HG10008934 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008934
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionWD repeat-containing protein 91-like protein
LocationChr06: 845302 .. 845886 (+)
RNA-Seq ExpressionHG10008934
SyntenyHG10008934
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGTTAAAGATCACGACTACTTGGAGAAGAGAATGGAAGAATTAAAAGACATGAGCGAAAAGCAAGAAGCAATAGCGAATTACTATGACACCAAATTACACACTGTAATTGTGGCTTACTTCATTTGGGAACGTGTCTTCTTCTTCTTCGTCTCCCAGAAAACTAATTCTCCTTCCTCCCTCAGCTGCAATAATGGCAACTTGTGGGTGATTCTTGCTCTAAGCTGTTTATGCAGCCTCGTTTACATGCTTCTTTTTGTCGACGCTGCCCTCATTCTCTACCAAACAGAGCATCAACTCAATCTCATCCTCCAAACACATGCGCAACTTTATCGACAAATCTGGACAATCAAAAGAGAAGCTGCTGACACCAATATAGATCCATCAATAATGGAGGCCGGGGATGATCAGTCTAACCAAGGACTCCGGCCAGAGGAGGAACTCATACTCATAATAAACTCAAATTCAGCATTTAGAAGGAGAGGGCAGAGGAAATTTTATGTGTATACCATTTTCTGTGCTCTGCTTGCTGTTGCTGCTTTAGAATTATATGCCTGCAAGTCTATGCTCTGCAATTGA

mRNA sequence

ATGGAAGTTGTTAAAGATCACGACTACTTGGAGAAGAGAATGGAAGAATTAAAAGACATGAGCGAAAAGCAAGAAGCAATAGCGAATTACTATGACACCAAATTACACACTGTAATTGTGGCTTACTTCATTTGGGAACGTGTCTTCTTCTTCTTCGTCTCCCAGAAAACTAATTCTCCTTCCTCCCTCAGCTGCAATAATGGCAACTTGTGGGTGATTCTTGCTCTAAGCTGTTTATGCAGCCTCGTTTACATGCTTCTTTTTGTCGACGCTGCCCTCATTCTCTACCAAACAGAGCATCAACTCAATCTCATCCTCCAAACACATGCGCAACTTTATCGACAAATCTGGACAATCAAAAGAGAAGCTGCTGACACCAATATAGATCCATCAATAATGGAGGCCGGGGATGATCAGTCTAACCAAGGACTCCGGCCAGAGGAGGAACTCATACTCATAATAAACTCAAATTCAGCATTTAGAAGGAGAGGGCAGAGGAAATTTTATGTGTATACCATTTTCTGTGCTCTGCTTGCTGTTGCTGCTTTAGAATTATATGCCTGCAAGTCTATGCTCTGCAATTGA

Coding sequence (CDS)

ATGGAAGTTGTTAAAGATCACGACTACTTGGAGAAGAGAATGGAAGAATTAAAAGACATGAGCGAAAAGCAAGAAGCAATAGCGAATTACTATGACACCAAATTACACACTGTAATTGTGGCTTACTTCATTTGGGAACGTGTCTTCTTCTTCTTCGTCTCCCAGAAAACTAATTCTCCTTCCTCCCTCAGCTGCAATAATGGCAACTTGTGGGTGATTCTTGCTCTAAGCTGTTTATGCAGCCTCGTTTACATGCTTCTTTTTGTCGACGCTGCCCTCATTCTCTACCAAACAGAGCATCAACTCAATCTCATCCTCCAAACACATGCGCAACTTTATCGACAAATCTGGACAATCAAAAGAGAAGCTGCTGACACCAATATAGATCCATCAATAATGGAGGCCGGGGATGATCAGTCTAACCAAGGACTCCGGCCAGAGGAGGAACTCATACTCATAATAAACTCAAATTCAGCATTTAGAAGGAGAGGGCAGAGGAAATTTTATGTGTATACCATTTTCTGTGCTCTGCTTGCTGTTGCTGCTTTAGAATTATATGCCTGCAAGTCTATGCTCTGCAATTGA

Protein sequence

MEVVKDHDYLEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNIDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACKSMLCN
Homology
BLAST of HG10008934 vs. NCBI nr
Match: KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.5 bits (532), Expect = 2.5e-50
Identity = 122/188 (64.89%), Postives = 148/188 (78.72%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKT--NSPSSLSCNN 69
           L+K MEE++ M EK EA  NYYDTKLHT+IVAYF+WERVFFF +S+KT  ++ S+LSC N
Sbjct: 6   LKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKTFPSTISTLSC-N 65

Query: 70  GNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTN 129
           GN WVILALSC CS VY+LLF DAAL+LY+ E+QL+LILQ HAQL R +  IK E ADT 
Sbjct: 66  GNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADTK 125

Query: 130 IDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRR--GQRKFYVYTIFCALLAVAALEL 189
              S+MEAG DQ++ GL  EEEL+L INS S FRRR   +RK +VYTIFCA + VA+LEL
Sbjct: 126 --ASLMEAG-DQASHGLSLEEELML-INSTSPFRRRRPWERKVHVYTIFCAFIGVASLEL 185

