HG10008895 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008895
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pectinesterase
Location	Chr06: 548614 .. 549051 (-)
RNA-Seq Expression	HG10008895
Synteny	HG10008895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGGGCAAAAGAACACCATCACAGCCCAAGACCGGAAGGACCCAAACCAAAATACCGGAATTTCCATCCATGCTTGCAAGATCGTTGCCACCGACGACCTTGAAGCCTCCAAGGGTTCTTTCCCTACATTCCTCGGCCGTCCTTGGAAATTATACTCTAGAGTCGTCTACATGGTATCTTCCATGGGCGACCATATTCACCCACGTGGCTGGCTCGAGTGGCAAGGCTCTTTTGCTCTCGACACTCTTTACTATGGCGAGTATATGAATTCTGGGCCGGGCGCCGCCGTGGGGCAGCGGGTCAAGTGGCCGGGTTATCGGGTCATAACTTCCACGGTGGAAGCCTCCAAATTTACCGTTGGACAATTTATTTATGGCTCTTCTTGGTTGCCTTCTACTGGAGTTTCGTTTTCAGCTGGATTATCCGCTAACTAA

mRNA sequence

ATGCCGGGGCAAAAGAACACCATCACAGCCCAAGACCGGAAGGACCCAAACCAAAATACCGGAATTTCCATCCATGCTTGCAAGATCGTTGCCACCGACGACCTTGAAGCCTCCAAGGGTTCTTTCCCTACATTCCTCGGCCGTCCTTGGAAATTATACTCTAGAGTCGTCTACATGGTATCTTCCATGGGCGACCATATTCACCCACGTGGCTGGCTCGAGTGGCAAGGCTCTTTTGCTCTCGACACTCTTTACTATGGCGAGTATATGAATTCTGGGCCGGGCGCCGCCGTGGGGCAGCGGGTCAAGTGGCCGGGTTATCGGGTCATAACTTCCACGGTGGAAGCCTCCAAATTTACCGTTGGACAATTTATTTATGGCTCTTCTTGGTTGCCTTCTACTGGAGTTTCGTTTTCAGCTGGATTATCCGCTAACTAA

Coding sequence (CDS)

ATGCCGGGGCAAAAGAACACCATCACAGCCCAAGACCGGAAGGACCCAAACCAAAATACCGGAATTTCCATCCATGCTTGCAAGATCGTTGCCACCGACGACCTTGAAGCCTCCAAGGGTTCTTTCCCTACATTCCTCGGCCGTCCTTGGAAATTATACTCTAGAGTCGTCTACATGGTATCTTCCATGGGCGACCATATTCACCCACGTGGCTGGCTCGAGTGGCAAGGCTCTTTTGCTCTCGACACTCTTTACTATGGCGAGTATATGAATTCTGGGCCGGGCGCCGCCGTGGGGCAGCGGGTCAAGTGGCCGGGTTATCGGGTCATAACTTCCACGGTGGAAGCCTCCAAATTTACCGTTGGACAATTTATTTATGGCTCTTCTTGGTTGCCTTCTACTGGAGTTTCGTTTTCAGCTGGATTATCCGCTAACTAA

Protein sequence

MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVGQFIYGSSWLPSTGVSFSAGLSAN

Homology

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BLAST of HG10008895 vs. NCBI nr
Match: XP_011654619.1 (probable pectinesterase/pectinesterase inhibitor 61 [Cucumis sativus] >KGN49865.1 hypothetical protein Csa_000423 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 8.1e-78
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 460 MAGQKNTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 519

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 520 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 579

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 580 VGQFIYGSSWLPSTGVSFSAGLSTN 604

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BLAST of HG10008895 vs. NCBI nr
Match: KAA0042550.1 (putative pectinesterase/pectinesterase inhibitor 61 [Cucumis melo var. makuwa] >TYK05954.1 putative pectinesterase/pectinesterase inhibitor 61 [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 2.4e-77
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 78  MAGQKNTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 137

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHP+GWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 138 SSMGDHIHPQGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 197

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 198 VGQFIYGSSWLPSTGVSFSAGLSTN 222

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BLAST of HG10008895 vs. NCBI nr
Match: XP_008437596.1 (PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 61 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 5.3e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQK TITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 461 MAGQKXTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 520

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 521 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 580

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 581 VGQFIYGSSWLPSTGVSFSAGLSTN 605

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BLAST of HG10008895 vs. NCBI nr
Match: KAG6579321.1 (putative pectinesterase/pectinesterase inhibitor 61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 6.9e-77
Identity = 138/145 (95.17%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKI+AT DLEASKGSFPT+LGRPWKLYSRVVYMV
Sbjct: 458 MSGQKNTITAQDRKDPNQNTGISIHACKIIATGDLEASKGSFPTYLGRPWKLYSRVVYMV 517

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITST+EA+KFT
Sbjct: 518 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTIEATKFT 577

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 578 VGQFIYGSSWLPSTGVSFSAGLSTN 602

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BLAST of HG10008895 vs. NCBI nr
Match: XP_038874841.1 (probable pectinesterase/pectinesterase inhibitor 61 [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 1.5e-76
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           MPGQKNTITAQDRKDPNQNTGISIHACKI+AT DL+ASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 460 MPGQKNTITAQDRKDPNQNTGISIHACKIIATSDLQASKGSFPTFLGRPWKLYSRVVYMV 519

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           S MGDHIHPRGWLEWQGSFALDTLYYGEY NSGPGAAVGQRVKW GYRVITSTVEASKFT
Sbjct: 520 SFMGDHIHPRGWLEWQGSFALDTLYYGEYSNSGPGAAVGQRVKWSGYRVITSTVEASKFT 579

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLSAN
Sbjct: 580 VGQFIYGSSWLPSTGVSFSAGLSAN 604

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BLAST of HG10008895 vs. ExPASy Swiss-Prot
Match: Q9FK05 (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana OX=3702 GN=PME61 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 8.8e-67
Identity = 118/143 (82.52%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M  QK TITAQ+RKDPNQNTGISIHACK++AT DLEASKGS+PT+LGRPWKLYSRVVYM+
Sbjct: 444 MAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMM 503

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           S MGDHI PRGWLEW G FALD+LYYGEYMN G G+ +GQRVKWPGY VITSTVEASKFT
Sbjct: 504 SDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFT 563

Query: 121 VGQFIYGSSWLPSTGVSFSAGLS 144
           V QFI GSSWLPSTGVSF +GLS
Sbjct: 564 VAQFISGSSWLPSTGVSFFSGLS 586

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BLAST of HG10008895 vs. ExPASy Swiss-Prot
Match: Q9M3B0 (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana OX=3702 GN=PME34 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.4e-61
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M  QKNTITAQ+RKDPNQNTGISIHA +++A  DL+A+ GS  T+LGRPWKL+SR VYM+
Sbjct: 455 MDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMM 514

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           S +G H+H RGWLEW  +FALDTLYYGEY+NSGPG+ +GQRV WPGYRVI ST EA++FT
Sbjct: 515 SYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFT 574

Query: 121 VGQFIYGSSWLPSTGVSFSAGLS 144
           V +FIYGSSWLPSTGVSF AGLS
Sbjct: 575 VAEFIYGSSWLPSTGVSFLAGLS 597

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BLAST of HG10008895 vs. ExPASy Swiss-Prot
Match: Q9LXK7 (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3702 GN=PME32 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.4e-48
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           +P QKN+ITAQ RKDPN+ TG +I    I A  DL  +  +  T+LGRPWKLYSR V+M 
Sbjct: 384 LPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQ 443

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           + M D I+P GWLEW G+FALDTLYYGEYMNSGPGA++ +RVKWPGY V+ ++ EA+ FT
Sbjct: 444 NYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFT 503

Query: 121 VGQFIYGSSWLPSTGVSFSAGL 143
           V Q I G+ WLPSTG++F AGL
Sbjct: 504 VSQLIQGNLWLPSTGITFIAGL 525

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BLAST of HG10008895 vs. ExPASy Swiss-Prot
Match: Q43062 (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.0e-48
Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLE-ASKGSFPTFLGRPWKLYSRVVYM 60
           +P QKN+ITAQ RKDPN+ TGISI  C I A  DLE AS  S PT+LGRPWKLYSR V M
Sbjct: 378 LPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIM 437

Query: 61  VSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKF 120
            S + + I P GWLEW G FAL++L+YGEYMN GPGA +G RVKWPGY+V   + +A  +
Sbjct: 438 QSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNY 497

Query: 121 TVGQFIYGSSWLPSTGVSFSA 141
           TV QFI G+ WLPSTGV ++A
Sbjct: 498 TVAQFIEGNLWLPSTGVKYTA 518

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BLAST of HG10008895 vs. ExPASy Swiss-Prot
Match: O04886 (Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-47
Identity = 91/140 (65.00%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 3   GQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMVSS 62
           GQKN +TAQ R DPNQNTGI I   +I AT DL+  +GSFPT+LGRPWK YSR V M SS
Sbjct: 445 GQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSS 504

Query: 63  MGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVG 122
           + D IHP GW EW G+FAL+TL+YGE+ NSG GA    RVKW G+RVITS  EA  FT G
Sbjct: 505 ITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPG 564

Query: 123 QFIYGSSWLPSTGVSFSAGL 143
            FI GSSWL STG  FS GL
Sbjct: 565 SFIAGSSWLGSTGFPFSLGL 584

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BLAST of HG10008895 vs. ExPASy TrEMBL
Match: A0A0A0KJG1 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G139430 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.9e-78
Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 460 MAGQKNTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 519

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 520 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 579

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 580 VGQFIYGSSWLPSTGVSFSAGLSTN 604

[Close]

BLAST of HG10008895 vs. ExPASy TrEMBL
Match: A0A5D3C3S5 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00470 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.1e-77
Identity = 141/145 (97.24%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 78  MAGQKNTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 137

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHP+GWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 138 SSMGDHIHPQGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 197

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 198 VGQFIYGSSWLPSTGVSFSAGLSTN 222

[Close]

BLAST of HG10008895 vs. ExPASy TrEMBL
Match: A0A1S3AUZ6 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103482964 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.6e-77
Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQK TITAQDRKDPNQNTGISIHACKIVAT DLEASKGSFPTFLGRPWKLYSRVVYMV
Sbjct: 461 MAGQKXTITAQDRKDPNQNTGISIHACKIVATGDLEASKGSFPTFLGRPWKLYSRVVYMV 520

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT
Sbjct: 521 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 580

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 581 VGQFIYGSSWLPSTGVSFSAGLSTN 605

[Close]

BLAST of HG10008895 vs. ExPASy TrEMBL
Match: A0A6J1DY95 (Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111024627 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.7e-76
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           MPGQKNTITAQDRKDPNQNTGISIHACKI+A  DLE SKGS+PTFLGRPWKLYSRVVYMV
Sbjct: 453 MPGQKNTITAQDRKDPNQNTGISIHACKILAASDLEGSKGSYPTFLGRPWKLYSRVVYMV 512

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEA KFT
Sbjct: 513 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEAGKFT 572

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGS+WLPSTGVSFSAGLSA+
Sbjct: 573 VGQFIYGSAWLPSTGVSFSAGLSAS 597

[Close]

BLAST of HG10008895 vs. ExPASy TrEMBL
Match: A0A6J1E2V1 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111430323 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.8e-76
Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M GQKNTITAQDRKDPNQNTGISIHACKI+AT DL+ASKGSFPT+LGRPWKLYSRVVYMV
Sbjct: 458 MSGQKNTITAQDRKDPNQNTGISIHACKIIATGDLQASKGSFPTYLGRPWKLYSRVVYMV 517

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITS +EA+KFT
Sbjct: 518 SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSAIEATKFT 577

Query: 121 VGQFIYGSSWLPSTGVSFSAGLSAN 146
           VGQFIYGSSWLPSTGVSFSAGLS N
Sbjct: 578 VGQFIYGSSWLPSTGVSFSAGLSTN 602

[Close]

BLAST of HG10008895 vs. TAIR 10
Match: AT5G53370.1 (pectin methylesterase PCR fragment F )

HSP 1 Score: 254.2 bits (648), Expect = 6.2e-68
Identity = 118/143 (82.52%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M  QK TITAQ+RKDPNQNTGISIHACK++AT DLEASKGS+PT+LGRPWKLYSRVVYM+
Sbjct: 444 MAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMM 503

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           S MGDHI PRGWLEW G FALD+LYYGEYMN G G+ +GQRVKWPGY VITSTVEASKFT
Sbjct: 504 SDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFT 563

Query: 121 VGQFIYGSSWLPSTGVSFSAGLS 144
           V QFI GSSWLPSTGVSF +GLS
Sbjct: 564 VAQFISGSSWLPSTGVSFFSGLS 586

[Close]

BLAST of HG10008895 vs. TAIR 10
Match: AT3G49220.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 234.2 bits (596), Expect = 6.7e-62
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           M  QKNTITAQ+RKDPNQNTGISIHA +++A  DL+A+ GS  T+LGRPWKL+SR VYM+
Sbjct: 455 MDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMM 514

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           S +G H+H RGWLEW  +FALDTLYYGEY+NSGPG+ +GQRV WPGYRVI ST EA++FT
Sbjct: 515 SYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFT 574

Query: 121 VGQFIYGSSWLPSTGVSFSAGLS 144
           V +FIYGSSWLPSTGVSF AGLS
Sbjct: 575 VAEFIYGSSWLPSTGVSFLAGLS 597

[Close]

BLAST of HG10008895 vs. TAIR 10
Match: AT3G43270.1 (Plant invertase/pectin methylesterase inhibitor superfamily )

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-49
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 0


Query: 1   MPGQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMV 60
           +P QKN+ITAQ RKDPN+ TG +I    I A  DL  +  +  T+LGRPWKLYSR V+M 
Sbjct: 384 LPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQ 443

Query: 61  SSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFT 120
           + M D I+P GWLEW G+FALDTLYYGEYMNSGPGA++ +RVKWPGY V+ ++ EA+ FT
Sbjct: 444 NYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFT 503

Query: 121 VGQFIYGSSWLPSTGVSFSAGL 143
           V Q I G+ WLPSTG++F AGL
Sbjct: 504 VSQLIQGNLWLPSTGITFIAGL 525

[Close]

BLAST of HG10008895 vs. TAIR 10
Match: AT1G53830.1 (pectin methylesterase 2 )

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 89/140 (63.57%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 3   GQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMVSS 62
           GQKN +TAQ R DPNQNTGI I  C+I  T DL A KG+FPT+LGRPWK YSR V M S 
Sbjct: 448 GQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSD 507

Query: 63  MGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVG 122
           + D I P GW EW GSFALDTL Y EY+N G GA    RVKW GY+VITS  EA  FT G
Sbjct: 508 ISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAG 567

Query: 123 QFIYGSSWLPSTGVSFSAGL 143
           QFI G  WL STG  FS  L
Sbjct: 568 QFIGGGGWLASTGFPFSLSL 587

[Close]

BLAST of HG10008895 vs. TAIR 10
Match: AT3G14310.1 (pectin methylesterase 3 )

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 86/140 (61.43%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 3   GQKNTITAQDRKDPNQNTGISIHACKIVATDDLEASKGSFPTFLGRPWKLYSRVVYMVSS 62
           GQKN +TAQ R DPNQNTGI I  C+I AT DL++ KGSFPT+LGRPWK YS+ V M S+
Sbjct: 453 GQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSA 512

Query: 63  MGDHIHPRGWLEWQGSFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTVEASKFTVG 122
           + D I P GW EW G+FAL+TL Y EY N+G GA    RVKW G++VIT+  EA K+T G
Sbjct: 513 ISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAG 572

Query: 123 QFIYGSSWLPSTGVSFSAGL 143
           QFI G  WL STG  FS GL
Sbjct: 573 QFIGGGGWLSSTGFPFSLGL 592

The following BLAST results are available for this feature:

BLAST of HG10008895 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654619.1	8.1e-78	97.93	probable pectinesterase/pectinesterase inhibitor 61 [Cucumis sativus] >KGN49865....	[more]
KAA0042550.1	2.4e-77	97.24	putative pectinesterase/pectinesterase inhibitor 61 [Cucumis melo var. makuwa] >...	[more]
XP_008437596.1	5.3e-77	97.24	PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor...	[more]
KAG6579321.1	6.9e-77	95.17	putative pectinesterase/pectinesterase inhibitor 61, partial [Cucurbita argyrosp...	[more]
XP_038874841.1	1.5e-76	95.86	probable pectinesterase/pectinesterase inhibitor 61 [Benincasa hispida]	[more]

BLAST of HG10008895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK05	8.8e-67	82.52	Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana OX=3...	[more]
Q9M3B0	9.4e-61	73.43	Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana OX=3...	[more]
Q9LXK7	2.4e-48	61.27	Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana OX=3...	[more]
Q43062	7.0e-48	62.41	Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=...	[more]
O04886	1.6e-47	65.00	Pectinesterase 1 OS=Citrus sinensis OX=2711 GN=PECS-1.1 PE=2 SV=1	[more]

BLAST of HG10008895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJG1	3.9e-78	97.93	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G139430 PE=3 SV=1	[more]
A0A5D3C3S5	1.1e-77	97.24	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00470...	[more]
A0A1S3AUZ6	2.6e-77	97.24	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103482964 PE=3 SV=1	[more]
A0A6J1DY95	1.7e-76	94.48	Pectinesterase OS=Momordica charantia OX=3673 GN=LOC111024627 PE=3 SV=1	[more]
A0A6J1E2V1	2.8e-76	93.79	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111430323 PE=3 SV=1	[more]

BLAST of HG10008895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53370.1	6.2e-68	82.52	pectin methylesterase PCR fragment F	[more]
AT3G49220.1	6.7e-62	73.43	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G43270.1	1.7e-49	61.27	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT1G53830.1	1.6e-47	63.57	pectin methylesterase 2	[more]
AT3G14310.1	1.6e-47	61.43	pectin methylesterase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 1..127 e-value: 2.4E-57 score: 193.9
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..142 e-value: 2.2E-45 score: 157.4
None	No IPR available	PANTHER	PTHR31707	PECTINESTERASE	coord: 1..142
None	No IPR available	PANTHER	PTHR31707:SF184	PECTINESTERASE	coord: 1..142
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008895.1	HG10008895.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity