HG10008933 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008933
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 1-like
Location	Chr06: 833172 .. 834838 (-)
RNA-Seq Expression	HG10008933
Synteny	HG10008933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGTAGTACTGGGGAGGACCCTAACATTGCAAATAAATGTGAGTCGAATCCATTGAGTCCGATAAGAGAGAACAAACGTATTAGGACTTCTGGGGCTCACGATCATTTTAATGAAGTTGATAATGGGGATTCTGATTGGCCAAAGCCAACAAAGTGGAATATCATTGCATATCCATGTGATGATGAACAAAAGAAAAACCCCACCAAAGTAGAGCAAATAATACTTAACTGTGAAAAGCATCCAAGTAGAAAATGTAACTCGAAGCAAAAGAGGTTGCTTGATAGTCAGTCAGAGGATAAAGAGGGAGAAGGTAGTAACTGTAGTTCGCTTGGTGATTTCTTTAGCATGAGGAAGGGTAGAGAAGCACTTTATAGGATGATTATTTTTCAGAAATTGGCTTTTCGGATAGTGGACTCTCCATTATTTCAAACATTTTCCCATTCAATACAACCTGGATTTATTATGCCTTCATGTAAAACTGCTGTTAAGGAGTGTAAAGCACTTTATTTAGAGGAGAAGGAAAAATTGAAAACATTTTCCCATTGAAGGGGATACCATGGATCATAAAGAAGATACCATTGATAATGAAGAAGATACCATTGATGGTTATACCATTGAAGGAGATACCGTTGGACAAATGATTGAAACATGTCTATTGGATTGGGGAATTGAGAAGATACTTGGTAGAGAAAATAAGAGATTGGAATGGGACTGTATTAAATGGTGACTTCATGCATGTTAAATCTTGTCTACAAATTGTTAAGCTTATGGTTCATGATGCTTTGAAGGAACTTGGTGGCTCGATTGACAGGATTCGTAATGCTGTTGAATATGTAAAAAATTCTTCACCTAAACTATTGGAAAGTTTCAAAAGTTATGCAAGGGATCACAAAATATCATGGATTAAGAATCCTCTTTATGTGGATGTTCCTACTAGGTGGAATACCATATACACTATGTTGTACAGAGCTGAGAAATTTCAAAAGGCTTTTGAAAACTTAGAGGCTGAGGATAAGGAGTTTTGCCACTTGGTATTTTATGATAACGACAGAAAATTGGACCCTCCCATTAGTGAAGATTGGGACAATGCTCTTGCTTTTTTGAAGCTTTTGAAATTGTTTCATGATGTTACTTTGAGGATTACAAAATCACCGTGTGTAACATCAGAATAGATATTTTCATGAGATTTGCTTAATTAAAAAAAAAAGATTGAAGAGTATTCAAGATCTGACAACTCTCTCTTGGCTAACACCGCAAGAAATATGAAGGTGAAGTATGAAACATTGTGGGAGCACAATGAAAACACAAATTTTCTCTTGTATGTTCCCATTGTACTTGACCCCCGATACAAGCTCCAATTTGTATCCTTCACTCTGTCACTTTTGTATGAGGAGGAAAGGTCAAATGAAATTCTTAAGAAAATTGTGGATATGACAAGAAGTTTATATAATGACTACCAAACTTCAAATGTGGAGAGTGAGATTGCATGTACATCTATGGATCAACCATTAACGGAAGACGCGGGAGAAGAAGATGACGAAGATTATGCCTCTATGTTTACTAAATACTTGATCGAGCAAGATAACAAGATATCAGAACTAGATAAGTATTTATCTCATCCAATTGAGATAGCCGATGAAACATTTGATATATTAGATTGA

mRNA sequence

ATGGATCGTAGTACTGGGGAGGACCCTAACATTGCAAATAAATGTGAGTCGAATCCATTGAGTCCGATAAGAGAGAACAAACGTATTAGGACTTCTGGGGCTCACGATCATTTTAATGAAGTTGATAATGGGGATTCTGATTGGCCAAAGCCAACAAAGTGGAATATCATTGCATATCCATGTGATGATGAACAAAAGAAAAACCCCACCAAAGTAGAGCAAATAATACTTAACTGTGAAAAGCATCCAAGTAGAAAATGTAACTCGAAGCAAAAGAGGTTGCTTGATAGTCAGTCAGAGGATAAAGAGGGAGAAGAGTATTCAAGATCTGACAACTCTCTCTTGGCTAACACCGCAAGAAATATGAAGGTGAAGTATGAAACATTGTGGGAGCACAATGAAAACACAAATTTTCTCTTGTATGTTCCCATTGTACTTGACCCCCGATACAAGCTCCAATTTGTATCCTTCACTCTGTCACTTTTGTATGAGGAGGAAAGGTCAAATGAAATTCTTAAGAAAATTGTGGATATGACAAGAAGTTTATATAATGACTACCAAACTTCAAATGTGGAGAGTGAGATTGCATGTACATCTATGGATCAACCATTAACGGAAGACGCGGGAGAAGAAGATGACGAAGATTATGCCTCTATGTTTACTAAATACTTGATCGAGCAAGATAACAAGATATCAGAACTAGATAAGTATTTATCTCATCCAATTGAGATAGCCGATGAAACATTTGATATATTAGATTGA

