HG10008898 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008898
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CS domain-containing protein
Location	Chr06: 567968 .. 572029 (+)
RNA-Seq Expression	HG10008898
Synteny	HG10008898

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTATCTCCGAGTACGAAGAGAAGGAAGAAATCACGAAGCCAAAGAAGCCTTCCTCCTCCTCCACTTCATCATCTTCTTCATCGGCCAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAATCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAGGGATAGAGTTGAGAAGGATATCGAGACGTTAGTGCGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCGCTTGAGCTTAAAGGAAAGCCCGGGAAGAGGATTAAGGAGGAGGTGAGGAGTGTCAAGCAGGAAGCTGCACCGGAGGTGAAGGCTGTGAAGGAGGAGACGAAGACTATGGCATCACCGCCGGAAGAGAAAGCGGGGGTGAAGTTGGGGAACAACACGGAGGGGGAGAAGAAAGAGGAGAACGGACCAAGAGGTGAGCATTCCTCTTTCTCTTCCTCTACTTGTTGGTTCTTTATTTTGTCAATTTGTTATTTGGATTGGACTGGCTTTGTTGATGTTGTACCATCTGGAAGAGGTAAAGGAAGGGAAAATATTGACTAATTAAAATGATTGTCTATTCTTAAACCTCGGCCAGTCAAGTATGGCTAGATTTAACTGTTAGTTGTGCAGTCAACAGGCAAGGTTTAGCTGTTATAGTAAAGAAATTTGCGCTGGTGATGTAGCATTGGTGGCAGCAGTTCTATAATTCTTAGTTCGAACAGTCAATGGCTCTAGTTTTATAGTTAGCTAGTTGTTTACTTGGTTAGTGGGCTGTAGGTTAATCATAATAAACATTCCTTCGTAGGTTCTTCGAGATTCCCTCCTTTGATGTTTGGTTGCATCACATTCATTCAATACCCGATTCTGCTCCCAATACAAGATCATTTTTTGTCCCTATTCTTGAGGTAGTTTTAGCTTCAGTTCCTTCAGCTTAATATTTCTTGGAGTTCACATTTCGGCCTTTTCAGTTGTTCAATGCGGCTTTGAGTTCACAAGTTCACTGACTTTTAAGTTTAGAAGTGAAATATTTGGAATACTATTCTATTCTAGCCACATCACGAGTTTGAAGTTATGTCAATTTTTAGAAAGTAAGTCTTATATGTTTTCAATGTCAATTAAGTGGTACTAATTTTATTTATTTTTTATTTTTTGGAATGTGTGTGTGACATAAATCTTTTTTGTCTTGTAAGTCAACTGCTGGACTGACCCTATATTTTGTTTCTAAACTGAATGTCATCTTAACTTTGTTTCTTACTTTTAATGGCATTTGCAGTTCCCAACAAAGGTAATGGCCTTGATATGGACAACTACTCTTGGACACAGTCTCTACAAGAAGTCAATGTTAATGTACCTGTACCCAAAGGAACCAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTGTCTGCAGTATTTTGTTTGCACAGAGTGTTATTTTTATTTTCAAGTTCTAAATCATCATCACATTCTTGCAGGGAGAGCTTTGTCATATTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTCTGAAGTTTTGGTCACAAAGAAGTGTGAATAATGTTTAATTCTCTTTTAGATATGGCTTATTTTCATGAAGTCCTTGGGAGTTGATAGCATAAATAAGAAGGGAGATGCATTAAGTTAATTGAAAGCTGTTTTTTGTGTTCACTTGGGTATCAAAGTTGTTGCATTTATTATTTTCATGTTTATATTGATACTTGCTGCAGAGGATGAGAGCATCGTTTCTATTCTTTTGACCAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTGAAAGGTGATCCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACTGTTGAAAAGATGATGGTAAGTATTTTGATTGTCTATTTTCTATCTATTGCACTGCATGTATGGTTTTGTTATATTAAGGTTTTCCTCCTCTATGTATATTTGTGTGCTGTGTTTCTTATTCTTCCGCATAACAAGTTTTATTAACATGTGCACAAACATGCAAAAAGAAAAAAACACATTCTCAGTTGATGTGGGAGGGGGGATAATTCATGAAGCATTTTTCCTTGCATAAATGAAAGGTTGCAAACATTGTTTGTTCACTTCCGTTGGTTCTTATAAAACAACATAAAAATCTACAGTCACCAATCCCATTAGTAGTTTAGCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAGAAAGAAAGAAAAAAGGAAATTCAATTAAATGTAAACTACGTTGGGAGTATAGTCACAATACATGGTACTATGTCTCATAAATGTTAATTTCTTCAGAAGTACGGTGTCAAAAAGAACTTGAAGTCCTCACCAAAAAGGATACATAGCATTTTACTAAGTTCACCACCTCCTCCCAATATAAACACTTTCTTTCAAAATTCTCTGATTACTTCGTACCAAACCTCATATGATTGCCTTAATATCATTTAACCCATTGCACATTATGCCGCAGTGGCCTTCTAAATGAGCAACAAATCATCCAATAGTTCTTTAAATTCTTAGTCTCTTCCTGATCCTAAAGGAATGTGAAACCTCAAGTATGCTATGACTGAGAGCCACGGATCTAAAGTGGCTTTGTGATAGAAACCAAATATATTGAAATATATAAGATAATGATATTACTAGTAAACTACAAGTAATTTGAGGCACTTAGAACCTCTTCACTCTTGGGATTCCACCCAAGCTAGCTTAATCTTTTCCAGACTCACTTTTTATAACAAATCACGATAAGAACTTTACTGATATTCCTTTAATATCCAACAGTATCCCCACTTCTATCCTAACAGCATTACATCACTTTGCAAACTACTACTAATATGTCTAGCAGTATTTTTGAAGCACAACCATCCTCTTACCATTATCCCTAACTCTGTGTCCTAATGACATAAGGAACCAGTTTCTCCTCCATATCTCCTACACCTTTTAAGCTATAGTCGTAGCCTTGATGTTGTTTATACCAAGTCCCTCTTGAAAGTTGAAATGTAGGCAATGCACTTTTTCCAACTCACTAAATGATCACGACTCCATATCAAGGCCCTTCCTCAATATATTCCTCGAGACTTTCTCAATGGGTGAGCCTGCCCTGATTGTTAGATATATTGGGAAAGGATGGGTCGTGTGAGAGTCAATCTTCCCCCAAAGAGGGAAGGGGGTTTTTTGTTTTTTCAATATATATATATATACATAAAAAAAATTCCTTCTCTAAAAATATATACATAAAAAAAATTCTTGGACAGCTCCTAGACACCCTTATCAATCAGAGGAAGCCGTGACTCAACTATCAAATACTGTTAAATTCCGGAGAGAATGATATTGATATTGTCTTAGGAATGTTTTGACATTATGATGAAGAGGTTGAAATTCTCTCAATTTTAACTATGCTCCACATCAACGTTGGAGTTAATCTCCCTCATCAATTCATGTTTGCGAAGGAAAATTATAATGTATGATTGGTCTATCAATCACTTTAAACTTACGGTGTTCTTGGCATCTGCAACTCCCAATAAATCTAGACTCGTGCCTGATTATGCTCTCTGATCTCGTCATTCAATGAGTTTTTAAAGTTGTTCTTTGGTGGCACATCCTTATGCATTGGCCATTGGTTGATGGGTGCGGTCACAGCTGCTGCTATATGATGATATCTAAATATATTTTATAATAAATTGACGATCAATTCATTTTCCTTGATTGATTTGGAAATTTTTTTACAGTTTGATCAAAGGCAGAAATCTATGGGACTCCCAACCAGTGATGAGATGCAGAAACAAGAGATTCTGAAGAAGTTCATGTCTGAGGTGATTATTTAGAGCTGTGTTTGTGTTTGTTTTTGGTTTATAATATCCTATTGATTCTCTCTACTGAACCTCTGAAATTGGTCCCATGCAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAA

mRNA sequence

ATGGCGATTATCTCCGAGTACGAAGAGAAGGAAGAAATCACGAAGCCAAAGAAGCCTTCCTCCTCCTCCACTTCATCATCTTCTTCATCGGCCAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAATCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAGGGATAGAGTTGAGAAGGATATCGAGACGTTAGTGCGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCGCTTGAGCTTAAAGGAAAGCCCGGGAAGAGGATTAAGGAGGAGGTGAGGAGTGTCAAGCAGGAAGCTGCACCGGAGGTGAAGGCTGTGAAGGAGGAGACGAAGACTATGGCATCACCGCCGGAAGAGAAAGCGGGGGTGAAGTTGGGGAACAACACGGAGGGGGAGAAGAAAGAGGAGAACGGACCAAGAGTTCCCAACAAAGGTAATGGCCTTGATATGGACAACTACTCTTGGACACAGTCTCTACAAGAAGTCAATGTTAATGTACCTGTACCCAAAGGAACCAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTGTCATATTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCGTTTCTATTCTTTTGACCAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTGAAAGGTGATCCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACTGTTGAAAAGATGATGTTTGATCAAAGGCAGAAATCTATGGGACTCCCAACCAGTGATGAGATGCAGAAACAAGAGATTCTGAAGAAGTTCATGTCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAA

Coding sequence (CDS)

ATGGCGATTATCTCCGAGTACGAAGAGAAGGAAGAAATCACGAAGCCAAAGAAGCCTTCCTCCTCCTCCACTTCATCATCTTCTTCATCGGCCAAGCCTTCTCAGTTCAATGCCAACTTTGACCCTTCAAATCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAGGGATAGAGTTGAGAAGGATATCGAGACGTTAGTGCGCAGAGCTGTGGAGAAGAGAAAGAAGCATGAGGAGTCGCTTGAGCTTAAAGGAAAGCCCGGGAAGAGGATTAAGGAGGAGGTGAGGAGTGTCAAGCAGGAAGCTGCACCGGAGGTGAAGGCTGTGAAGGAGGAGACGAAGACTATGGCATCACCGCCGGAAGAGAAAGCGGGGGTGAAGTTGGGGAACAACACGGAGGGGGAGAAGAAAGAGGAGAACGGACCAAGAGTTCCCAACAAAGGTAATGGCCTTGATATGGACAACTACTCTTGGACACAGTCTCTACAAGAAGTCAATGTTAATGTACCTGTACCCAAAGGAACCAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGGAGAGCTTTGTCATATTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCGTTTCTATTCTTTTGACCAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTGAAAGGTGATCCTGAGATTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACTATCTGATTTAGATCCAGAAACACGACAAACTGTTGAAAAGATGATGTTTGATCAAAGGCAGAAATCTATGGGACTCCCAACCAGTGATGAGATGCAGAAACAAGAGATTCTGAAGAAGTTCATGTCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAA

Protein sequence

MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANETDFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKEETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS

Homology

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BLAST of HG10008898 vs. NCBI nr
Match: XP_038874468.1 (protein BOBBER 1 [Benincasa hispida])

HSP 1 Score: 550.4 bits (1417), Expect = 1.0e-152
Identity = 289/322 (89.75%), Postives = 297/322 (92.24%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISEYEEKEEI+KPKKPSSSS+ SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISEYEEKEEISKPKKPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLSRDRVEKDIET+VRRAVEKRKKHEES ELKGK  KRIKEEVRS+KQ           
Sbjct: 61  DFLSRDRVEKDIETVVRRAVEKRKKHEESFELKGKAEKRIKEEVRSIKQ----------- 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
           E K +ASPPEEK  VKL  NTE EKKE NGPR PN+GNGLDMDNYSWTQSLQEVNVNVPV
Sbjct: 121 EVKAVASPPEEKLDVKLEENTEEEKKEANGPRAPNRGNGLDMDNYSWTQSLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTK+RFVVCEIKKN LKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESI+SILLTKHN
Sbjct: 181 PKGTKARFVVCEIKKNRLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QEILKKFMSEHPEMDFSRAKIS 311

[Close]

BLAST of HG10008898 vs. NCBI nr
Match: XP_008437594.1 (PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucumis melo var. makuwa] >TYK05956.1 protein BOBBER 1 [Cucumis melo var. makuwa])

HSP 1 Score: 549.7 bits (1415), Expect = 1.7e-152
Identity = 291/322 (90.37%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI KPK+PSSSS+ SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLS DRVEKDIET+VRRAVEKRKKHEESLELKGK  KRIKEEV+SVKQEAAP       
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAP------- 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
             K +ASPPEEK G KL   TE EKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV
Sbjct: 121 -AKAVASPPEEKVGEKLEEVTE-EKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKN LKVGLKGQPPVIDGELCH VKPDDCYWSIEDESI+SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QEILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of HG10008898 vs. NCBI nr
Match: XP_011654620.1 (protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 6.1e-150
Identity = 290/324 (89.51%), Postives = 298/324 (91.98%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTS--SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEI KPKKPSSSS+S  SSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAV 120
           ETDFLS+DRVEKDIET+VRRAVEKRKKH+ESLELKGK  KRIKEEV+SVK+EAAP     
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAP----- 120

Query: 121 KEETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNV 180
               K  ASPPEEK G KL  NTE EKKEENG RVPNKGNGLDMDNYSWTQSLQEVNVNV
Sbjct: 121 ---VKAAASPPEEKVGEKLEENTE-EKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNV 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTK 240
           PVPKGTKSRFVVCEIKKN LKVGLKGQPPVID ELCH VKPDDCYWSIEDESIVSILLTK
Sbjct: 181 PVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTK 240

Query: 241 HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
           HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM
Sbjct: 241 HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300

Query: 301 QKQEILKKFMSEHPEMDFSRAKIS 323
           QKQEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QKQEILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of HG10008898 vs. NCBI nr
Match: KAG6579322.1 (Protein BOBBER 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016823.1 Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 539.7 bits (1389), Expect = 1.8e-149
Identity = 284/322 (88.20%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI+KPK+P SSS+ SSSSSAKPSQFNA+FDPSNPLGFLEKVFDFLA E+
Sbjct: 1   MAIISDYEEKEEISKPKRPFSSSSPSSSSSAKPSQFNADFDPSNPLGFLEKVFDFLAKES 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLSRDR EK+IET+VRRAVEKRKKHEESLE KGK  KRIKEEVRSVKQ    EVKAVKE
Sbjct: 61  DFLSRDRAEKEIETVVRRAVEKRKKHEESLEHKGKAEKRIKEEVRSVKQ----EVKAVKE 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
           E KT+ASPPEEK GVKL  N+     EENGPRVPNKGNGLDMDNYSWTQ+LQEVNVNVPV
Sbjct: 121 EPKTVASPPEEKVGVKLEGNS-----EENGPRVPNKGNGLDMDNYSWTQTLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELC IVKPDDCYWSIED+S +SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCQIVKPDDCYWSIEDQSTISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFM+EHPEMDFSRAK+S
Sbjct: 301 QEILKKFMAEHPEMDFSRAKLS 313

[Close]

BLAST of HG10008898 vs. NCBI nr
Match: XP_022922435.1 (protein BOBBER 1-like [Cucurbita moschata])

HSP 1 Score: 538.5 bits (1386), Expect = 3.9e-149
Identity = 283/322 (87.89%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI+KPK+P SSS+ SSSSSAKPSQFNA+FDPSNPLGFLEKVFDFLA E+
Sbjct: 1   MAIISDYEEKEEISKPKRPFSSSSPSSSSSAKPSQFNADFDPSNPLGFLEKVFDFLAKES 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLSRDR EK+IET+VRRAVEKRKKHEESLE KGK  KRIKEEVRSVKQ    EVKAVKE
Sbjct: 61  DFLSRDRAEKEIETVVRRAVEKRKKHEESLEHKGKAEKRIKEEVRSVKQ----EVKAVKE 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
           E KT+ASPPEEK G+KL  N+     EENGPRVPNKGNGLDMDNYSWTQ+LQEVNVNVPV
Sbjct: 121 EPKTVASPPEEKVGMKLEGNS-----EENGPRVPNKGNGLDMDNYSWTQTLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELC IVKPDDCYWSIED+S +SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCQIVKPDDCYWSIEDQSTISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFM+EHPEMDFSRAK+S
Sbjct: 301 QEILKKFMAEHPEMDFSRAKLS 313

[Close]

BLAST of HG10008898 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-91
Identity = 194/329 (58.97%), Postives = 230/329 (69.91%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISE EE+               SSSS      F A    +NPLGFLEKVFDFL  ++
Sbjct: 1   MAIISEVEEE---------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEV----- 120
           DFL +   E +I   VR A EK KK E+         K  KE V+ V+++A  E+     
Sbjct: 61  DFLKKPSAEDEIVVAVRAAKEKLKKAEKK--------KAEKESVKPVEKKAEKEIVKLVE 120

Query: 121 -KAVKEETK-TMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQE 180
            K  KE  K T+A+   E   +++    E E+K+E+GP VPNKGNG D++NYSW Q+LQE
Sbjct: 121 KKVEKESVKPTIAASSAEP--IEVEKPKEEEEKKESGPIVPNKGNGTDLENYSWIQNLQE 180

Query: 181 VNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVS 240
           V VN+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGEL   VKPDDCYW+IED+ ++S
Sbjct: 181 VTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVIS 240

Query: 241 ILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300
           ILLTK +QMEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLP
Sbjct: 241 ILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLP 300

Query: 301 TSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
           TS+E+QKQEILKKFMSEHPEMDFS AK +
Sbjct: 301 TSEELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of HG10008898 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 161/299 (53.85%), Postives = 214/299 (71.57%), Query Frame = 0


Query: 26  SSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFLANETDFLSRDRVEKDIETLVRRAVEKR 85
           S    A+PS   F A+FDPSNP+ FLEKV D +  E++FL +D  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKEETKTMASPPEEKAGVKLGNNTEG 145
            +  E  +L+ +  K ++ E          E++  KEE+     P E +         + 
Sbjct: 65  LREAEKKKLEKESVKSMEVEKPKKDSLKPTELEKPKEESLMATDPMEIE---------KP 124

Query: 146 EKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLK 205
           ++++E+GP VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKN LKVGLK
Sbjct: 125 KEEKESGPIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLK 184

Query: 206 GQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPE 265
           GQ  ++DGE  + VKPDDC+W+IED+ ++S+LLTK +QMEWWKY VKG+PEIDTQKVEPE
Sbjct: 185 GQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPE 244

Query: 266 NSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
            SKL DLDPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 TSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of HG10008898 vs. ExPASy Swiss-Prot
Match: O35685 (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-54
Identity = 125/261 (47.89%), Postives = 168/261 (64.37%), Query Frame = 0


Query: 73  ETLVRRAVEKRKKHEESLELKGK-----PGKRIK----EEVRSVKQEAAPEVKAVKEETK 132
           E   R+  E+R+K E +  L  +     PG +IK    EE   ++ E   +  A  +E +
Sbjct: 72  EKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQ 131

Query: 133 TMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVP--VP 192
                 +        +  + E +++ G   PN GNG D+ NY WTQ+L E+++ VP  V 
Sbjct: 132 LKNGSLDSPGKQDAEDEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVS 191

Query: 193 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHNQ 252
              K + VV +I++ HL+VGLKGQPPV+DGEL + VK ++  W IED  +V++ L K N+
Sbjct: 192 FRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINK 251

Query: 253 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 312
           MEWW  LV  DPEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ
Sbjct: 252 MEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQ 311

Query: 313 EILKKFMSEHPEMDFSRAKIS 323
           EILKKFM +HPEMDFS+AK +
Sbjct: 312 EILKKFMDQHPEMDFSKAKFN 332

[Close]

BLAST of HG10008898 vs. ExPASy Swiss-Prot
Match: Q63525 (Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.9e-53
Identity = 125/261 (47.89%), Postives = 165/261 (63.22%), Query Frame = 0


Query: 73  ETLVRRAVEKRKKHEESLELKGK-----PGKRIK----EEVRSVKQEAAPEVKAVKEETK 132
           E   R+  E+R+K E +  L  +     PG +IK    EE   ++ E   +  A   E +
Sbjct: 72  EKRARQETERREKAERAARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAENHEVQ 131

Query: 133 TMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVP--VP 192
                 +           + E +++ G   PN GNG D+ NY WTQ+L E+++ VP  V 
Sbjct: 132 LKNGSLDSPGKQDAEEEEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFRVS 191

Query: 193 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHNQ 252
              K + VV +I++ HL+VGLKGQ PVIDGEL + VK ++  W IED  +V++ L K N+
Sbjct: 192 FRLKGKDVVVDIQRRHLRVGLKGQAPVIDGELYNEVKVEESSWLIEDGKVVTVHLEKINK 251

Query: 253 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 312
           MEWW  LV  DPEI+T+K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQ
Sbjct: 252 MEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQ 311

Query: 313 EILKKFMSEHPEMDFSRAKIS 323
           EILKKFM +HPEMDFS+AK +
Sbjct: 312 EILKKFMDQHPEMDFSKAKFN 332

[Close]

BLAST of HG10008898 vs. ExPASy Swiss-Prot
Match: Q5ZIN1 (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.5e-53
Identity = 135/292 (46.23%), Postives = 180/292 (61.64%), Query Frame = 0


