HG10008888 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGAACCACTTCGAGACGTTAAGATTGCATACAAGTCAATCTTCAAGGTATTCAGAAGTAGTCCTTGAAAAATTATGTTGATTTTAATAGTGTTCTTTAAAAAGAGAAAAACCAAACAATAAAAAATACTAGCACAAGTAGTTTCCATAAGTTCAACTTTTATAAATAAGCAGATCATGAAATGTTTTTTATATTCTTTTTCTTTTCCAATGTGAAAAGGTTGGTGGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAAGACTATGATGAGACCAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGA ATGGTTGAACCACTTCGAGACGTTAAGATTGCATACAAGTCAATCTTCAAGGTTGGTGGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAAGACTATGATGAGACCAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGA ATGGTTGAACCACTTCGAGACGTTAAGATTGCATACAAGTCAATCTTCAAGGTTGGTGGCATCCAAATGAATGCAAGGAAGCTTATGACACTCGACGTACAAGACTATGATGAGACCAAAGCAAATAATAGACACGATCCGAAGAAGCCTGGAAATGGAAAGCCTTGA MVEPLRDVKIAYKSIFKVGGIQMNARKLMTLDVQDYDETKANNRHDPKKPGNGKP Homology
BLAST of HG10008888 vs. NCBI nr
Match: XP_038906524.1 (protein PSY2-like [Benincasa hispida]) HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19 Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of HG10008888 vs. NCBI nr
Match: KGN49855.1 (hypothetical protein Csa_000412 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 4.2e-19 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of HG10008888 vs. NCBI nr
Match: XP_022138250.1 (protein PSY2 [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of HG10008888 vs. NCBI nr
Match: TYK05946.1 (putative Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase [Cucumis melo var. makuwa]) HSP 1 Score: 95.5 bits (236), Expect = 1.5e-16 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of HG10008888 vs. NCBI nr
Match: XP_023550102.1 (protein PSY2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-15 Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of HG10008888 vs. ExPASy TrEMBL
Match: A0A0A0KJF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139330 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of HG10008888 vs. ExPASy TrEMBL
Match: A0A6J1C8Y2 (protein PSY2 OS=Momordica charantia OX=3673 GN=LOC111009471 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.9e-18 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of HG10008888 vs. ExPASy TrEMBL
Match: A0A5D3C6H5 (Putative Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00390 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of HG10008888 vs. ExPASy TrEMBL
Match: A0A6J1E2S8 (protein PSY2-like OS=Cucurbita moschata OX=3662 GN=LOC111430273 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-13 Identity = 39/55 (70.91%), Postives = 46/55 (83.64%), Query Frame = 0
BLAST of HG10008888 vs. ExPASy TrEMBL
Match: A0A6J1H1E3 (uncharacterized protein LOC111459477 OS=Cucurbita moschata OX=3662 GN=LOC111459477 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.9e-10 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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