Query: 190 YACKSMLC 194
           YACK++LC
Sbjct: 186 YACKAVLC 188

BLAST of HG10008934 vs. NCBI nr
Match: KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 121/195 (62.05%), Postives = 145/195 (74.36%), Query Frame = 0

Query: 8   DYLEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFV-------SQKTNSP 67
           + +EKRMEE+K M EK E   NYYDTKLH +IVAY +WERVFFFF        +   ++ 
Sbjct: 5   EQMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVSNTNFASNI 64

Query: 68  SSLSCNNGNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIK 127
           S+LSC NG  WVI+ALSCLCS VYMLLFVDAAL+LY  ++QLNLILQTH QLYRQ+  IK
Sbjct: 65  STLSC-NGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQLLAIK 124

Query: 128 REAADTNIDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRR-GQRKFYVYTIFCALLA 187
                     S+MEAGD+ S+ GL  EEEL+L INSN+A+RRR   RKFYVYTIFCAL+ 
Sbjct: 125 ---------DSLMEAGDEASH-GLSLEEELML-INSNAAYRRRPWGRKFYVYTIFCALID 184

Query: 188 VAALELYACKSMLCN 195
           VA+LELYAC S+LC+
Sbjct: 185 VASLELYACNSVLCS 187

BLAST of HG10008934 vs. NCBI nr
Match: KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.4 bits (516), Expect = 1.8e-48
Identity = 122/197 (61.93%), Postives = 148/197 (75.13%), Query Frame = 0

Query: 1   MEVVKDHDYLEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSP 60
           M  ++  + L+K MEE++ M E  EA  NYYDTKLH +IVAYF+WERVFFF +S+KT  P
Sbjct: 1   MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPP 60

Query: 61  --SSLSCNNGNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWT 120
             S+LSC NGN WVILALS  CS VY+LLF D AL+LY+ E+QL+LILQ HAQL R +  
Sbjct: 61  TISTLSC-NGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLA 120

Query: 121 IKREAADTNIDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRR--GQRKFYVYTIFCA 180
           IK E AD  I  S+MEAGD+ S+ GL  EEEL+L INS S FRRR   +RK YVYTIFCA
Sbjct: 121 IKEEQAD--IKASLMEAGDEASH-GLSLEEELML-INSTSPFRRRRPWERKVYVYTIFCA 180

Query: 181 LLAVAALELYACKSMLC 194
           L+ VA+LELYACK++LC
Sbjct: 181 LIGVASLELYACKAVLC 192

BLAST of HG10008934 vs. NCBI nr
Match: KAE8650729.1 (hypothetical protein Csa_023412 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 3.4e-47
Identity = 120/197 (60.91%), Postives = 145/197 (73.60%), Query Frame = 0

Query: 1   MEVVKDHDYLEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSP 60
           M  + + + LEKRMEELK MSEKQEA ANYYDTKLHT+I AYFIWER F F +S KTNSP
Sbjct: 1   MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSP 60

Query: 61  ---SSLSCNNGNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIW 120
              SSL C + N  +ILALS L SLVY+LL++DAAL+LY++E + NLIL  HAQLY QI 
Sbjct: 61  NYFSSLIC-HANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQIS 120

Query: 121 TIKREAADTNIDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCAL 180
            IK+E    +ID S MEA           EE+LIL+INS+S FRR  +R FY+ TIFCAL
Sbjct: 121 KIKQEF--NSIDSSSMEA-----------EEDLILLINSSSTFRRSEERIFYMSTIFCAL 180

Query: 181 LAVAALELYACKSMLCN 195
           + VA+LELYACKS+LC+
Sbjct: 181 VCVASLELYACKSILCS 183

BLAST of HG10008934 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 5.9e-23
Identity = 75/185 (40.54%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGN 69
           LE++ EELKD++EKQE+   YY+TK+  ++  Y I+ R+FFF +SQ   + SS +C   +
Sbjct: 6   LERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ---TSSSFNCK--D 65

Query: 70  LWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNID 129
            WVILALS LCS +Y LLF+DA  +L++T++QL++I +   +L++QI  + +   D  + 
Sbjct: 66  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQI-LVSKNQDDVGLS 125

Query: 130 PSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACK 189
              ME G+          E+++++      FR  G RK Y+Y    ALLAV A+ELY  K
Sbjct: 126 ---METGESSGGFEFGFHEKMLML----DHFRIVG-RKVYIYFTVSALLAVTAIELYVSK 176

Query: 190 SMLCN 195
            +LCN
Sbjct: 186 YVLCN 176

BLAST of HG10008934 vs. ExPASy TrEMBL
Match: A0A0A0L822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.8e-47
Identity = 119/188 (63.30%), Postives = 141/188 (75.00%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSP---SSLSCN 69
           LEKRMEELK MSEKQEA ANYYDTKLHT+I AYFIWER F F +S KTNSP   SSL C 
Sbjct: 6   LEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSLIC- 65