Query: 47  GFLEK-VFDFLANETDFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGK-----RI 106
           G  EK + D   +      ++R EK      R+  E+R+K E + +L  +  +     RI
Sbjct: 54  GVAEKLITDSFNHHNKLAQKERKEKK----ARQEAERREKAERAAKLAKEAKQEANEPRI 113

Query: 107 KEEVRSVKQEAAPEVKAVKEETKTMASPP---EEKAGVKLGNN---TEGEKKEEN--GPR 166
           KE      +    E+   KE  K + + P    E  G    +N   T+ E+K+EN  G  
Sbjct: 114 KELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNKQETDDEEKDENDKGKL 173

Query: 167 VPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVID 226
            PN GNG D+ NY WTQ+L E+++ +P  V    K + VV +I++  L+VGLKG PPVID
Sbjct: 174 KPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVID 233

Query: 227 GELCHIVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 286
           GEL + VK ++  W IED   V++ L K N+MEWW  LV  DPEI+T+K+ PENSKLSDL
Sbjct: 234 GELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDL 293

Query: 287 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
           D ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM +HPEMDFS+AK +
Sbjct: 294 DSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341

[Close]

BLAST of HG10008898 vs. ExPASy TrEMBL
Match: A0A5A7TGM4 (Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.3e-153
Identity = 291/322 (90.37%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI KPK+PSSSS+ SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLS DRVEKDIET+VRRAVEKRKKHEESLELKGK  KRIKEEV+SVKQEAAP       
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAP------- 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
             K +ASPPEEK G KL   TE EKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV
Sbjct: 121 -AKAVASPPEEKVGEKLEEVTE-EKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKN LKVGLKGQPPVIDGELCH VKPDDCYWSIEDESI+SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QEILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of HG10008898 vs. ExPASy TrEMBL
Match: A0A1S3AUE5 (protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 8.3e-153
Identity = 291/322 (90.37%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI KPK+PSSSS+ SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET
Sbjct: 1   MAIISDYEEKEEIPKPKRPSSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLS DRVEKDIET+VRRAVEKRKKHEESLELKGK  KRIKEEV+SVKQEAAP       
Sbjct: 61  DFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAP------- 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
             K +ASPPEEK G KL   TE EKKE+NGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV
Sbjct: 121 -AKAVASPPEEKVGEKLEEVTE-EKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKN LKVGLKGQPPVIDGELCH VKPDDCYWSIEDESI+SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QEILKKFMSEHPEMDFSRAKIS 313

[Close]

BLAST of HG10008898 vs. ExPASy TrEMBL
Match: A0A0A0KQ62 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.9e-150
Identity = 290/324 (89.51%), Postives = 298/324 (91.98%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTS--SSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEI KPKKPSSSS+S  SSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAV 120
           ETDFLS+DRVEKDIET+VRRAVEKRKKH+ESLELKGK  KRIKEEV+SVK+EAAP     
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAP----- 120

Query: 121 KEETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNV 180
               K  ASPPEEK G KL  NTE EKKEENG RVPNKGNGLDMDNYSWTQSLQEVNVNV
Sbjct: 121 ---VKAAASPPEEKVGEKLEENTE-EKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNV 180

Query: 181 PVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTK 240
           PVPKGTKSRFVVCEIKKN LKVGLKGQPPVID ELCH VKPDDCYWSIEDESIVSILLTK
Sbjct: 181 PVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTK 240

Query: 241 HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300
           HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM
Sbjct: 241 HNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEM 300

Query: 301 QKQEILKKFMSEHPEMDFSRAKIS 323
           QKQEILKKFMSEHPEMDFSRAKIS
Sbjct: 301 QKQEILKKFMSEHPEMDFSRAKIS 315

[Close]

BLAST of HG10008898 vs. ExPASy TrEMBL
Match: A0A6J1E8R0 (protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430428 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.9e-149
Identity = 283/322 (87.89%), Postives = 300/322 (93.17%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI+KPK+P SSS+ SSSSSAKPSQFNA+FDPSNPLGFLEKVFDFLA E+
Sbjct: 1   MAIISDYEEKEEISKPKRPFSSSSPSSSSSAKPSQFNADFDPSNPLGFLEKVFDFLAKES 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLSRDR EK+IET+VRRAVEKRKKHEESLE KGK  KRIKEEVRSVKQ    EVKAVKE
Sbjct: 61  DFLSRDRAEKEIETVVRRAVEKRKKHEESLEHKGKAEKRIKEEVRSVKQ----EVKAVKE 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
           E KT+ASPPEEK G+KL  N+     EENGPRVPNKGNGLDMDNYSWTQ+LQEVNVNVPV
Sbjct: 121 EPKTVASPPEEKVGMKLEGNS-----EENGPRVPNKGNGLDMDNYSWTQTLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELC IVKPDDCYWSIED+S +SILLTKHN
Sbjct: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCQIVKPDDCYWSIEDQSTISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFM+EHPEMDFSRAK+S
Sbjct: 301 QEILKKFMAEHPEMDFSRAKLS 313

[Close]

BLAST of HG10008898 vs. ExPASy TrEMBL
Match: A0A6J1I7M3 (protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471555 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 6.1e-148
Identity = 280/322 (86.96%), Postives = 299/322 (92.86%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIIS+YEEKEEI+KPK+P SSS+ SSSSSAKPSQFNA+FDPSNPLG LEKVFDFLANE+
Sbjct: 1   MAIISDYEEKEEISKPKRPFSSSSPSSSSSAKPSQFNADFDPSNPLGLLEKVFDFLANES 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKE 120
           DFLSRDR EK+IE +VRRAVEKRKKHEESLE KGK  KRIKEEVRSVKQ    EVKAVKE
Sbjct: 61  DFLSRDRAEKEIEMVVRRAVEKRKKHEESLEHKGKAEKRIKEEVRSVKQ----EVKAVKE 120

Query: 121 ETKTMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPV 180
           ETKT+ASPPEEK GV L  N+     +ENGPRVPNKGNGLDMDNYSWTQ+LQEVNVNVPV
Sbjct: 121 ETKTVASPPEEKVGVMLEGNS-----KENGPRVPNKGNGLDMDNYSWTQTLQEVNVNVPV 180

Query: 181 PKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHN 240
           PKGTKS+FVVCEIKKNHLKVGLKGQPPVIDGELC IVKPDDCYWSIED+S +SILLTKHN
Sbjct: 181 PKGTKSKFVVCEIKKNHLKVGLKGQPPVIDGELCQIVKPDDCYWSIEDQSTISILLTKHN 240

Query: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQK 300
           QMEWWKYLVKGDPEIDTQKVEPENSKL+DLDPETRQTVEKMMFDQRQKS+GLPTSDEMQK
Sbjct: 241 QMEWWKYLVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSLGLPTSDEMQK 300

Query: 301 QEILKKFMSEHPEMDFSRAKIS 323
           QEILKKFM+EHPEMDFSRAK+S
Sbjct: 301 QEILKKFMAEHPEMDFSRAKLS 313

[Close]

BLAST of HG10008898 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 337.8 bits (865), Expect = 9.5e-93
Identity = 194/329 (58.97%), Postives = 230/329 (69.91%), Query Frame = 0


Query: 1   MAIISEYEEKEEITKPKKPSSSSTSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLANET 60
           MAIISE EE+               SSSS      F A    +NPLGFLEKVFDFL  ++
Sbjct: 1   MAIISEVEEE---------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGEQS 60

Query: 61  DFLSRDRVEKDIETLVRRAVEKRKKHEESLELKGKPGKRIKEEVRSVKQEAAPEV----- 120
           DFL +   E +I   VR A EK KK E+         K  KE V+ V+++A  E+     
Sbjct: 61  DFLKKPSAEDEIVVAVRAAKEKLKKAEKK--------KAEKESVKPVEKKAEKEIVKLVE 120

Query: 121 -KAVKEETK-TMASPPEEKAGVKLGNNTEGEKKEENGPRVPNKGNGLDMDNYSWTQSLQE 180
            K  KE  K T+A+   E   +++    E E+K+E+GP VPNKGNG D++NYSW Q+LQE
Sbjct: 121 KKVEKESVKPTIAASSAEP--IEVEKPKEEEEKKESGPIVPNKGNGTDLENYSWIQNLQE 180

Query: 181 VNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIVS 240
           V VN+PVP GTK+R VVCEIKKN LKVGLKGQ P++DGEL   VKPDDCYW+IED+ ++S
Sbjct: 181 VTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVIS 240

Query: 241 ILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLP 300
           ILLTK +QMEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLP
Sbjct: 241 ILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLP 300

Query: 301 TSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
           TS+E+QKQEILKKFMSEHPEMDFS AK +
Sbjct: 301 TSEELQKQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of HG10008898 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 9.9e-82
Identity = 161/299 (53.85%), Postives = 214/299 (71.57%), Query Frame = 0


Query: 26  SSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFLANETDFLSRDRVEKDIETLVRRAVEKR 85
           S    A+PS   F A+FDPSNP+ FLEKV D +  E++FL +D  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHEESLELKGKPGKRIKEEVRSVKQEAAPEVKAVKEETKTMASPPEEKAGVKLGNNTEG 145
            +  E  +L+ +  K ++ E          E++  KEE+     P E +         + 
Sbjct: 65  LREAEKKKLEKESVKSMEVEKPKKDSLKPTELEKPKEESLMATDPMEIE---------KP 124

Query: 146 EKKEENGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLK 205
           ++++E+GP VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKN LKVGLK
Sbjct: 125 KEEKESGPIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLK 184

Query: 206 GQPPVIDGELCHIVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPE 265
           GQ  ++DGE  + VKPDDC+W+IED+ ++S+LLTK +QMEWWKY VKG+PEIDTQKVEPE
Sbjct: 185 GQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPE 244

Query: 266 NSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
            SKL DLDPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 TSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of HG10008898 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13
Identity = 42/158 (26.58%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 165 YSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELCHIVKPDDCYW 224
           + W Q+L+EVN+ + +P     +   C+I+  H++VG+KG PP ++ +L   VK D  +W
Sbjct: 21  FEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFW 80

Query: 225 SIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFD 284
           ++ED+ I+ I L K  + + W   + G  ++D    + E                     
Sbjct: 81  TLEDD-IMHITLQKREKGQTWASPILGQGQLDPYATDLE--------------------- 140

Query: 285 QRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 323
                         QK+ +L++F  E+P  DFS+A+ S
Sbjct: 141 --------------QKRLMLQRFQEENPGFDFSQAQFS 142

[Close]

BLAST of HG10008898 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 36 FNANFDPSNPLGFLEKVFDFLANETDFLSRDRVEKDIETLVRRAVEKRKKHEESLE 92
          F+A+F+PSNPLGFLE V DF+  E++FL +D  EK+I   V  A E+ ++ E+  E
Sbjct: 11 FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKERLRETEKKTE 66

The following BLAST results are available for this feature:

BLAST of HG10008898 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874468.1	1.0e-152	89.75	protein BOBBER 1 [Benincasa hispida]	[more]
XP_008437594.1	1.7e-152	90.37	PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucum...	[more]
XP_011654620.1	6.1e-150	89.51	protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [...	[more]
KAG6579322.1	1.8e-149	88.20	Protein BOBBER 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016823.1 ...	[more]
XP_022922435.1	3.9e-149	87.89	protein BOBBER 1-like [Cucurbita moschata]	[more]

BLAST of HG10008898 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV09	1.3e-91	58.97	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]
Q9STN7	1.4e-80	53.85	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
O35685	2.2e-54	47.89	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1	[more]
Q63525	1.9e-53	47.89	Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1	[more]
Q5ZIN1	2.5e-53	46.23	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1	[more]

BLAST of HG10008898 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGM4	8.3e-153	90.37	Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G004...	[more]
A0A1S3AUE5	8.3e-153	90.37	protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1	[more]
A0A0A0KQ62	2.9e-150	89.51	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=...	[more]
A0A6J1E8R0	1.9e-149	87.89	protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430428 PE=4 SV=1	[more]
A0A6J1I7M3	6.1e-148	86.96	protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471555 PE=4 SV=1	[more]

BLAST of HG10008898 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53400.1	9.5e-93	58.97	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	9.9e-82	53.85	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	2.6e-13	26.58	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	2.1e-07	48.21	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 25..322
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 165..249 e-value: 1.00776E-38 score: 130.36
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 156..283 e-value: 9.3E-47 score: 160.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 150..264
IPR007052	CS domain	PFAM	PF04969	CS	coord: 164..238 e-value: 9.9E-21 score: 74.6
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 160..249 score: 17.542849
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 25..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008898.1	HG10008898.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051082	unfolded protein binding