA+A        
Sbjct: 121 TTTTAIFSDFSTKLKHTVADNNPSANSDNNNADVDDDDESSLRESMRSDAIA-------- 180

Query: 181 CSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLRVL 240
           C NM   R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQL+VL
Sbjct: 181 CRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLKVL 240

Query: 241 LKQKASLTSNNLIIT 251
           LKQK +L S+NLIIT
Sbjct: 241 LKQKHTLRSDNLIIT 247

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BLAST of HG10009008 vs. NCBI nr
Match: XP_008437448.1 (PREDICTED: protein BRANCHLESS TRICHOME [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 8.2e-94
Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 129 MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 188

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTT NNN
Sbjct: 189 ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTNNN 248

Query: 121 --TTAVFSDFSGELKHKAVE-NLSASSDNNNA-VGDGDGSSPRESTRSDAVAVGEKRLSC 180
             TTA+FSDFS +LKH   + N SA+SDNNNA V D D SS RES RSDA+A        
Sbjct: 249 TTTTAIFSDFSTKLKHTVADNNPSANSDNNNADVDDDDESSLRESMRSDAIA-------- 308

Query: 181 CSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLRVL 240
           C NM   R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQL+VL
Sbjct: 309 CRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLKVL 368

Query: 241 LKQKASLTSNNLIIT 251
           LKQK +L S+NLIIT
Sbjct: 369 LKQKHTLRSDNLIIT 375

[Close]

BLAST of HG10009008 vs. NCBI nr
Match: XP_011654677.1 (protein BRANCHLESS TRICHOME [Cucumis sativus] >KGN49978.1 hypothetical protein Csa_000364 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 5.0e-91
Identity = 204/257 (79.38%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 74  MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 133

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQ+DLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGT+   N
Sbjct: 134 ISSHEAQMDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTSTTTN 193

Query: 121 -----TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTR-SDAVAVGEKRL 180
                TTA+F DFS +LKH   +N S +SDNNNA GD D SS RES R SDA+A      
Sbjct: 194 NTTTTTTAIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESMRSSDAIA------ 253

Query: 181 SCCSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLR 240
             C      R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQLR
Sbjct: 254 --CRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLR 313

Query: 241 VLLKQKASLTSNNLIIT 251
           VLLKQK SL S+NLIIT
Sbjct: 314 VLLKQKHSLRSDNLIIT 322

[Close]

BLAST of HG10009008 vs. NCBI nr
Match: XP_023520493.1 (protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 5.5e-82
Identity = 195/254 (76.77%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARS IVELKTELRYERKARKKLESLAKRLAKELDEERKQREAME LCQ+L+RE
Sbjct: 61  MDSELDLARSHIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMELLCQQLSRE 120

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           +S HE +IDLMKK+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEIE        
Sbjct: 121 VSLHETKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEIE-------- 180

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSC---C 180
                   SG+LK  A +N SASS NNNAV  GDGSSP EST  DAV VGE+RLSC    
Sbjct: 181 --------SGKLKQTAADNSSASSINNNAV--GDGSSPAESTALDAV-VGEQRLSCKMEI 240

Query: 181 SNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLK 240
             +AAP   SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK+RDSDAKLECQKAQLRVLLK
Sbjct: 241 PAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSKSRDSDAKLECQKAQLRVLLK 295

Query: 241 QK-ASLTSNNLIIT 251
           QK  S+ SNNL IT
Sbjct: 301 QKEGSVRSNNLFIT 295

[Close]

BLAST of HG10009008 vs. ExPASy Swiss-Prot
Match: F4I878 (Protein BRANCHLESS TRICHOME OS=Arabidopsis thaliana OX=3702 GN=BLT PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24
Identity = 90/241 (37.34%), Postives = 128/241 (53.11%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           M+SEL  A+ +I ELK EL YERKAR++ E + K+LAK+++EER  REA E   + L +E
Sbjct: 73  MESELGKAQDEIKELKAELDYERKARRRAELMIKKLAKDVEEERMAREAEEMQNKRLFKE 132

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           +SS ++++  MK+++E+ER+M RLAEVLREERVQMKL + ++  E  LSE+E        
Sbjct: 133 LSSEKSEMVRMKRDLEEERQMHRLAEVLREERVQMKLMDARLFLEEKLSELE-------- 192

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSCCSNM 180
                                          + +    RE  R     + E+    CS+ 
Sbjct: 193 -------------------------------EANRQGERERNRMMKPKILER---ACSSP 252

Query: 181 AAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLKQKA 240
           A  R         NP I RGI  F    R +R+K  K     +KLECQK QL++LL+QK 
Sbjct: 253 ARRR-------CENPQIKRGINPFPRVMRAIRSKSEK---WGSKLECQKVQLKILLRQKT 261

Query: 241 S 242
           +
Sbjct: 313 T 261

[Close]

BLAST of HG10009008 vs. ExPASy TrEMBL
Match: A0A5A7TML1 (Protein BRANCHLESS TRICHOME OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001470 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.0e-94
Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 1   MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 60

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTT NNN
Sbjct: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTNNN 120

Query: 121 --TTAVFSDFSGELKHKAVE-NLSASSDNNNA-VGDGDGSSPRESTRSDAVAVGEKRLSC 180
             TTA+FSDFS +LKH   + N SA+SDNNNA V D D SS RES RSDA+A        
Sbjct: 121 TTTTAIFSDFSTKLKHTVADNNPSANSDNNNADVDDDDESSLRESMRSDAIA-------- 180

Query: 181 CSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLRVL 240
           C NM   R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQL+VL
Sbjct: 181 CRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLKVL 240

Query: 241 LKQKASLTSNNLIIT 251
           LKQK +L S+NLIIT
Sbjct: 241 LKQKHTLRSDNLIIT 247

[Close]

BLAST of HG10009008 vs. ExPASy TrEMBL
Match: A0A1S3AUL6 (protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.0e-94
Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 129 MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 188

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTT NNN
Sbjct: 189 ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTTNNN 248

Query: 121 --TTAVFSDFSGELKHKAVE-NLSASSDNNNA-VGDGDGSSPRESTRSDAVAVGEKRLSC 180
             TTA+FSDFS +LKH   + N SA+SDNNNA V D D SS RES RSDA+A        
Sbjct: 249 TTTTAIFSDFSTKLKHTVADNNPSANSDNNNADVDDDDESSLRESMRSDAIA-------- 308

Query: 181 CSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLRVL 240
           C NM   R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQL+VL
Sbjct: 309 CRNMGVRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLKVL 368

Query: 241 LKQKASLTSNNLIIT 251
           LKQK +L S+NLIIT
Sbjct: 369 LKQKHTLRSDNLIIT 375

[Close]

BLAST of HG10009008 vs. ExPASy TrEMBL
Match: A0A0A0KK85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91
Identity = 204/257 (79.38%), Postives = 217/257 (84.44%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARSQIVELKT+LRYERKARKKLESL KRLAKELDEERKQREAMEGLCQELARE
Sbjct: 74  MDSELDLARSQIVELKTQLRYERKARKKLESLTKRLAKELDEERKQREAMEGLCQELARE 133

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           ISSHEAQ+DLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGT+   N
Sbjct: 134 ISSHEAQMDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTSTTTN 193

Query: 121 -----TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTR-SDAVAVGEKRL 180
                TTA+F DFS +LKH   +N S +SDNNNA GD D SS RES R SDA+A      
Sbjct: 194 NTTTTTTAIFPDFSAKLKHTVADNPSVNSDNNNADGDDDESSVRESMRSSDAIA------ 253

Query: 181 SCCSNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSK-NRDSDAKLECQKAQLR 240
             C      R +SPE+ENNNPHIVRGIKGFVEFRRVVRTKGSK +RDS+AKLECQKAQLR
Sbjct: 254 --CRKTGDRRSISPEMENNNPHIVRGIKGFVEFRRVVRTKGSKLSRDSEAKLECQKAQLR 313

Query: 241 VLLKQKASLTSNNLIIT 251
           VLLKQK SL S+NLIIT
Sbjct: 314 VLLKQKHSLRSDNLIIT 322

[Close]

BLAST of HG10009008 vs. ExPASy TrEMBL
Match: A0A6J1EL37 (protein BRANCHLESS TRICHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111435642 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 194/254 (76.38%), Postives = 207/254 (81.50%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARS IVELKTELRYERKARKKLESLAKRLAKELDEERKQREAME LCQ+L+RE
Sbjct: 61  MDSELDLARSHIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMELLCQQLSRE 120

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           +S HE +IDLMKK+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEIE        
Sbjct: 121 VSLHETKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEIE-------- 180

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSC---C 180
                   SG+LK  A +N SASS NNNAV  GDGSSP EST  DAV VGE+RLSC    
Sbjct: 181 --------SGKLKQTAADNSSASSINNNAV--GDGSSPAESTALDAV-VGEQRLSCKMEI 240

Query: 181 SNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLK 240
             +AAP   SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK+RDSDAKLECQKAQLRVLLK
Sbjct: 241 PAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSKSRDSDAKLECQKAQLRVLLK 295

Query: 241 QK-ASLTSNNLIIT 251
           QK  S+ S NL IT
Sbjct: 301 QKEGSVRSKNLFIT 295

[Close]

BLAST of HG10009008 vs. ExPASy TrEMBL
Match: A0A6J1HY45 (protein BRANCHLESS TRICHOME-like OS=Cucurbita maxima OX=3661 GN=LOC111469076 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.7e-81
Identity = 193/254 (75.98%), Postives = 207/254 (81.50%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           MDSELDLARS IVELKTELRYERKARKKLESLAKRL KELDEERKQREAME LCQ+L+RE
Sbjct: 61  MDSELDLARSHIVELKTELRYERKARKKLESLAKRLTKELDEERKQREAMELLCQQLSRE 120

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           +S HE +IDLMKK+IEDERKMLRL+EVLREERVQMKLAEVKIVFE MLSEIE        
Sbjct: 121 VSLHETKIDLMKKKIEDERKMLRLSEVLREERVQMKLAEVKIVFEDMLSEIE-------- 180

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSC---C 180
                   SG+LK  A +N SASS NNNAV  GDGSSP EST  DAV VGE+RLSC    
Sbjct: 181 --------SGKLKQTAADNSSASSINNNAV--GDGSSPAESTALDAV-VGEQRLSCKMEI 240

Query: 181 SNMAAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLK 240
             +AAP   SPE+EN NPHIVRGIKGFVEFRRVVRTKGSK+RDSD+KLECQKAQLRVLLK
Sbjct: 241 PAVAAPTSGSPEVENINPHIVRGIKGFVEFRRVVRTKGSKSRDSDSKLECQKAQLRVLLK 295

Query: 241 QK-ASLTSNNLIIT 251
           QK  S+ SNNL IT
Sbjct: 301 QKEGSVRSNNLFIT 295

[Close]

BLAST of HG10009008 vs. TAIR 10
Match: AT1G64690.1 (branchless trichome )

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-25
Identity = 90/241 (37.34%), Postives = 128/241 (53.11%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDEERKQREAMEGLCQELARE 60
           M+SEL  A+ +I ELK EL YERKAR++ E + K+LAK+++EER  REA E   + L +E
Sbjct: 73  MESELGKAQDEIKELKAELDYERKARRRAELMIKKLAKDVEEERMAREAEEMQNKRLFKE 132

Query: 61  ISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEHMLSEIESGTTNNNN 120
           +SS ++++  MK+++E+ER+M RLAEVLREERVQMKL + ++  E  LSE+E        
Sbjct: 133 LSSEKSEMVRMKRDLEEERQMHRLAEVLREERVQMKLMDARLFLEEKLSELE-------- 192

Query: 121 TTAVFSDFSGELKHKAVENLSASSDNNNAVGDGDGSSPRESTRSDAVAVGEKRLSCCSNM 180
                                          + +    RE  R     + E+    CS+ 
Sbjct: 193 -------------------------------EANRQGERERNRMMKPKILER---ACSSP 252

Query: 181 AAPRGVSPELENNNPHIVRGIKGFVEFRRVVRTKGSKNRDSDAKLECQKAQLRVLLKQKA 240
           A  R         NP I RGI  F    R +R+K  K     +KLECQK QL++LL+QK 
Sbjct: 253 ARRR-------CENPQIKRGINPFPRVMRAIRSKSEK---WGSKLECQKVQLKILLRQKT 261

Query: 241 S 242
           +
Sbjct: 313 T 261

[Close]

BLAST of HG10009008 vs. TAIR 10
Match: AT1G50660.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-13
Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 4   ELDLARSQIVELKTELRYERKARKKLESLAKRLAKEL--------------DEERKQREA 63
           E +  R+ I ++KT++  E+K R++LE +  +L  EL              ++ERK RE 
Sbjct: 285 EHEKVRAIIDDMKTDMNREKKTRQRLEIVNHKLVNELADSKLAVKRYMQDYEKERKAREL 344

Query: 64  MEGLCQELAREISSHEAQIDLMKK-------EIEDERKMLRLAEVLREERVQMKLAEVKI 112
           +E +C ELA+EI   +A+I+ +K+       E++DER+ML++AEV REERVQMKL + K+
Sbjct: 345 IEEVCDELAKEIGEDKAEIEALKRESMSLREEVDDERRMLQMAEVWREERVQMKLIDAKV 404

[Close]

BLAST of HG10009008 vs. TAIR 10
Match: AT3G11590.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins in 1213 species: Archae - 372; Bacteria - 2307; Metazoa - 10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other Eukaryotes - 5824 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 6.4e-12
Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 3   SELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDE--------------ERKQRE 62
           +E ++  + I  +  EL  ERK R++ ESL K+L KEL E              E++ R 
Sbjct: 302 NEQEVVEAAIESVAGELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEIENEKRARV 361

Query: 63  AMEGLCQELAREISSHEAQIDLMKK-------EIEDERKMLRLAEVLREERVQMKLAEVK 111
            +E +C ELAR+IS  +A+++ +K+       E+E ER+ML+LA+ LREERVQMKL+E K
Sbjct: 362 MVEKVCDELARDISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAK 421

