HG10008931 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008931
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	WD repeat-containing protein 91-like protein
Location	Chr06: 815898 .. 820069 (-)
RNA-Seq Expression	HG10008931
Synteny	HG10008931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTTGAAGAATTGAAGGGGAAATTTGATGAGCTGAAGGTTGTTGCTGAAAACCAAGAGCAGAGAGTGCGTTACTATGAAACTAGAGCCCAGAATGTAGCTATTGCCTGTCTCAAACTTCTTCGTCCCTGTCCCTCAATTGCACTAATCGGTGGATGGTTTTGGGTTTTAGTCTATCATGTACGTCTCTCTACTTTTTGTTTTTCCTTGAGGCTGTTATCTTGTTGTATCGGGCTCAGAACCACTTGGACATGATTTTAAAGAAACAGATTGAAATCTCCCAACAGATTTTGAATGATGATGATGAGGCTGGAGATTCAAGTTCAAGTGATGGGTTGGAGTTGAGTTTCCAGGTGCAGTTACTTGAGTACCATCCATTTAGAATTCTCCAGAGGAAAGTTTATATTGCCTCCACTCTCTGTGCTCTGCTTTCTGTTGCTGCTTTTGAACTATACGCTTGTAAGCTCTTGTTGTGCAATTCAACTGAAGAGTGATCTGTTGACCTACTGGTAAACTTACAATTTGTTTCAAGTTTTGTGTTGTGGTTATAAAATCTCCATAGTAGAGATTGTTATAGAATAAAAGGATTCGAGGTAACCGAGCACCAGTATAGGGAGATGTTATGTTTATGTCATTAAGGGTCCTTGGTTGGTTTTCTGCTTGTATGGTTGTAAAAATATATCTAGACTCCTAGACATTATGAAGGGTCATACATTTGTTTTCTGCTTCGTTGATTGAGATAATATATCTAGACATATATCCACTCCACTGAGCTTTCCCTTTTCCTCCTCTGTATCTAAACTACTTATGAGTAGATTCAGTCCATTTCATCATTGCACTTCCAATTTTACTTGAAGTACAACAATGTTAATTAGTCGAATAAAATTGTGCTTCTATTCATATTCTCAATACTCTTCCTTTTACTTATGGGGTTAAAAATCAACAATAGCATATGAGTCAGTGACCATGAATTTTCTACAAAAGCCTTCTAATGATCTCCAAAAGGTCTCCAATGTGAACATTGTGTACTTACAGAAGAACTTGTGAAGAGTATGCCATTTTGAGGCAGTGTACTATGCAAGATCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAATAATTAGTCTTATTTGTGATTATCCTCGGGCTTCTTTCCTTTTGGAGAATCTAAATGAGAGTTGTATAGGCACTTGACCGAAGGATTCTAACTCTATCCTTGAACCATCTGCCTAAGAGGATCTCAGGAAGCCATTCTTCTCCATTACTTGGACAATAACAAAATATTAACCAGTGGTCTATTGATTGAGATAGGTTCAATTGGGTTTATGGAAAATTTTCGAATTTCTAGTAAAATATACACAAACAGCTTCCAGATAGATACCTGGTCTAAAATTCAGAACCCACTCTTTTTTTGGCGTTACTTCAAGTACAATCTGGATTTTCACTTGCCATACTTCAATTGGGTTTATAGGTATTCTACGCAGGATACTGAATGTCTTACCTTAGTTGACAGAGTAGAAACCTAAGATTCTGTTTTTTTTTTCATGCTAATCATGTTATTGAGGTGTTTCAGATTTTTCTACTATCAAGACAAGAAAATATTGTGTTGCTAGTGCTAATTTAAATTGGTTGTTTTTTTGCTGAGTGCTCGTTCAAAGTTTCAAACCATAGTTTCTTGTAAGTTTATATTACTTGGTCCTTGCTGGTGCTAGTCAATTCTCCCATGCTTTTGATTTCTGGTTGATGGTGGAGTTCATCTTTATTTACTTGTAACGAAGGGTAAATCTTTGGGAAGATTCTATGGTTCTCCTGTCTATCCTGCTATCTCCATATCGATAAAAGAACCCCCCCCCCACAAGTTCTCCGACTTTAATTCTCTGTACTCTTCACCCTTCACTCTTCTTTGATTCACAATGAATAACCAGTGACCTATTAGTTGAGATGGGTTCAATTGTGTTTATTGAATTTTTCAAATTTCTAGTGGAATATACACAAACAGCTTCAGATTAAAAAAAAAAAAACCTAGTCTATAATTTACGACCCACTCTTTTGTTGGTTTTTCACATTTCCTTAGGCCAATGTGAGTTTAGCTTAGTGGTAATTGGTCCCTCCCTTGAGGTTAGAGGTTTGATCTTCCATCTCCACAATTGTTGTACTTCACTTTTCCTGGGTGATTATTGCATCCACAGCAGCTTACTCTATTGGCTTTTTGGCAATTTTCTTGGTTATTAGCACATTACAGGACTTGGCTCCTTTTTGCTCTACTGTATTGTTTTGTTGCCTTTGCTGCAACTATTTGTTCTTTTTTGTTGTTAATTAATTTTTTCGGCTCAATTTGTCTGCTTTGATGACTTTTTTTCTTCATGTTTTTCACTCATTCTATCTTAGCTTTGCTCTATCAAATACTATTGTTATTTGAAAATGAGGCTTGGTTTATCATTTGATTCAATGCACCCATTCCTGCATTTTTTATGTTTTAGGGAAAGGATGCTACACTTATTGGATTGGATGCTGGTACCTATGCTTTAGATGAATTAATCCATAGCCATCTCGACCTCGGAGGTGGTAGTAAAGTTAAAGAGATGACATCAGAGGCCAAAGCATATTTTACTTTTGGATTGGTGAGGCTTTCTTCACTTCGACAAAATGTCATGATATAGCTGTGTAATATAGCATTGGTACAAAAGTTTAGGACCCGTTTGGATTGACTTTTTAAATGCTTAAAAAAGTATTTATAAGTGCAAAAACAAGTGTTTATAAACACTTAGAAATTAAATCCAAACGGACCCTTAGTCTTGGATTCTAATTTTGTTTTTCAGCTTTCTAAGATGCATTTGACAAGGGGTGTTAGTTTGGGGGGTTGGTAAATCCTATGCTTCAATTTTTTCTCATAACAATCGTATTGATTATTTTAAAAAAAAAAATTATTTAAAAGAGTTGTTTCTGAGCTTCTATGGTCTTTGCATGACTTTCAGTATTGGAAATAAAAAAGTAGAGACCACATCATATTATCTTGTGTGATTCTTATCTGACTTTAGTTATGGAAACTTTAAATTAAAAATTTTGTTCAATTTGCAACTTTTCCAGGACAAAGGTTGAAATCTTGAAATATCATCTGTCAAAGATTTTGTACAAACGAACAATGGAAGAGTATCACGTGTTTTCATTCACTACACAAATTGAAGGCTGCAAGGTTTTTGGAGGCATTTTTCTTGCAACTCTTTTTTTCTGTATTTCCACTCTAATCCATCCAACTAAATACTTTAATCTCCCCTCTTCCTTCCAAGAAGCCAGAAGAATGTCCTCTTGCTTACCAAACCTTTTTTTGGCATTTGAAGTAGGGACATAATACAAAAGGATACGAGGTAAAACAAAATTACTTGTAGTTAACCTTCCTCTTGAAAGTTGAAAGTTGTTTCCTGTTATAATGTATATTGATTATGTGCATTAGGATAAATATCCTACATCTTGAGGTTTATTAGTATTGTATTCTTGTCTTTTATTGTGATTTTACCTTCTTTTAATTCAGGACTCCCATGTAAACCAGTATGGTGATCTACATTGCAGGCTGATTGCAGAGCCTTCGACGAAAAAGAAATGCGAAGGAAACGCAGAGCAGACTGCAAGACGCGATATACAACCAAAAGAATTTGAATCCACAGAGTAAAAACATTGCAACTTGGAGCAGGAAGATGATTATGATGGTTATGGAACATATGGTTCTGGTCTGAATTATGAGAATTTGGAAGAAATACAAGATTATGGTTATGGTGAATACGGTTGACAATGCATATTTAGCCATTTGAGATTGCGAGCTAATGTTTGCTGTCAATAGTTATAGCCATTTTGTTGCCCTGTATTCAATTATATGAACATTAGGCAAGATGCAATTTGTATTATCTTTGATCTTTCTGTTCCCAGTCATGGCGGTTGGAGACTTGAGGAGCTTTGAGGAACTGAAAGTTATTAACAAGGAGCAAGAAACAAAGGTGTGTTACCATGAAAGCAAAGTTCAGAATTTGGTAATTGGCTACCTCATTTTCGGACGATTGCTCTTCTCTGGATGCTGCCACTATGTTGTGTCGGACCCAATACCAACAGAATATAATCCGGAAGGAAGTAATGGAAGTTTGCCAACGAATTTTGGTTACGCAAAACCAAAATGA

