HG10008866 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008866
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	small heat shock protein, chloroplastic
Location	Chr06: 336352 .. 337132 (-)
RNA-Seq Expression	HG10008866
Synteny	HG10008866

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAACTCTTTACTCTTCTCCTTCACCTCTGTTGTCCTTCAAACCCAAACCCCTTAAGAAAACCCCACCGGCACGAGTCACGGTCCTGCCTCTGAGGGTGAAAGCTGAGGCTGGAGCCGGTGGCGATCACAACAAAGATACATCTTTGGAGGTGCATGTCAATCCAAGCGGCCAGGGGACGTCCGTGGAGAGGCGGCCGGGGCCCAAGCGGCTGGCCCTGGACGTTTCACCTTATGGCAAGTCCTTTCAATACTAATTAATTACTTAAGTTGATAAGTCATTCCCATTTGTTAGAATGTTGGGGTGAAGTGAGATTGAATTACCCTTTTGCAGGAATTTTAGACCCTCTATCTCCAATGAGGACGATGAGGCAAATGCTGGACACAATGGACAGGTTATTCGACGACGCAGTAATGATGAGGCCAGGACGGAGATGGAGCAGGGGCGAGGTCCGAGCTCCTTGGGACATCGAAGAGAACGAAAACGAAATCAGGATGCGTTTTGACATGCCTGGCCTCTCCAAGGAACATGTCAAGGTTTCTGTTGAAGACCATTTTTTGATTATAAATGGCGGCCATGAGACTGAGACCACCAACACCAGCAGCAATGATGACGGCTGGTCCACAAGGAACACCTCTGCCTTCCACACCCGCCTCCAACTTCCTGATGGCGTTGACACAGACAACATCAAGGCCCAGCTTACCAATGGTGTTCTTTACATTACACTCCCCAAAATCAAAGTTCAACGCAAGGTCATGGATATAGAGATCCAGTAA

mRNA sequence

ATGGCTTCAACTCTTTACTCTTCTCCTTCACCTCTGTTGTCCTTCAAACCCAAACCCCTTAAGAAAACCCCACCGGCACGAGTCACGGTCCTGCCTCTGAGGGTGAAAGCTGAGGCTGGAGCCGGTGGCGATCACAACAAAGATACATCTTTGGAGGTGCATGTCAATCCAAGCGGCCAGGGGACGTCCGTGGAGAGGCGGCCGGGGCCCAAGCGGCTGGCCCTGGACGTTTCACCTTATGGCAAGTTATTCGACGACGCAGTAATGATGAGGCCAGGACGGAGATGGAGCAGGGGCGAGGTCCGAGCTCCTTGGGACATCGAAGAGAACGAAAACGAAATCAGGATGCGTTTTGACATGCCTGGCCTCTCCAAGGAACATGTCAAGGTTTCTGTTGAAGACCATTTTTTGATTATAAATGGCGGCCATGAGACTGAGACCACCAACACCAGCAGCAATGATGACGGCTGGTCCACAAGGAACACCTCTGCCTTCCACACCCGCCTCCAACTTCCTGATGGCGTTGACACAGACAACATCAAGGCCCAGCTTACCAATGGTGTTCTTTACATTACACTCCCCAAAATCAAAGTTCAACGCAAGGTCATGGATATAGAGATCCAGTAA

Coding sequence (CDS)

ATGGCTTCAACTCTTTACTCTTCTCCTTCACCTCTGTTGTCCTTCAAACCCAAACCCCTTAAGAAAACCCCACCGGCACGAGTCACGGTCCTGCCTCTGAGGGTGAAAGCTGAGGCTGGAGCCGGTGGCGATCACAACAAAGATACATCTTTGGAGGTGCATGTCAATCCAAGCGGCCAGGGGACGTCCGTGGAGAGGCGGCCGGGGCCCAAGCGGCTGGCCCTGGACGTTTCACCTTATGGCAAGTTATTCGACGACGCAGTAATGATGAGGCCAGGACGGAGATGGAGCAGGGGCGAGGTCCGAGCTCCTTGGGACATCGAAGAGAACGAAAACGAAATCAGGATGCGTTTTGACATGCCTGGCCTCTCCAAGGAACATGTCAAGGTTTCTGTTGAAGACCATTTTTTGATTATAAATGGCGGCCATGAGACTGAGACCACCAACACCAGCAGCAATGATGACGGCTGGTCCACAAGGAACACCTCTGCCTTCCACACCCGCCTCCAACTTCCTGATGGCGTTGACACAGACAACATCAAGGCCCAGCTTACCAATGGTGTTCTTTACATTACACTCCCCAAAATCAAAGTTCAACGCAAGGTCATGGATATAGAGATCCAGTAA

Protein sequence

MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPSGQGTSVERRPGPKRLALDVSPYGKLFDDAVMMRPGRRWSRGEVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ

Homology

[Close]

BLAST of HG10008866 vs. NCBI nr
Match: ADU55784.1 (HSP25.5 [Citrullus lanatus])

HSP 1 Score: 385.6 bits (989), Expect = 2.8e-103
Identity = 196/227 (86.34%), Postives = 203/227 (89.43%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPSGQ 60
           MASTL SSPSPLLSFKP+PLKKTPPARVTVLPLRV+AEAGAGGDHNKDTSLEVHVNPS Q
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPLRVRAEAGAGGDHNKDTSLEVHVNPSAQ 60

Query: 61  GTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRGEV 120
           GTSVERRPGPKRLALDVSPYG                   +LFDDAVMMRPG RWSRGEV
Sbjct: 61  GTSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMRPGWRWSRGEV 120

Query: 121 RAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRN 180
           RAPWDIEE+ENEIRMRFDMPGLSKEHVKVSVEDHFLII GGHETETTNTSSNDDGWSTRN
Sbjct: 121 RAPWDIEEHENEIRMRFDMPGLSKEHVKVSVEDHFLIIKGGHETETTNTSSNDDGWSTRN 180

Query: 181 TSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
            SA+HTRLQLP+G+DTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 ASAYHTRLQLPEGIDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 227

[Close]

BLAST of HG10008866 vs. NCBI nr
Match: XP_038875982.1 (small heat shock protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.9e-97
Identity = 190/229 (82.97%), Postives = 197/229 (86.03%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL SSPSPLLSFKP+PLKKTPPARVTVLP RVKAEAGAG DHNKD SLEVHVNPS  
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPPRVKAEAGAGSDHNKDASLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
           GQGTSVERRPGPKRLALDVSPYG                   +LFDDAVMM PG RWSRG
Sbjct: 61  GQGTSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMTPGWRWSRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
           EVRAPWDIEE+ENEIRMRFDMPGL+KEH KVSVED FLII GGHETETTN+SSNDDGWST
Sbjct: 121 EVRAPWDIEEHENEIRMRFDMPGLTKEHAKVSVEDDFLIIKGGHETETTNSSSNDDGWST 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           RN SA+HTRLQLPDGVD DNIKAQL+NGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLSNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of HG10008866 vs. NCBI nr
Match: XP_008437664.1 (PREDICTED: small heat shock protein, chloroplastic [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 181/229 (79.04%), Postives = 194/229 (84.72%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL  SPSPLLSFKP+PLKK P  RVTVLPLRV+AEAGA GD++KDTSLEVHVNPS  
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
           GQGTSVERRPGPKRLALD+SPYG                   +LFDDAVMM PG RW+RG
Sbjct: 61  GQGTSVERRPGPKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMSPGLRWNRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
            VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+FLII GGHE ET+NTSSNDDGWS 
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWSA 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           RN SA+HTRLQLPDGVD D+IKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of HG10008866 vs. NCBI nr
Match: XP_004145960.1 (small heat shock protein, chloroplastic [Cucumis sativus] >KGN49816.1 hypothetical protein Csa_000495 [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 5.4e-91
Identity = 181/229 (79.04%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL SSPS LLSFKP+PLKK PP RVTVLPLRV+AEAGA   ++KDTSLEVHVNPS  
Sbjct: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
           GQGTSVERRPG KRLALD+SPYG                   +LFDDAVMM PG RW+RG
Sbjct: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMTPGLRWNRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
            VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+FLII GGHE ET+NTSSNDDGWST
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           RN SA+HTRLQLPDGVD DNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of HG10008866 vs. NCBI nr
Match: KAA0042511.1 (small heat shock protein [Cucumis melo var. makuwa] >TYK05913.1 small heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87
Identity = 179/253 (70.75%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL  SPSPLLSFKP+PLKK P  RVTVLPLRV+AEAGA GD++KDTSLEVHVNPS  
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG------------------------------------- 120
           GQGTSVERRPGPKRLALD+SPY                                      
Sbjct: 61  GQGTSVERRPGPKRLALDISPYANFRYNTRSLTGVIGEVRFNYRFAGILDPLSPMRTMRQ 120

Query: 121 ------KLFDDAVMMRPGRRWSRGEVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDH 180
                 +LFDDAVMM PG RW+RG VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+
Sbjct: 121 MLETVDRLFDDAVMMSPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180

Query: 181 FLIINGGHETETTNTSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPK 209
           FLII GGHE ET+NTSSNDDGWS RN SA+HTRLQLPDGVD D+IKAQLTNGVLYITLPK
Sbjct: 181 FLIIKGGHEAETSNTSSNDDGWSARNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPK 240

[Close]

BLAST of HG10008866 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 96/187 (51.34%), Postives = 130/187 (69.52%), Query Frame = 0


Query: 42  GGDHNKDTSLEV-HVNPSGQGTSVERRPGPKRLALDVSPYG------------------- 101
           GGD NKD S+EV HV+   QGT+VE++  P+R A+D+SP+G                   
Sbjct: 1   GGD-NKDNSVEVQHVSKGDQGTAVEKK--PRRTAMDISPFGILDPWSPMRSMRQILDTMD 60

Query: 102 KLFDDAVMMRPGRRWSRGEVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIING 161
           ++F+D  M  PGR    GE+RAPWDI++ E+EIRMRFDMPGL+KE VKVSVED  L+I G
Sbjct: 61  RVFED-TMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKG 120

Query: 162 GHETETTNTSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRK 209
           GH++E  +    DD WS+R  S++ TRL+LPD  + D +KA+L NGVLYIT+PK KV+RK
Sbjct: 121 GHKSEQEH--GGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERK 180

[Close]

BLAST of HG10008866 vs. ExPASy Swiss-Prot
Match: P09886 (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-43
Identity = 103/235 (43.83%), Postives = 147/235 (62.55%), Query Frame = 0


Query: 4   TLYSSPSPLLSFKPKPLKKTPPARVTVLPLR----------VKAEAGAGGDHNKDTSLEV 63
           +L +  SP+LS KP    K+ P  +   PLR          V+A+AG  GD NKD S+EV
Sbjct: 6   SLSTIASPILSQKPGSSVKSTPPCMASFPLRRQLPRLGLRNVRAQAGGDGD-NKDNSVEV 65

Query: 64  H-VNPSGQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPG 123
           H VN   QGT+VER+  P+R ++D+SP+G                   ++F+DA+ + PG
Sbjct: 66  HRVNKDDQGTAVERK--PRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITI-PG 125

Query: 124 RRWSRGEVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSN 183
           R    GE+R PW+I++ E+EIRMRFDMPG+SKE VKVSVED  L+I   H  E    +  
Sbjct: 126 RNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREE----NGG 185

Query: 184 DDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           +D WS ++ S + TRL+LPD  + + +KA+L +GVLYIT+PK K++R V+D++IQ
Sbjct: 186 EDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232

[Close]

BLAST of HG10008866 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-42
Identity = 101/209 (48.33%), Postives = 134/209 (64.11%), Query Frame = 0


Query: 24  PPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVN-----PSGQGTSVERRPGPKRLALDVS 83
           P ++ +V     +  A A GD NKDTS++VHV+      + QG++VERR  P+R+ALDVS
Sbjct: 40  PYSKCSVRKPASRLVAQATGD-NKDTSVDVHVSNNNQGGNNQGSAVERR--PRRMALDVS 99

Query: 84  PYG-------------------KLFDDAVMMRPGRRWSRGEVRAPWDIEENENEIRMRFD 143
           P+G                   +LF+D +     R    GE+RAPWDI+++ENEI+MRFD
Sbjct: 100 PFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFD 159

Query: 144 MPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRNTSAFHTRLQLPDGVDTDN 203
           MPGLSKE VKVSVED  L+I G H+ E    S  DD W  RN S++ TRL LPD VD D 
Sbjct: 160 MPGLSKEEVKVSVEDDVLVIKGEHKKE---ESGKDDSWG-RNYSSYDTRLSLPDNVDKDK 219

Query: 204 IKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           +KA+L NGVL I++PK KV++KV D+EI+
Sbjct: 220 VKAELKNGVLLISIPKTKVEKKVTDVEIK 241

[Close]

BLAST of HG10008866 vs. ExPASy Swiss-Prot
Match: P31170 (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-37
Identity = 102/239 (42.68%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 1   MASTLYSSPSPLLS-FKPKP---LKKTPPARVTV---LPLRVKAEAGAGGDHNKDTSLEV 60
           MASTL  + S L S   P P    K   P  V+    +P R++A+        ++ S++V
Sbjct: 1   MASTLSFAASALCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQ------DQRENSIDV 60

Query: 61  ---HVNPSGQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMR 120
                    QG+SVE+RP  +RL +DVSP+G                   ++F+D + + 
Sbjct: 61  VQQGQQKGNQGSSVEKRP-QQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVS 120

Query: 121 PGRRWSRG--EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTN 180
              R   G  E+RAPWDI+E E+EI+MRFDMPGLSKE VK+SVED+ L+I G  + E   
Sbjct: 121 GRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE--- 180

Query: 181 TSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
              +DD WS R+ S++ TRLQLPD  + D IKA+L NGVL+IT+PK KV+RKV+D++IQ
Sbjct: 181 --DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227

[Close]

BLAST of HG10008866 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-37
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 0


Query: 21  KKTPPARVTVLPLR---VKAEAGAGGDHNKDTSLEVHVNP----SGQGTSVERRPGPKRL 80
           K + P  V V  +R    +  A A GD NKDTS++VH +     + QGT+VERR  P R+
Sbjct: 27  KVSAPCSVFVPSMRRPTTRLVARATGD-NKDTSVDVHHSSAQGGNNQGTAVERR--PTRM 86

Query: 81  ALDVSPYG-------------------KLFDDAVMMRPGRRWS--RGEVRAPWDIEENEN 140
           ALDVSP+G                   +LF+D  M  PGR  +   GE+R PWDI ++EN
Sbjct: 87  ALDVSPFGVLDPMSPMRTMRQMIDTMDRLFED-TMTFPGRNRASGTGEIRTPWDIHDDEN 146

Query: 141 EIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRNTSAFHTRLQLP 200
           EI+MRFDMPGLSKE VKVSVE+  L+I G H+ E      +  G   RN S++ TRL LP
Sbjct: 147 EIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWG---RNYSSYDTRLSLP 206

Query: 201 DGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEI 208
           D V  D IKA+L NGVL+I++PK +V++KV+D++I
Sbjct: 207 DNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234

[Close]

BLAST of HG10008866 vs. ExPASy TrEMBL
Match: H6TB37 (HSP25.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/227 (86.34%), Postives = 203/227 (89.43%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPSGQ 60
           MASTL SSPSPLLSFKP+PLKKTPPARVTVLPLRV+AEAGAGGDHNKDTSLEVHVNPS Q
Sbjct: 1   MASTLSSSPSPLLSFKPRPLKKTPPARVTVLPLRVRAEAGAGGDHNKDTSLEVHVNPSAQ 60

Query: 61  GTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRGEV 120
           GTSVERRPGPKRLALDVSPYG                   +LFDDAVMMRPG RWSRGEV
Sbjct: 61  GTSVERRPGPKRLALDVSPYGILDPLSPMRTMRQMLDTVDRLFDDAVMMRPGWRWSRGEV 120

Query: 121 RAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRN 180
           RAPWDIEE+ENEIRMRFDMPGLSKEHVKVSVEDHFLII GGHETETTNTSSNDDGWSTRN
Sbjct: 121 RAPWDIEEHENEIRMRFDMPGLSKEHVKVSVEDHFLIIKGGHETETTNTSSNDDGWSTRN 180

Query: 181 TSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
            SA+HTRLQLP+G+DTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 ASAYHTRLQLPEGIDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 227

[Close]

BLAST of HG10008866 vs. ExPASy TrEMBL
Match: A0A1S3AV56 (small heat shock protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483006 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.9e-92
Identity = 181/229 (79.04%), Postives = 194/229 (84.72%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL  SPSPLLSFKP+PLKK P  RVTVLPLRV+AEAGA GD++KDTSLEVHVNPS  
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
           GQGTSVERRPGPKRLALD+SPYG                   +LFDDAVMM PG RW+RG
Sbjct: 61  GQGTSVERRPGPKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMSPGLRWNRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
            VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+FLII GGHE ET+NTSSNDDGWS 
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWSA 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           RN SA+HTRLQLPDGVD D+IKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of HG10008866 vs. ExPASy TrEMBL
Match: A0A0A0KQ14 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G138480 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.6e-91
Identity = 181/229 (79.04%), Postives = 193/229 (84.28%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL SSPS LLSFKP+PLKK PP RVTVLPLRV+AEAGA   ++KDTSLEVHVNPS  
Sbjct: 1   MASTLSSSPSLLLSFKPRPLKKIPPPRVTVLPLRVRAEAGASSGNSKDTSLEVHVNPSSQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
           GQGTSVERRPG KRLALD+SPYG                   +LFDDAVMM PG RW+RG
Sbjct: 61  GQGTSVERRPGSKRLALDISPYGILDPLSPMRTMRQMLETVDRLFDDAVMMTPGLRWNRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
            VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+FLII GGHE ET+NTSSNDDGWST
Sbjct: 121 GVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDNFLIIKGGHEAETSNTSSNDDGWST 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           RN SA+HTRLQLPDGVD DNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ
Sbjct: 181 RNASAYHTRLQLPDGVDKDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 229

[Close]

BLAST of HG10008866 vs. ExPASy TrEMBL
Match: A0A5A7TLQ6 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00030 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.9e-88
Identity = 179/253 (70.75%), Postives = 192/253 (75.89%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPS-- 60
           MASTL  SPSPLLSFKP+PLKK P  RVTVLPLRV+AEAGA GD++KDTSLEVHVNPS  
Sbjct: 1   MASTLSYSPSPLLSFKPRPLKKIPLPRVTVLPLRVRAEAGASGDNSKDTSLEVHVNPSGQ 60

Query: 61  GQGTSVERRPGPKRLALDVSPYG------------------------------------- 120
           GQGTSVERRPGPKRLALD+SPY                                      
Sbjct: 61  GQGTSVERRPGPKRLALDISPYANFRYNTRSLTGVIGEVRFNYRFAGILDPLSPMRTMRQ 120

Query: 121 ------KLFDDAVMMRPGRRWSRGEVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDH 180
                 +LFDDAVMM PG RW+RG VRAPWDIEE+ENEIRMRFDMPGLSKE+VKVSVED+
Sbjct: 121 MLETVDRLFDDAVMMSPGLRWNRGGVRAPWDIEEHENEIRMRFDMPGLSKEYVKVSVEDN 180

Query: 181 FLIINGGHETETTNTSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPK 209
           FLII GGHE ET+NTSSNDDGWS RN SA+HTRLQLPDGVD D+IKAQLTNGVLYITLPK
Sbjct: 181 FLIIKGGHEAETSNTSSNDDGWSARNASAYHTRLQLPDGVDKDSIKAQLTNGVLYITLPK 240

[Close]

BLAST of HG10008866 vs. ExPASy TrEMBL
Match: A0A6J1E6G1 (small heat shock protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430395 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 166/229 (72.49%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MASTLYSSPSPLLSFKPKPLKKTPPARVTVLPLRVKAEAGAGGDHNKDTSLEVHVNPSG- 60
           MASTL SS SPLLSFKP+PLKK PP R+T LP RV+AE GAGGDH+KDTSLEVHVNPSG 
Sbjct: 1   MASTLSSSASPLLSFKPRPLKKAPPPRLTSLPFRVRAETGAGGDHSKDTSLEVHVNPSGQ 60

Query: 61  -QGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMRPGRRWSRG 120
            QGTSVERR  PKRLA+DVSPYG                   +LFDDA M+RPG  WSRG
Sbjct: 61  SQGTSVERRSSPKRLAMDVSPYGIFDPLSPMRTMRQMLDTVDRLFDDAAMLRPGGMWSRG 120

Query: 121 EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWST 180
           EVRAPWDIEE ENEI+MRFDMPGLSKEHVKVS+ED+FLII GGHE    +TSS+++GWST
Sbjct: 121 EVRAPWDIEEQENEIKMRFDMPGLSKEHVKVSIEDNFLIIKGGHE----DTSSHEEGWST 180

Query: 181 RNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
           +N SA+HTRLQLPDG+D DNIKA+L NGVLYITLPK K+QR VMDIEIQ
Sbjct: 181 KNASAYHTRLQLPDGIDKDNIKAKLNNGVLYITLPKTKIQRNVMDIEIQ 225

[Close]

BLAST of HG10008866 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 )

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 102/239 (42.68%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 1   MASTLYSSPSPLLS-FKPKP---LKKTPPARVTV---LPLRVKAEAGAGGDHNKDTSLEV 60
           MASTL  + S L S   P P    K   P  V+    +P R++A+        ++ S++V
Sbjct: 1   MASTLSFAASALCSPLAPSPSVSSKSATPFSVSFPRKIPSRIRAQ------DQRENSIDV 60

Query: 61  ---HVNPSGQGTSVERRPGPKRLALDVSPYG-------------------KLFDDAVMMR 120
                    QG+SVE+RP  +RL +DVSP+G                   ++F+D + + 
Sbjct: 61  VQQGQQKGNQGSSVEKRP-QQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVS 120

Query: 121 PGRRWSRG--EVRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTN 180
              R   G  E+RAPWDI+E E+EI+MRFDMPGLSKE VK+SVED+ L+I G  + E   
Sbjct: 121 GRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKE--- 180

Query: 181 TSSNDDGWSTRNTSAFHTRLQLPDGVDTDNIKAQLTNGVLYITLPKIKVQRKVMDIEIQ 209
              +DD WS R+ S++ TRLQLPD  + D IKA+L NGVL+IT+PK KV+RKV+D++IQ
Sbjct: 181 --DSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227

[Close]

BLAST of HG10008866 vs. TAIR 10
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-14
Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 101 VRAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTR 160
           VR  W+++E ++ + +R DMPGLS+E VK+++E + L+I G  ETE     S D      
Sbjct: 107 VRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDG----- 166

Query: 161 NTSAFHTRLQLPDGV-DTDNIKAQLTNGVLYITLPKIK 198
               F +R++LP+ V  TD IKA++ NGVL + +PKIK
Sbjct: 167 --RRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIK 197

[Close]

BLAST of HG10008866 vs. TAIR 10
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 9.7e-14
Identity = 37/104 (35.58%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 107 IEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTS-SNDDGWSTRNTSAF 166
           ++E ++  ++R+++PGL+KE VK++V D  L I G H+ E    S   D+ WS+++   +
Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYY 188

Query: 167 HTRLQLPDGVDTDNIKAQLTNGVLYITLPKI-KVQRKVMDIEIQ 209
           +T L LPD    ++IKA+L NGVL + +P+  K ++ V +I ++
Sbjct: 189 NTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 232

[Close]

BLAST of HG10008866 vs. TAIR 10
Match: AT1G52560.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 9.7e-14
Identity = 37/104 (35.58%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 107 IEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTS-SNDDGWSTRNTSAF 166
           ++E ++  ++R+++PGL+KE VK++V D  L I G H+ E    S   D+ WS+++   +
Sbjct: 122 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYY 181

Query: 167 HTRLQLPDGVDTDNIKAQLTNGVLYITLPKI-KVQRKVMDIEIQ 209
           +T L LPD    ++IKA+L NGVL + +P+  K ++ V +I ++
Sbjct: 182 NTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQEISVE 225

[Close]

BLAST of HG10008866 vs. TAIR 10
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6 )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 102 RAPWDIEENENEIRMRFDMPGLSKEHVKVSVEDHFLIINGGHETETTNTSSNDDGWSTRN 161
           R  WDI+E ++ + +R DMPGLS+E VK+++E   L+I G  + E       + G     
Sbjct: 106 RRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESG----- 165

Query: 162 TSAFHTRLQLPDGV-DTDNIKAQLTNGVLYITLPKIKVQRK--VMDIEI 208
              F +R+ LPD +   D IKA++ NGVL + +PK+K Q +  V  IEI
Sbjct: 166 NRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEI 209

The following BLAST results are available for this feature:

BLAST of HG10008866 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55784.1	2.8e-103	86.34	HSP25.5 [Citrullus lanatus]	[more]
XP_038875982.1	3.9e-97	82.97	small heat shock protein, chloroplastic [Benincasa hispida]	[more]
XP_008437664.1	1.4e-91	79.04	PREDICTED: small heat shock protein, chloroplastic [Cucumis melo]	[more]
XP_004145960.1	5.4e-91	79.04	small heat shock protein, chloroplastic [Cucumis sativus] >KGN49816.1 hypothetic...	[more]
KAA0042511.1	1.6e-87	70.75	small heat shock protein [Cucumis melo var. makuwa] >TYK05913.1 small heat shock...	[more]

BLAST of HG10008866 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09887	3.0e-44	51.34	Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP...	[more]
P09886	2.0e-43	43.83	Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 S...	[more]
P30222	2.8e-42	48.33	Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2...	[more]
P31170	1.6e-37	42.68	Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE...	[more]
Q95661	4.7e-37	46.51	Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21...	[more]

BLAST of HG10008866 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB37	1.3e-103	86.34	HSP25.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A1S3AV56	6.9e-92	79.04	small heat shock protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483006 ...	[more]
A0A0A0KQ14	2.6e-91	79.04	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G138480 PE=3 S...	[more]
A0A5A7TLQ6	7.9e-88	70.75	Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1E6G1	1.1e-84	72.49	small heat shock protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of HG10008866 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27670.1	1.1e-38	42.68	heat shock protein 21	[more]
AT5G51440.1	3.3e-14	41.84	HSP20-like chaperones superfamily protein	[more]
AT1G52560.1	9.7e-14	35.58	HSP20-like chaperones superfamily protein	[more]
AT1G52560.2	9.7e-14	35.58	HSP20-like chaperones superfamily protein	[more]
AT4G25200.1	1.4e-12	38.53	mitochondrion-localized small heat shock protein 23.6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 78..208 e-value: 3.9E-28 score: 100.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 84..206
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 106..208 e-value: 4.5E-26 score: 91.0
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 96..208 score: 25.305992
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	PANTHER	PTHR46733:SF4	HEAT SHOCK PROTEIN 21, CHLOROPLASTIC	coord: 82..208 coord: 7..81
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 106..195 e-value: 1.80997E-26 score: 95.3136
IPR044587	Heat shock protein 21-like	PANTHER	PTHR46733	26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 82..208 coord: 7..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008866.1	HG10008866.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009408	response to heat