Query: 70  NGNLWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADT 129
           + N  +ILALS L SLVY+LL++DAAL+LY++E + NLIL  HAQLY QI  IK+E    
Sbjct: 66  HANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEF--N 125

Query: 130 NIDPSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELY 189
           +ID S MEA           EE+LIL+INS+S FRR  +R FY+ TIFCAL+ VA+LELY
Sbjct: 126 SIDSSSMEA-----------EEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELY 179

Query: 190 ACKSMLCN 195
           ACKS+LC+
Sbjct: 186 ACKSILCS 179

BLAST of HG10008934 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 75/185 (40.54%), Postives = 115/185 (62.16%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGN 69
           LE++ EELKD++EKQE+   YY+TK+  ++  Y I+ R+FFF +SQ   + SS +C   +
Sbjct: 6   LERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ---TSSSFNCK--D 65

Query: 70  LWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNID 129
            WVILALS LCS +Y LLF+DA  +L++T++QL++I +   +L++QI  + +   D  + 
Sbjct: 66  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQI-LVSKNQDDVGLS 125

Query: 130 PSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACK 189
              ME G+          E+++++      FR  G RK Y+Y    ALLAV A+ELY  K
Sbjct: 126 ---METGESSGGFEFGFHEKMLML----DHFRIVG-RKVYIYFTVSALLAVTAIELYVSK 176

Query: 190 SMLCN 195
            +LCN
Sbjct: 186 YVLCN 176

BLAST of HG10008934 vs. ExPASy TrEMBL
Match: A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 62/185 (33.51%), Postives = 104/185 (56.22%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGN 69
           ++K +EEL  M++ Q+     Y+T L  + +A+ +W R+FFF +SQ + + S L C   +
Sbjct: 9   MQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQTSPNSSLLHCK--H 68

Query: 70  LWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNID 129
            W++ AL+C  + +Y+LLF+  +L+L +TE QL++I +   QL++QIW ++ +     I+
Sbjct: 69  WWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQELPQMIE 128

Query: 130 PSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACK 189
           P IM+                  IIN         +RK Y+  I C  + + ALELYA +
Sbjct: 129 PIIMDH-----------------IINGEMGRTSTFERKLYINCILCGFIGIVALELYASR 174

Query: 190 SMLCN 195
           S+LCN
Sbjct: 189 SLLCN 174

BLAST of HG10008934 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-20
Identity = 70/185 (37.84%), Postives = 111/185 (60.00%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGN 69
           L++  E LKD+ EKQE+   Y++++   + +AY IW R+FFF +SQ   S S L C   +
Sbjct: 6   LKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQ--TSSSLLKCI--D 65

Query: 70  LWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNID 129
            W++L LS  C+ VY L F++A  +LY+ +HQ+++I +  A++ +QI   + +  D ++ 
Sbjct: 66  WWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVDL- 125

Query: 130 PSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACK 189
              MEAGD  S+ G +    + L+     AF R  +RKFY+     ALLAV A+ELYAC 
Sbjct: 126 --AMEAGD--SSDGFQFSFHVKLL--EYGAF-RIVERKFYICATVSALLAVTAIELYACS 178

Query: 190 SMLCN 195
            + C+
Sbjct: 186 WLYCD 178

BLAST of HG10008934 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19
Identity = 74/185 (40.00%), Postives = 109/185 (58.92%), Query Frame = 0

Query: 10  LEKRMEELKDMSEKQEAIANYYDTKLHTVIVAYFIWERVFFFFVSQKTNSPSSLSCNNGN 69
           L ++  ELKD++EKQE+   Y++ K   ++  Y I  R+FFF +SQ     SS  C+  +
Sbjct: 6   LRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQ----TSSSKCH--D 65

Query: 70  LWVILALSCLCSLVYMLLFVDAALILYQTEHQLNLILQTHAQLYRQIWTIKREAADTNID 129
            WVIL+LS LCS VY LLF+DAA  LYQT+ QL++I +   ++ +QI  + +   D ++ 
Sbjct: 66  WWVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQI-LVAQNQDDVDL- 125

Query: 130 PSIMEAGDDQSNQGLRPEEELILIINSNSAFRRRGQRKFYVYTIFCALLAVAALELYACK 189
              ME GD          E+++++      FR  G RK Y+Y   CAL+AV A+ELY  K
Sbjct: 126 --AMEGGDFSDGFEFGFHEKMLVL----DHFRFVG-RKVYIYFTVCALVAVTAIELYVSK 175

Query: 190 SMLCN 195
            +LCN
Sbjct: 186 YLLCN 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6579352.12.5e-5064.89hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579344.11.1e-4862.05hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6579345.11.8e-4861.93hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8650729.13.4e-4760.91hypothetical protein Csa_023412 [Cucumis sativus][more]
XP_022157182.15.9e-2340.54uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8222.8e-4763.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1[more]
A0A6J1DSQ02.8e-2340.54uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A0A0KUT01.3e-2033.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1[more]
A0A6J1DS872.3e-2037.84uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX741.5e-1940.00uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 9..194
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 9..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008934.1HG10008934.1mRNA