mRNA sequence

ATGGGATTTGAAGAATTGAAGGGGAAATTTGATGAGCTGAAGGTTGTTGCTGAAAACCAAGAGCAGAGAGTGCGTTACTATGAAACTAGAGCCCAGAATGTAGCTATTGCCTGTCTCAAACTTCTTCGTCCCTGTCCCTCAATTGCACTAATCGGTGGATGGTTTTGGGTTTTAGTCTATCATGGAAAGGATGCTACACTTATTGGATTGGATGCTGGTACCTATGCTTTAGATGAATTAATCCATAGCCATCTCGACCTCGGAGGTGGTAGTAAAGTTAAAGAGATGACATCAGAGGCCAAAGCATATTTTACTTTTGGATTGGAAGATGATTATGATGGTTATGGAACATATGGTTCTGGTCTGAATTATGAGAATTTGGAAGAAATACAAGATTATGGTTATGTCATGGCGGTTGGAGACTTGAGGAGCTTTGAGGAACTGAAAGTTATTAACAAGGAGCAAGAAACAAAGGTGTGTTACCATGAAAGCAAAGTTCAGAATTTGGTAATTGGCTACCTCATTTTCGGACGATTGCTCTTCTCTGGATGCTGCCACTATGTTGTGTCGGACCCAATACCAACAGAATATAATCCGGAAGGAAGTAATGGAAGTTTGCCAACGAATTTTGGTTACGCAAAACCAAAATGA

Coding sequence (CDS)

ATGGGATTTGAAGAATTGAAGGGGAAATTTGATGAGCTGAAGGTTGTTGCTGAAAACCAAGAGCAGAGAGTGCGTTACTATGAAACTAGAGCCCAGAATGTAGCTATTGCCTGTCTCAAACTTCTTCGTCCCTGTCCCTCAATTGCACTAATCGGTGGATGGTTTTGGGTTTTAGTCTATCATGGAAAGGATGCTACACTTATTGGATTGGATGCTGGTACCTATGCTTTAGATGAATTAATCCATAGCCATCTCGACCTCGGAGGTGGTAGTAAAGTTAAAGAGATGACATCAGAGGCCAAAGCATATTTTACTTTTGGATTGGAAGATGATTATGATGGTTATGGAACATATGGTTCTGGTCTGAATTATGAGAATTTGGAAGAAATACAAGATTATGGTTATGTCATGGCGGTTGGAGACTTGAGGAGCTTTGAGGAACTGAAAGTTATTAACAAGGAGCAAGAAACAAAGGTGTGTTACCATGAAAGCAAAGTTCAGAATTTGGTAATTGGCTACCTCATTTTCGGACGATTGCTCTTCTCTGGATGCTGCCACTATGTTGTGTCGGACCCAATACCAACAGAATATAATCCGGAAGGAAGTAATGGAAGTTTGCCAACGAATTTTGGTTACGCAAAACCAAAATGA

Protein sequence

MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACLKLLRPCPSIALIGGWFWVLVYHGKDATLIGLDAGTYALDELIHSHLDLGGGSKVKEMTSEAKAYFTFGLEDDYDGYGTYGSGLNYENLEEIQDYGYVMAVGDLRSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSGCCHYVVSDPIPTEYNPEGSNGSLPTNFGYAKPK

Homology

[Close]

BLAST of HG10008931 vs. NCBI nr
Match: KAA0042577.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05981.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-11
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 137 MAVGDLRSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           MA GDLRSFEE+ VI KEQE KVCYHE+KVQNLVIGYL+FGRLL  G
Sbjct: 1   MASGDLRSFEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFG 47

[Close]

BLAST of HG10008931 vs. NCBI nr
Match: XP_011654634.1 (uncharacterized protein LOC105435426 isoform X1 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-09
Identity = 35/44 (79.55%), Postives = 39/44 (88.64%), Query Frame = 0


Query: 137 MAVGDLRSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLL 181
           M   DLRSF+ELKVI KEQE +VC+H+SKVQNLVIGYLIFGRLL
Sbjct: 1   MEFRDLRSFQELKVIYKEQEERVCHHDSKVQNLVIGYLIFGRLL 44

[Close]

BLAST of HG10008931 vs. NCBI nr
Match: KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-06
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL 40
          M F+ELK KFD LK +AE QEQRVRYYETRAQNV IACL
Sbjct: 3  MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACL 41

[Close]

BLAST of HG10008931 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-06
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 137 MAVGDL-RSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           MA+G+L R FEELK IN++QE++V Y+E+KVQN+V GYLIF RL F G
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFG 48

[Close]

BLAST of HG10008931 vs. NCBI nr
Match: KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-05
Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 136 VMAVGDL-RSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           VMA G+L R  +EL  +N++QETKVCYH++KVQN+V GYLI+ RL F G
Sbjct: 35  VMAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYG 83

[Close]

BLAST of HG10008931 vs. ExPASy TrEMBL
Match: A0A5A7TLI0 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00770 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11
Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 137 MAVGDLRSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           MA GDLRSFEE+ VI KEQE KVCYHE+KVQNLVIGYL+FGRLL  G
Sbjct: 1   MASGDLRSFEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFG 47

[Close]

BLAST of HG10008931 vs. ExPASy TrEMBL
Match: A0A0A0KND2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139800 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.9e-10
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 137 MAVGDLRSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           M   DLRSF+ELKVI KEQE +VC+H+SKVQNLVIGYLIFGRLL  G
Sbjct: 1   MEFRDLRSFQELKVIYKEQEERVCHHDSKVQNLVIGYLIFGRLLIFG 47

[Close]

BLAST of HG10008931 vs. ExPASy TrEMBL
Match: A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-06
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL 40
          M F+ELK KFD LK +AE QEQRVRYYETRAQNV IACL
Sbjct: 3  MRFQELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACL 41

[Close]

BLAST of HG10008931 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-06
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 137 MAVGDL-RSFEELKVINKEQETKVCYHESKVQNLVIGYLIFGRLLFSG 184
           MA+G+L R FEELK IN++QE++V Y+E+KVQN+V GYLIF RL F G
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFG 48

[Close]

BLAST of HG10008931 vs. ExPASy TrEMBL
Match: E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.7e-05
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0


Query: 1  MGFEELKGKFDELKVVAENQEQRVRYYETRAQNVAIACL 40
          M   ELK  FD LK++AE QEQRVRYYETRAQNVAIACL
Sbjct: 3  MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACL 41

The following BLAST results are available for this feature:

BLAST of HG10008931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042577.1	4.4e-11	80.85	WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598...	[more]
XP_011654634.1	4.1e-09	79.55	uncharacterized protein LOC105435426 isoform X1 [Cucumis sativus]	[more]
KAA0042578.1	2.5e-06	79.49	WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598...	[more]
XP_022157182.1	7.3e-06	64.58	uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha...	[more]
KAG7016840.1	2.1e-05	61.22	hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10008931 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLI0	2.1e-11	80.85	WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KND2	6.9e-10	76.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139800 PE=4 SV=1	[more]
A0A5D3C430	1.2e-06	79.49	WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1DSQ0	3.5e-06	64.58	uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
E5GBE1	1.7e-05	76.92	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of HG10008931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..23
None	No IPR available	PANTHER	PTHR33287:SF8	SUBFAMILY NOT NAMED	coord: 138..186
None	No IPR available	PANTHER	PTHR33287	OS03G0453550 PROTEIN	coord: 3..39 coord: 138..186
None	No IPR available	PANTHER	PTHR33287:SF8	SUBFAMILY NOT NAMED	coord: 3..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008931.1	HG10008931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane