
HG10008865 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAACTCCTGTGTTTCCTACAGAATCAAATTGCCTTGTTGTCTCAAAGTTGATGCTGCACACAAGCAGGGGGAAGCTTTGAAGATTGTTAAGTCAGATGGGAAGGTGTTGGAGTTCACCACGCCAACTCTTGTGAAGGATGTGTTAGTCAATTTCACTGGCTTTGTGATTGGATCCTCACAGGATGCCTCTCACGATTACCATTTATCCCCTGACTTTGAGTTGAAGATGGGTCAAGTTTATTACATGTTTCCTTTTCCCCAACCCACCGCCCTTCCTCCACCTCATTCCTTCATGGAAGATTCACACAAAAGCAGCAACACAAGGAGAGTCAGAATCGTTTTAACAAAGAAACAGCTCCAGCAGTTACTGGCCAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCAGCTTGAGCAAACCAGTTTGTGCAGTAATCTCGAATCTTCATCAACTTGGAAGCCAGCACTGGCAGCCATTCCCGAAGGAAATGAAGCGTAG ATGGGGAACTCCTGTGTTTCCTACAGAATCAAATTGCCTTGTTGTCTCAAAGTTGATGCTGCACACAAGCAGGGGGAAGCTTTGAAGATTGTTAAGTCAGATGGGAAGGTGTTGGAGTTCACCACGCCAACTCTTGTGAAGGATGTGTTAGTCAATTTCACTGGCTTTGTGATTGGATCCTCACAGGATGCCTCTCACGATTACCATTTATCCCCTGACTTTGAGTTGAAGATGGGTCAAGTTTATTACATGTTTCCTTTTCCCCAACCCACCGCCCTTCCTCCACCTCATTCCTTCATGGAAGATTCACACAAAAGCAGCAACACAAGGAGAGTCAGAATCGTTTTAACAAAGAAACAGCTCCAGCAGTTACTGGCCAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCAGCTTGAGCAAACCAGTTTGTGCAGTAATCTCGAATCTTCATCAACTTGGAAGCCAGCACTGGCAGCCATTCCCGAAGGAAATGAAGCGTAG ATGGGGAACTCCTGTGTTTCCTACAGAATCAAATTGCCTTGTTGTCTCAAAGTTGATGCTGCACACAAGCAGGGGGAAGCTTTGAAGATTGTTAAGTCAGATGGGAAGGTGTTGGAGTTCACCACGCCAACTCTTGTGAAGGATGTGTTAGTCAATTTCACTGGCTTTGTGATTGGATCCTCACAGGATGCCTCTCACGATTACCATTTATCCCCTGACTTTGAGTTGAAGATGGGTCAAGTTTATTACATGTTTCCTTTTCCCCAACCCACCGCCCTTCCTCCACCTCATTCCTTCATGGAAGATTCACACAAAAGCAGCAACACAAGGAGAGTCAGAATCGTTTTAACAAAGAAACAGCTCCAGCAGTTACTGGCCAAACAAGTGTCAATGGAAGAGCTAATTATGCAGCAGCTTGAGCAAACCAGTTTGTGCAGTAATCTCGAATCTTCATCAACTTGGAAGCCAGCACTGGCAGCCATTCCCGAAGGAAATGAAGCGTAG MGNSCVSYRIKLPCCLKVDAAHKQGEALKIVKSDGKVLEFTTPTLVKDVLVNFTGFVIGSSQDASHDYHLSPDFELKMGQVYYMFPFPQPTALPPPHSFMEDSHKSSNTRRVRIVLTKKQLQQLLAKQVSMEELIMQQLEQTSLCSNLESSSTWKPALAAIPEGNEA Homology
BLAST of HG10008865 vs. NCBI nr
Match: XP_038875983.1 (uncharacterized protein LOC120068327 [Benincasa hispida]) HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74 Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0
BLAST of HG10008865 vs. NCBI nr
Match: XP_011654573.1 (uncharacterized protein LOC105435418 [Cucumis sativus] >KGN49817.1 hypothetical protein Csa_000603 [Cucumis sativus]) HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72 Identity = 146/170 (85.88%), Postives = 156/170 (91.76%), Query Frame = 0
BLAST of HG10008865 vs. NCBI nr
Match: XP_008437666.1 (PREDICTED: uncharacterized protein LOC103483007 [Cucumis melo] >KAA0042512.1 uncharacterized protein E6C27_scaffold44G00030 [Cucumis melo var. makuwa] >TYK05914.1 uncharacterized protein E5676_scaffold376G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68 Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 0
BLAST of HG10008865 vs. NCBI nr
Match: XP_022922389.1 (uncharacterized protein LOC111430396 [Cucurbita moschata] >KAG7016794.1 hypothetical protein SDJN02_21905, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 7.0e-33 Identity = 92/167 (55.09%), Postives = 101/167 (60.48%), Query Frame = 0
BLAST of HG10008865 vs. NCBI nr
Match: KAG6579294.1 (hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32 Identity = 91/167 (54.49%), Postives = 101/167 (60.48%), Query Frame = 0
BLAST of HG10008865 vs. ExPASy TrEMBL
Match: A0A0A0KN21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G138490 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.3e-72 Identity = 146/170 (85.88%), Postives = 156/170 (91.76%), Query Frame = 0
BLAST of HG10008865 vs. ExPASy TrEMBL
Match: A0A5A7TGH5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00040 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 0
BLAST of HG10008865 vs. ExPASy TrEMBL
Match: A0A1S3AUP7 (uncharacterized protein LOC103483007 OS=Cucumis melo OX=3656 GN=LOC103483007 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 0
BLAST of HG10008865 vs. ExPASy TrEMBL
Match: A0A6J1E387 (uncharacterized protein LOC111430396 OS=Cucurbita moschata OX=3662 GN=LOC111430396 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 3.4e-33 Identity = 92/167 (55.09%), Postives = 101/167 (60.48%), Query Frame = 0
BLAST of HG10008865 vs. ExPASy TrEMBL
Match: A0A2I4GFW1 (uncharacterized protein LOC109007540 OS=Juglans regia OX=51240 GN=LOC109007540 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27 Identity = 77/170 (45.29%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of HG10008865 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 52/169 (30.77%), Postives = 83/169 (49.11%), Query Frame = 0
BLAST of HG10008865 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 7.3e-04 Identity = 25/64 (39.06%), Postives = 35/64 (54.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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