
HG10008918 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTTAAATTTGTACATATCGTGTTGAATTTCTTTTGCTTTTGTAATTCGCCTTCGTATCGATGTATATCGTTTCTGAAATTTGTAAATTGTGTTTGATTGATTCTACCTTGTTTACCCTTCTTTGTGAAATTGTATGTCGATGATAGTTTTCCATATCCAGAATTTCGAATCTGTTGCTTTCTTAATGGATAACAACTTTTCGTTCTCTTGTTCTTATTTTCTTTTATATGTATTTAAAGAAAAATCTTGGTGTACTTAATGATGATCTCTGGCTAATAAGGGGGAAATGCTTGCTTTAGCATGTTTGAAATTGTTGTCTATTTGGACACCGTGTATTCTGTAATTCCTAAGATTAATGTATTCTTTTGTATTGTGTAGTTTCCTTTTTGAATTTGTGAATAAATAGAAATTCTTTAAGCTGTGGCTATTAAGTATTTTGGATGAATGTTTAGTGGGGTGAAAATATGAGAGCTTTTGTTGGGTTGTATTCTGTTGGATTTTCTTTGTTGTATATAAACTCCATCTTTGATTAAATAAGGGCTCATTTGATTATAATTCTGTTTTTGGTTTTCTGCTTTTGGAAATTATGTTTATTTTCTCACTATTTTTTTTACGGTTTTGAAAACTTGGAATGGTTTTTGAAAACATTGCTAACAAAATAAAGAGACTTATAGATGGAAATGGTGTTTATAAGCTTGAGTTGTCGTTTTAAAGTTTCTTTCAACGACCCCTACTCTTTGTGTTGCGGCCATAGCAGCCATTTTGAATTGGTGCATCATTCATTTATGTCTTTTGCATTCTATCTCATACTCCATAACCAAGTTCTACCATGTTTTTTATCCCTGCAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTAATTGACATTGTCTTCTCTATTTATCGCTTCCATTTTGAACAGAATAAAACAGTTAATGAGATTTTGCTATTAATTTGAGCTTTGAACAAATGGTGATGAGAAGAGGCTGTGCATGAGATGAGAATGAGATTGTTTAGAATGTTGAACTTTGGGCATGATTGTAAAATTTTCCATTTCGCCTTCAACAAGGAGAGTTCTATTGATGGTTTTAGAGCTCATCATTCTCTGAACTGATTAAGTTACCATTTTAGATACCCATAATTGTTCTTTATTCACAAATCTTTTTCTTTCTTCTTGTTGAGTTTAGGGATATCTGTGCTTTTTCTAAATTTGTGGTACCCCTTTCTTTAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTATGAATACTCTGAGAGTAGTAATGTTACATTCTCTTTCGATAAAATTTTAA ATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTATGAATACTCTGAGAGTAGTAATGTTACATTCTCTTTCGATAAAATTTTAA ATGGACTCTAGATCCCGGAGGCGGGTCCTGATCGACGACCGATCCCCGGTCGCCGGAGCTGTGGAACAACCGGACATCGCCGGAACCACCGAAGATTTGCAAGGATTGAAATTCCGACCCTCAGATGGGAATGTGACTGAAGATCAGGAACCCTTCATGGGCATCAAGGTCCGTCGAAAAGCCTCTCTTCATCGTGATTACAAGGGGGATTACATCGATGTGCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAACAGAATGTGCTTTTTGCAGATAAAGTTTTGAAGTTCACTGGTTCTGGGAAGATGAAAAGGCGGATTCTTTTAATAACAGAGTTTGCCATCTATATCATTGACCCAGAAACTGACACCCTTAAAAGGAGGATTGCCCTGGCTGCTGTAGATAAGATATGTTTAAGTGAACTAAGCGATAACTTTTTTACAATTGTAATTCCAACCGAATATGATATACTGATGGCAAGTACTCGGAAAACGGAGATTGTAACAGTTTTGGTTGAAGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGGTTGTATTCTCCAACAGGTTTGTATACAATGCAGGCGGTGAACTGATAAAAGAAGTTCAATTTGAGGAAGTCGAAGGTATGAATACTCTGAGAGTAGTAATGTTACATTCTCTTTCGATAAAATTTTAA MDSRSRRRVLIDDRSPVAGAVEQPDIAGTTEDLQGLKFRPSDGNVTEDQEPFMGIKVRRKASLHRDYKGDYIDVPSNQFLMKILQKQGEQNVLFADKVLKFTGSGKMKRRILLITEFAIYIIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFKSSSDYELEVVFSNRFVYNAGGELIKEVQFEEVEGMNTLRVVMLHSLSIKF Homology
BLAST of HG10008918 vs. NCBI nr
Match: XP_038874412.1 (myosin IB heavy chain [Benincasa hispida]) HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107 Identity = 207/221 (93.67%), Postives = 212/221 (95.93%), Query Frame = 0
BLAST of HG10008918 vs. NCBI nr
Match: XP_008437570.1 (PREDICTED: myosin IC heavy chain [Cucumis melo]) HSP 1 Score: 395.2 bits (1014), Expect = 3.9e-106 Identity = 202/221 (91.40%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. NCBI nr
Match: KAA0042567.1 (myosin IC heavy chain [Cucumis melo var. makuwa] >TYK05971.1 myosin IC heavy chain [Cucumis melo var. makuwa]) HSP 1 Score: 394.8 bits (1013), Expect = 5.0e-106 Identity = 202/221 (91.40%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. NCBI nr
Match: XP_004145919.1 (myosin IB heavy chain [Cucumis sativus] >KGN49887.1 hypothetical protein Csa_000522 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104 Identity = 199/221 (90.05%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. NCBI nr
Match: XP_023551657.1 (myosin IB heavy chain-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 193/221 (87.33%), Postives = 207/221 (93.67%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy Swiss-Prot
Match: P34092 (Myosin IB heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoB PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy Swiss-Prot
Match: P19706 (Myosin heavy chain IB OS=Acanthamoeba castellanii OX=5755 GN=MIB PE=1 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15 Identity = 54/168 (32.14%), Postives = 91/168 (54.17%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy Swiss-Prot
Match: P34109 (Myosin ID heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoD PE=1 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 3.3e-15 Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy Swiss-Prot
Match: P10569 (Myosin IC heavy chain OS=Acanthamoeba castellanii OX=5755 GN=MIC PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.8e-12 Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy Swiss-Prot
Match: E9Q634 (Unconventional myosin-Ie OS=Mus musculus OX=10090 GN=Myo1e PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11 Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy TrEMBL
Match: A0A1S3AUY9 (myosin IC heavy chain OS=Cucumis melo OX=3656 GN=LOC103482945 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 1.9e-106 Identity = 202/221 (91.40%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy TrEMBL
Match: A0A5D3C208 (Myosin IC heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00670 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106 Identity = 202/221 (91.40%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy TrEMBL
Match: A0A0A0KNB2 (TH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139650 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 6.0e-105 Identity = 199/221 (90.05%), Postives = 211/221 (95.48%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy TrEMBL
Match: A0A6J1E8M5 (myosin IB heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111430407 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.3e-101 Identity = 191/221 (86.43%), Postives = 207/221 (93.67%), Query Frame = 0
BLAST of HG10008918 vs. ExPASy TrEMBL
Match: A0A6J1I7N1 (myosin IB heavy chain-like OS=Cucurbita maxima OX=3661 GN=LOC111471561 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 9.0e-101 Identity = 192/221 (86.88%), Postives = 206/221 (93.21%), Query Frame = 0
BLAST of HG10008918 vs. TAIR 10
Match: AT5G53310.1 (myosin heavy chain-related ) HSP 1 Score: 232.3 bits (591), Expect = 4.0e-61 Identity = 112/167 (67.07%), Postives = 141/167 (84.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|