Coding sequence (CDS)

ATGGATCGTAGTACTGGGGAGGACCCTAACATTGCAAATAAATGTGAGTCGAATCCATTGAGTCCGATAAGAGAGAACAAACGTATTAGGACTTCTGGGGCTCACGATCATTTTAATGAAGTTGATAATGGGGATTCTGATTGGCCAAAGCCAACAAAGTGGAATATCATTGCATATCCATGTGATGATGAACAAAAGAAAAACCCCACCAAAGTAGAGCAAATAATACTTAACTGTGAAAAGCATCCAAGTAGAAAATGTAACTCGAAGCAAAAGAGGTTGCTTGATAGTCAGTCAGAGGATAAAGAGGGAGAAGAGTATTCAAGATCTGACAACTCTCTCTTGGCTAACACCGCAAGAAATATGAAGGTGAAGTATGAAACATTGTGGGAGCACAATGAAAACACAAATTTTCTCTTGTATGTTCCCATTGTACTTGACCCCCGATACAAGCTCCAATTTGTATCCTTCACTCTGTCACTTTTGTATGAGGAGGAAAGGTCAAATGAAATTCTTAAGAAAATTGTGGATATGACAAGAAGTTTATATAATGACTACCAAACTTCAAATGTGGAGAGTGAGATTGCATGTACATCTATGGATCAACCATTAACGGAAGACGCGGGAGAAGAAGATGACGAAGATTATGCCTCTATGTTTACTAAATACTTGATCGAGCAAGATAACAAGATATCAGAACTAGATAAGTATTTATCTCATCCAATTGAGATAGCCGATGAAACATTTGATATATTAGATTGA

Protein sequence

MDRSTGEDPNIANKCESNPLSPIRENKRIRTSGAHDHFNEVDNGDSDWPKPTKWNIIAYPCDDEQKKNPTKVEQIILNCEKHPSRKCNSKQKRLLDSQSEDKEGEEYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEERSNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTEDAGEEDDEDYASMFTKYLIEQDNKISELDKYLSHPIEIADETFDILD

Homology

[Close]

BLAST of HG10008933 vs. NCBI nr
Match: CAN61798.1 (hypothetical protein VITISV_044291 [Vitis vinifera])

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-20
Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 106 EYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEE 165
           +Y +S++ LL++ A+NMK KY+  W + + +N LLYV +VLDPRYKL+FV F    LY++
Sbjct: 317 KYLKSNDLLLSDMAQNMKAKYDKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDK 376

Query: 166 ERSNEILKKIVDMTRSLYNDYQTSNVESEIA-CTSMDQPLTEDAGEEDDEDYASMFTKYL 225
           E + ++  ++VD+ R LY++Y+     +E+       QP   + GE+DD ++   FT++L
Sbjct: 377 EVAKDMSTRVVDVLRKLYDEYRLLYFHNEVCDLEEFSQPKESELGEQDDLNFVYTFTRHL 436

Query: 226 IEQDN--KISELDKYLSHPIEIADETFDIL 253
            E+ N    SELD YLS   E  D+ FDIL
Sbjct: 437 YEEHNVESKSELDWYLSESNERVDDGFDIL 466

[Close]

BLAST of HG10008933 vs. NCBI nr
Match: XP_030936903.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus lobata])

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-15
Identity = 53/152 (34.87%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 108 SRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEER 167
           SRS++++L N A +M+ KY+  WE+ +N NFLLYV +VLDPRYKL+++ F+   +YE+ +
Sbjct: 178 SRSEDNMLKNMAASMRKKYDKYWENIKNINFLLYVAVVLDPRYKLRYIMFSFKQVYEKSK 237

Query: 168 SNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTE----DAGEEDDEDYASMFTKY 227
           + E+   +    + LY  Y   +  + IA  S+ Q   E    D  E+D + ++  + K+
Sbjct: 238 AEELTAMVEAKLKKLYEHYLQKDTSANIAKPSVSQTFEEMDVDDEEEDDSKSFSFQYKKH 297

Query: 228 LIEQDN--KISELDKYLSHPIE-IADETFDIL 253
           L E ++    SE+D++L+   E + +  FDIL
Sbjct: 298 LEEAESLENKSEVDRFLTENCEGLGNAEFDIL 329

[Close]

BLAST of HG10008933 vs. NCBI nr
Match: RLN15539.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Panicum miliaceum])

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-14
Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 106 EYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEE 165
           E +  ++  L++ A +MK+K++  W+H  N N+LL++ ++LDPRYKLQ++ F L L+Y  
Sbjct: 442 EIAGEEDPTLSSMAYHMKLKFDKYWKHEGNLNYLLFIAVILDPRYKLQYLGFCLELMYGP 501

Query: 166 ERSNEILKKIVDMTRSLYNDY-QTSNVESEIACTSMDQPLTEDAGEEDDED----YASMF 225
           +   E+ +KI      L+  + +T N  S     S   P+  +  EED+E+     AS F
Sbjct: 502 DEGKELTEKIESALNELFGCFVETVNASSSRNRGSNQYPVHINVDEEDEENPWDMLASQF 561

Query: 226 TKYL--IEQDNKISELDKYLSHPIEIADETFDILD 254
            +++  +E ++  SEL KYL+   E   + FDILD
Sbjct: 562 ERHMEEVESESNDSELSKYLADKREKRTKEFDILD 596

[Close]

BLAST of HG10008933 vs. NCBI nr
Match: XP_023892692.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus suber])

HSP 1 Score: 84.3 bits (207), Expect = 1.6e-12
Identity = 51/152 (33.55%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 108 SRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEER 167
           S S++++L N A +M+ KY+  WE+ +N NFLLYV +VLDP YKL+++ F+   +YE  +
Sbjct: 260 STSEDNMLKNMAASMRKKYDKYWENIKNINFLLYVAVVLDPHYKLRYIMFSFKQVYENSK 319

Query: 168 SNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTEDAGEEDDED----YASMFTKY 227
           + E+   +      LY  Y   +  + +A  S+ Q   E   ++++ED    +A  + KY
Sbjct: 320 AEELTTMVKATLTKLYKHYLQKDTSANVAKPSVSQTFEEMDVDDEEEDANKLFAFQYKKY 379

Query: 228 LIEQDN--KISELDKYLSHPIE-IADETFDIL 253
           L E ++    SE D+ L+   E +++  FDIL
Sbjct: 380 LEEAESLENKSEGDRSLTKNCEGLSNAEFDIL 411

[Close]

BLAST of HG10008933 vs. NCBI nr
Match: XP_028081659.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Camellia sinensis])

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-12
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 106 EYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEE 165
           + S+S +++L+N A  MK+KY+  WE+ +N NFLLYV +VLDPRYKL ++ F+ + +YE 
Sbjct: 104 QLSKSGDAVLSNMADKMKLKYDKYWENLDNINFLLYVAVVLDPRYKLTYLKFSFNKVYEN 163

Query: 166 ERSNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQ-PLTEDAGEEDDED----YASMF 225
           ++   ++ ++      L++ Y   N    +A +   Q P   +  EE++ED    +AS +
Sbjct: 164 DKVEILVARVKATLERLFDHYVEKNNVGNVAPSYASQAPQVMEVDEEEEEDPMTLFASQY 223

Query: 226 TKYLIEQ---DNKISELDKYL-SHPIEIADETFDILD 254
             +L  +   +NK SEL+KYL    ++     FDIL+
Sbjct: 224 INHLESEKSVENK-SELEKYLVDDCVDPRVPNFDILN 259

[Close]

BLAST of HG10008933 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 38/145 (26.21%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 111 DNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEERSNE 170
           ++  +   A+ M+ K +  W    + + +L + +V+DPR+K++ V F+ S ++ E+    
Sbjct: 484 EDPFVTGIAKTMQEKVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN 543

Query: 171 ILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTEDAGEEDDEDYASMFTKYLIEQ--D 230
           I K + D    L+ +Y               Q  T + G+ D     S F  Y++E    
Sbjct: 544 I-KTVDDGIHELFTEYM---------ALPSPQNTTSEGGKADG---LSDFDTYIMETTGQ 603

Query: 231 NKISELDKYLSHPIEIADETFDILD 254
           N  SELD+YL   +    + FD+LD
Sbjct: 604 NLKSELDQYLDETLLPRVQEFDVLD 612

[Close]

