HG10008987 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTATACGGCGGTGCTCGCGGAGGTGCTCCGGCAGCTCTTTCATTCTGCCCCATTTCCTCGCCGTGTCCGGTTTCTCATCCTTCATAATCTCCCTTTCGCCAATCGCCCCAGCGGCGTAGCGGCGTAG ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTATACGGCGGTGCTCGCGGAGGTGCTCCGGCAGCTCTTTCATTCTGCCCCATTTCCTCGCCGTGTCCGGTTTCTCATCCTTCATAATCTCCCTTTCGCCAATCGCCCCAGCGGCGTAGCGGCGTAG ATGATGCTAGTATCGGTACTGGCGGAGATTCTAGAGGAGTATACGGCGGTGCTCGCGGAGGTGCTCCGGCAGCTCTTTCATTCTGCCCCATTTCCTCGCCGTGTCCGGTTTCTCATCCTTCATAATCTCCCTTTCGCCAATCGCCCCAGCGGCGTAGCGGCGTAG MMLVSVLAEILEEYTAVLAEVLRQLFHSAPFPRRVRFLILHNLPFANRPSGVAA Homology
BLAST of HG10008987 vs. NCBI nr
Match: XP_038907007.1 (uncharacterized protein LOC120092849 [Benincasa hispida]) HSP 1 Score: 97.1 bits (240), Expect = 5.1e-17 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of HG10008987 vs. NCBI nr
Match: XP_008437471.1 (PREDICTED: uncharacterized protein LOC103482883 [Cucumis melo]) HSP 1 Score: 90.1 bits (222), Expect = 6.2e-15 Identity = 45/54 (83.33%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of HG10008987 vs. NCBI nr
Match: XP_011654666.1 (uncharacterized protein LOC105435431 [Cucumis sativus] >KGN49959.1 hypothetical protein Csa_000696 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 1.1e-14 Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of HG10008987 vs. NCBI nr
Match: XP_022970120.1 (uncharacterized protein LOC111469109 [Cucurbita maxima]) HSP 1 Score: 87.4 bits (215), Expect = 4.0e-14 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of HG10008987 vs. NCBI nr
Match: KAG7017064.1 (hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.4 bits (215), Expect = 4.0e-14 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of HG10008987 vs. ExPASy TrEMBL
Match: A0A1S3AUP0 (uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.0e-15 Identity = 45/54 (83.33%), Postives = 52/54 (96.30%), Query Frame = 0
BLAST of HG10008987 vs. ExPASy TrEMBL
Match: A0A0A0KM75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.1e-15 Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of HG10008987 vs. ExPASy TrEMBL
Match: A0A6J1I1Z0 (uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of HG10008987 vs. ExPASy TrEMBL
Match: A0A6J1EQP1 (uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC111435715 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14 Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of HG10008987 vs. ExPASy TrEMBL
Match: A0A6J1DZC9 (uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025999 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-12 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of HG10008987 vs. TAIR 10
Match: AT1G33055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 2.7e-08 Identity = 26/45 (57.78%), Postives = 37/45 (82.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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