[Close]

BLAST of HG10009008 vs. TAIR 10
Match: AT3G20350.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 15095 Blast hits to 11224 proteins in 1051 species: Archae - 223; Bacteria - 1586; Metazoa - 7000; Fungi - 1255; Plants - 746; Viruses - 40; Other Eukaryotes - 4245 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 6.4e-12
Identity = 58/170 (34.12%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 4   ELDLARSQIVELKTELRYERKARKKLESLAKRLAKEL--------------DEERKQREA 63
           E +  R+ I ++K ++  E+K R++LE +  +L  EL               +ERK RE 
Sbjct: 262 EHEKVRAIIDDMKADMNQEKKTRQRLEIVNSKLVNELADSKLAVKRYMHDYQQERKAREL 321

Query: 64  MEGLCQELAREISSHEAQIDLMK-------KEIEDERKMLRLAEVLREERVQMKLAEVKI 123
           +E +C ELA+EI   +A+I+ +K       +E++DER+ML++AEV REERVQMKL + K+
Sbjct: 322 IEEVCDELAKEIEEDKAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDAKV 381

Query: 124 VFEHMLSEIE------SGTTNNNNTTAVFSDFSGELKHKAVENLSASSDN 147
             E   S++           ++ NTT V      EL    +   +AS DN
Sbjct: 382 TLEEKYSQMNKLVGDMEAFLSSRNTTGVKEVRVAEL----LRETAASVDN 427

[Close]

BLAST of HG10009008 vs. TAIR 10
Match: AT5G22310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 4.6e-10
Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 1   MDSELDLARSQIVELKTELRYERKARKKLESLAKRLAKELDE----ERKQREAM------ 60
           +D E +  R  I  L+ E   ERK R++ E + +RL +EL E    ERK +E M      
Sbjct: 235 LDEEEEEKRRLIESLQEEAMVERKLRRRTEKMNRRLGRELTEAKETERKMKEEMKREKRA 294

Query: 61  ----EGLCQELAREISSHEAQIDLMKKEIEDERKMLRLAEVLREERVQMKLAEVKIVFEH 113
               E +C EL + I          KKE+E ER+M+ +A+VLREERVQMKL E K  FE 
Sbjct: 295 KDVLEEVCDELTKGIGDD-------KKEMEKEREMMHIADVLREERVQMKLTEAKFEFED 353

The following BLAST results are available for this feature:

BLAST of HG10009008 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875316.1	1.3e-104	90.40	protein BRANCHLESS TRICHOME [Benincasa hispida]	[more]
KAA0042645.1	8.2e-94	82.35	protein BRANCHLESS TRICHOME [Cucumis melo var. makuwa] >TYK06046.1 protein BRANC...	[more]
XP_008437448.1	8.2e-94	82.35	PREDICTED: protein BRANCHLESS TRICHOME [Cucumis melo]	[more]
XP_011654677.1	5.0e-91	79.38	protein BRANCHLESS TRICHOME [Cucumis sativus] >KGN49978.1 hypothetical protein C...	[more]
XP_023520493.1	5.5e-82	76.77	protein BRANCHLESS TRICHOME-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10009008 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I878	3.2e-24	37.34	Protein BRANCHLESS TRICHOME OS=Arabidopsis thaliana OX=3702 GN=BLT PE=1 SV=1	[more]

BLAST of HG10009008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TML1	4.0e-94	82.35	Protein BRANCHLESS TRICHOME OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AUL6	4.0e-94	82.35	protein BRANCHLESS TRICHOME OS=Cucumis melo OX=3656 GN=LOC103482864 PE=4 SV=1	[more]
A0A0A0KK85	2.4e-91	79.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148490 PE=4 SV=1	[more]
A0A6J1EL37	1.3e-81	76.38	protein BRANCHLESS TRICHOME-like OS=Cucurbita moschata OX=3662 GN=LOC111435642 P...	[more]
A0A6J1HY45	1.7e-81	75.98	protein BRANCHLESS TRICHOME-like OS=Cucurbita maxima OX=3661 GN=LOC111469076 PE=...	[more]

BLAST of HG10009008 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64690.1	2.3e-25	37.34	branchless trichome	[more]
AT1G50660.1	5.8e-13	37.98	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]
AT3G11590.1	6.4e-12	40.31	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G20350.1	6.4e-12	34.12	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem...	[more]
AT5G22310.1	4.6e-10	39.68	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..163
IPR043424	Protein BRANCHLESS TRICHOME-like	PANTHER	PTHR31071	GB\|AAF24581.1	coord: 1..240
IPR040209	Protein BRANCHLESS TRICHOME	PANTHER	PTHR31071:SF39	PROTEIN BRANCHLESS TRICHOME	coord: 1..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10009008.1	HG10009008.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010091	trichome branching