BLAST of HG10008933 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.2e-04
Identity = 38/146 (26.03%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 111 DNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEERSNE 170
           ++ +  +TA+ M  +++  W   ++ N +L + +V+DPR+K++ V F+ S ++  E + +
Sbjct: 530 EDPIFRSTAKIMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAA-K 589

Query: 171 ILKKIVDMTRSLYNDYQTSNVESEIA-CTSMDQPLTEDAGEE--DDEDYASMFTKYLIEQ 230
            +K + D    LY++Y T    +  A  T     +T   G+E  D + Y S     +   
Sbjct: 590 YVKVVDDAIHELYSEYATQGEANRDAHVTDNSAAVTPPNGDELLDFDIYLS----EIATS 649

Query: 231 DNKISELDKYLSHPIEIADETFDILD 254
              ISEL++YL   +    + F+IL+
Sbjct: 650 QPSISELEQYLEEALMPRIQDFEILE 667

[Close]

BLAST of HG10008933 vs. ExPASy TrEMBL
Match: A5BUV6 (BED-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_044291 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.7e-21
Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 106 EYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEE 165
           +Y +S++ LL++ A+NMK KY+  W + + +N LLYV +VLDPRYKL+FV F    LY++
Sbjct: 317 KYLKSNDLLLSDMAQNMKAKYDKYWGNLKRSNLLLYVVVVLDPRYKLKFVQFCFDQLYDK 376

Query: 166 ERSNEILKKIVDMTRSLYNDYQTSNVESEIA-CTSMDQPLTEDAGEEDDEDYASMFTKYL 225
           E + ++  ++VD+ R LY++Y+     +E+       QP   + GE+DD ++   FT++L
Sbjct: 377 EVAKDMSTRVVDVLRKLYDEYRLLYFHNEVCDLEEFSQPKESELGEQDDLNFVYTFTRHL 436

Query: 226 IEQDN--KISELDKYLSHPIEIADETFDIL 253
            E+ N    SELD YLS   E  D+ FDIL
Sbjct: 437 YEEHNVESKSELDWYLSESNERVDDGFDIL 466

[Close]

BLAST of HG10008933 vs. ExPASy TrEMBL
Match: A0A7N2KQS5 (BED-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.7e-16
Identity = 54/152 (35.53%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 108 SRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEER 167
           SRS++++L N A +M+ KY+  WE+ +N NFLLYV +VLDPRYKL+++ F+   +YE+ +
Sbjct: 466 SRSEDNMLKNMAASMRKKYDKYWENIKNINFLLYVAVVLDPRYKLRYIMFSFKQVYEKSK 525

Query: 168 SNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTE----DAGEEDDEDYASMFTKY 227
           + E+   +    + LY  Y   +  + IA  S+ Q   E    D  E+D + +A  + K+
Sbjct: 526 AEELTAMVEAKLKKLYEHYLQKDTSANIAKPSVSQTFEEMDVDDEEEDDSKSFAFQYKKH 585

Query: 228 LIEQDN--KISELDKYLSHPIE-IADETFDIL 253
           L E ++    SE+D++L+   E + +  FDIL
Sbjct: 586 LEEAESLENKSEVDRFLTENCEGLGNAEFDIL 617

[Close]

BLAST of HG10008933 vs. ExPASy TrEMBL
Match: A0A7N2MJW3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.7e-16
Identity = 54/152 (35.53%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 108 SRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEER 167
           SRS++++L N A +M+ KY+  WE+ +N NFLLYV +VLDPRYKL+++ F+   +YE+ +
Sbjct: 421 SRSEDNMLKNMAASMRKKYDKYWENIKNINFLLYVAVVLDPRYKLRYIMFSFKQVYEKSK 480

Query: 168 SNEILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTE----DAGEEDDEDYASMFTKY 227
           + E+   +    + LY  Y   +  + IA  S+ Q   E    D  E+D + +A  + K+
Sbjct: 481 AEELTAMVEAKLKKLYEHYLQKDTSANIAKPSVSQTFEEMDVDDEEEDDSKSFAFQYKKH 540

Query: 228 LIEQDN--KISELDKYLSHPIE-IADETFDIL 253
           L E ++    SE+D++L+   E + +  FDIL
Sbjct: 541 LEEAESLENKSEVDRFLTENCEGLGNAEFDIL 572

[Close]

BLAST of HG10008933 vs. ExPASy TrEMBL
Match: A0A3L6S4I0 (Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM02G25550 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = 0


Query: 106 EYSRSDNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEE 165
           E +  ++  L++ A +MK+K++  W+H  N N+LL++ ++LDPRYKLQ++ F L L+Y  
Sbjct: 442 EIAGEEDPTLSSMAYHMKLKFDKYWKHEGNLNYLLFIAVILDPRYKLQYLGFCLELMYGP 501

Query: 166 ERSNEILKKIVDMTRSLYNDY-QTSNVESEIACTSMDQPLTEDAGEEDDED----YASMF 225
           +   E+ +KI      L+  + +T N  S     S   P+  +  EED+E+     AS F
Sbjct: 502 DEGKELTEKIESALNELFGCFVETVNASSSRNRGSNQYPVHINVDEEDEENPWDMLASQF 561

Query: 226 TKYL--IEQDNKISELDKYLSHPIEIADETFDILD 254
            +++  +E ++  SEL KYL+   E   + FDILD
Sbjct: 562 ERHMEEVESESNDSELSKYLADKREKRTKEFDILD 596

[Close]

BLAST of HG10008933 vs. ExPASy TrEMBL
Match: A0A3L6T191 (Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM05G18110 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-12
Identity = 50/146 (34.25%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 115 LANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEERSNEILKK 174
           L++ A +MK+K++  W+   N N+LL++ ++LDPRYKLQ++ F L L Y  +   E+ +K
Sbjct: 18  LSSMAYHMKLKFDKYWKQESNLNYLLFIAVILDPRYKLQYLGFCLELTYGPDEGKELAEK 77

Query: 175 IVDMTRSLYNDY-QTSNVESEIACTSMDQPLTEDAGEEDDED----YASMFTKYL--IEQ 234
                  L+  Y +T N  S     S   P+  +  EED+E+     AS F +++  +E 
Sbjct: 78  SESALNELFGCYVETVNASSSRNRGSNQYPVHINVDEEDEENPWDMLASQFERHMKEVES 137

Query: 235 DNKISELDKYLSHPIEIADETFDILD 254
           +   SEL +YL+   E   + FDILD
Sbjct: 138 EPNDSELSRYLADKREKRTKEFDILD 163

[Close]

BLAST of HG10008933 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 38/145 (26.21%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 111 DNSLLANTARNMKVKYETLWEHNENTNFLLYVPIVLDPRYKLQFVSFTLSLLYEEERSNE 170
           ++  +   A+ M+ K +  W    + + +L + +V+DPR+K++ V F+ S ++ E+    
Sbjct: 484 EDPFVTGIAKTMQEKVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN 543

Query: 171 ILKKIVDMTRSLYNDYQTSNVESEIACTSMDQPLTEDAGEEDDEDYASMFTKYLIEQ--D 230
           I K + D    L+ +Y               Q  T + G+ D     S F  Y++E    
Sbjct: 544 I-KTVDDGIHELFTEYM---------ALPSPQNTTSEGGKADG---LSDFDTYIMETTGQ 603

Query: 231 NKISELDKYLSHPIEIADETFDILD 254
           N  SELD+YL   +    + FD+LD
Sbjct: 604 NLKSELDQYLDETLLPRVQEFDVLD 612

The following BLAST results are available for this feature:

BLAST of HG10008933 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN61798.1	1.6e-20	40.67	hypothetical protein VITISV_044291 [Vitis vinifera]	[more]
XP_030936903.1	2.6e-15	34.87	zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus lobata]	[more]
RLN15539.1	5.0e-14	34.19	zinc finger BED domain-containing protein RICESLEEPER 1-like [Panicum miliaceum]	[more]
XP_023892692.1	1.6e-12	33.55	zinc finger BED domain-containing protein RICESLEEPER 2-like [Quercus suber]	[more]
XP_028081659.1	3.6e-12	34.39	zinc finger BED domain-containing protein RICESLEEPER 2-like [Camellia sinensis]	[more]

BLAST of HG10008933 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2N5	1.7e-04	26.21	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
Q75HY5	2.2e-04	26.03	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]

BLAST of HG10008933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BUV6	7.7e-21	40.67	BED-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_044291 P...	[more]
A0A7N2KQS5	5.7e-16	35.53	BED-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A7N2MJW3	5.7e-16	35.53	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A3L6S4I0	2.4e-14	34.19	Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Panicum miliaceu...	[more]
A0A3L6T191	3.8e-12	34.25	Zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Panicum miliaceu...	[more]

BLAST of HG10008933 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.2e-05	26.21	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 106..186 e-value: 1.6E-13 score: 50.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..109
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 94..237
None	No IPR available	PANTHER	PTHR23272:SF137	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE	coord: 94..237
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 121..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008933.1	HG10008933.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding