HG10008805 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008805
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic
LocationChr10: 26169637 .. 26177464 (-)
RNA-Seq ExpressionHG10008805
SyntenyHG10008805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCAATCATCAAGGGGGTCAGCAAATGTAAAACGGGTTGTTAAAATGATGGCCACCGTACATGCACCTGGTTTGACCATAAGAAGTTTCTCTGGACTCAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGAAAAGATTTTCATTCCAAGATGGCCATTACAATCTCTTCTAGGAGACGAAAGGCTAGCAGATGTGTTCCAAGAGCTATGTTTGAGCGGTTCACAGAAAAGGCAATTAAAGTCATCATGCTTGCCCAGGAGGAAGCGAGGCGTCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGCATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTAGGGGCAGTGGATTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTAGAGGAAGCTCGCCAACTTGGTAACTTCTCTTTCCCATCCCTTCCTGGGAAAAAGAAAAGAAAGAAAAAGGAACAAAACTGGACAGAATGTCAATTTGATTTCTCTCTGAATAGTTGTCAATTTTAATTTTCTTAGTTATTTATTTATTTTTATTATTATGCATGTTTGTATTTTGATTCTTCATTTAACATGAACTTCACCCCCCATGGGCAGCTTGGTGGTAAGTAAGGGCTTGAGGCTTTGGTGGGAGTTTGACTCAAGATCTGGGTTCAAGTCTAGAATGCTTAATAAGAGAGTTATTGTTCTCTCCTGGAGCTAATGTGAAGCGCACATAGTCTCTCCATGTAATAATAGTGTGTATATATGTGTGTGTATAAAACTTCATTTGAGCCATGCTATTGATATTGTACTTGGCTAGCATTTCATTGAAGTATTCTGTTTTTCTTTCAACTTGAAAACTTTAAACATTTCACTCTCTTTTATTTTTGTTTTGCACATGAAGAACTTTCTTTGGCTCATAACCAATAGTTAAGGGATGTGTCTATAAATATGTAGGTAGGTCCATGCTCCATTAGTTGGATCCTGTCTTATATATGCTGTTGGACTTCTTGACATTGTATTTTTCTGCATTTCCAGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACCTAGGTGCTGATCCTAGTAACATTCGTACTCAGGCAAGAATTACATCCTGACACTAATTTAGTTTATTTACTCTACTTAAACATTTATTTTTTAACTTAATTTTTTATAAATTGAGTGAACAGGTTATTCGAATGGTTGGTGAGAGCACCGAGGCTGTTGGTGCTGGTGTTGGAGGAGGAAGCAGTGGGAACAAGATGCCAACCCTGGAAGAGTATGGCACAAATTTAACTAAGCTGGCTGAAGAGGTGCTCTAGTAATACATTCCACTGTGACTTATGATGCGGAGTTGTTTGTTGTATGGAAACATGGGTTCTAAATCCTAATGTCAATTGCTTGCCTCTTCAGGGTAAACTAGATCCTGTTGTTGGAAGGCAGCAGCAAATAGAACGTGTAACCCAGATTTTGGGTCGGCGTACAAAAAATAATCCTTGCCTCATTGGCGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGTCTGGCGCAAAGGATTGCTAATGGGGATGTCCCTGAAACAATAGAAGGAAAGAAGGTTAGAATTCTTTTTCCACCATAACAGGGTCATTTTTTAAGAGTTCAAGAAAATACTTCCTTGTTGTGCATTAAACAATTAAGTACTGTTGTCATTATTAATAAAGCAGTGATTTTTTTGGTTTCCAACCGTGTGTGCATCTCTGGGAAAGAATTGAACTATAAAATGTTTAATAATAGGGCTAGAGAATGGGTGAGGTGTGTGATATGATTCATTCTGTGAGCTCTCCCATTGGCGTAGTCCCTCTTCTCCCATGGTTTTTTTTCTTCTTTCATTCTTCTTCTTCTTCTTCTCTCCTCAGTAGATGTAGAATCTATTTGGAGCATCTTTGAGTGAGCTCCGTTTTGCACTTAATTCACCTTTTTAACTGAAAGTATCTTTTCATTTCCTAAAAAACACGGGAGATGAACTTGAATTTGTGTAATTCACCCCATGTACTTTCCTGTTTGATCTTTTCATTAACTATTTTAAGGTTGTGGTTTTGACTTTTGTTTAGGGATGCTGAGATGGTATAATGTTATAATTGACCCATTCGGGGTTATAAATAAAAGAAAAAAAGATCAATACACACACACACACACAAAACACACATATTTAGGAAACTAACTTGATTCTAACAAACAGTAGAGATCCTTTGGTGATCTGTAAACACTAAACTTAATCTAGATTCTCTCTTCTTTTGATAGATTCATGGATATGGTTTTGTCTACTTTTGTCTACTACTTTTTATTGGTGCAAGGATAAGCACTCTTTTAATCATTTCGGTTTATCTTATTTAGTCTCCAATTAGAAATGCTTCGTGTAATTGCCTTTTGGGGTTTCCCAAATTTCATTAATCAATGAAATGCTTCTTATCAAAGGGAAAAATAAGTTGATCTAGATTCGAATAAACTGGAGACCTTGTTCTTGACCTCCATTTGTTTGTATGATTGGGACACGGACATCTAGCCCCTCTTTTTGAAGCTTTTGTTTTGCCCTTGTACTTATTTTTTAAGCTTCTTTTAGAAGTCCTGATGTGATCGTTGGAAAATGTTATATCTATTATTATTCTCTATTCATATTCTACCTTTTCAGCCAAGATATAAAATTTACATTTTTAATGGTAATTTTTTTTGACAATATATCTTAACCTGTATTGTAATATTTCTGGAATGATTTTTTTCCCCAAAATAATATATTTTTTTATGCATTCGTTACTGGTAAATTCTTGATCTGGGTTATGCATCTTCAGCATGTGGTTTCTTCTAAGTTGCATTATCTCTCAAACTTTCAAGAATTTATGCTTGACTTATGTAATTATTGTGCAAATACCATAATTGTAGTTAAGCATTACACTGCTCTTTGTTATGTTTGCTAGTACCAGAGGTTCTATGGGCCATCTTTGTGGCCTAACTTGAATTAAAAATTGTCTTTTGATCTGCAAGTCAGCAAGCTCTGATAAATATTCTCTTGATACAAATCAAGGGATTGCTGGAAAGATTGAAGTATTTGTTAAAAGTTTTCTGTTGTGTAGGTTATAACCCTGGATATGGGCCTTCTCGTAGCTGGCACAAATAGAGATTATCCTTTTTATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCGGCAAATATATTGAAACCTGCCCTCGCAAGAGGTGAACTGCAGGTAGTCCTGGGCATCTCGTTAAGATATTATAATTTAATCTATCTTTTCTTTAATTTTGTGATAAGAAACCTTGTATTTACTTAGAGACCACGGTAGAGGAAATTCCCACCAAAGAAAGCTATTGCATGAATACTTTCCATTCTATGTTAATATTGTATAATTATCAAACAGTTACTTGTGAAGGACACCCAAAATGGAGGTATTGAACAGTATCACAACAAATATCTATGGATCTCTCTTTGTCGTGACAAAGTTTCAAGTTCCATTACAACCGTATGAACCACAAGAAAAGCTCCAGTGCCACACTTCTAAAGATCTCTAGGGTTTCTTTCAAACCCATGGGATAGGGTTTCAAATAACCAATCTTCAATGTGATTGTGGGATAGGGTTTCAAATAACCAATCTTCAATGTGATTGGTGAAGCAGAAGTGGACATCAACGGAACTCTACATAAGAAACCAACTGGTAGAGGTAAAACGACAGTGTATGAAATGATGATCAGGCTTTCTCCCTCAGGAAAGGAAAAACGGTAACCCTGAGGGGAGGAGCCCCACTTCGATTTTTCTTGAGATCTTCTTTTTTTTTTTTTTGGAACAAGAGACAACTTTTCTATGAAACGAAAAGGGACTAATGCTCAAGGAAAACAAACTCTGCAAGGGAGTCTGTCTAGAGTGTTTAAGCTTCTGTATGCATGGGACCACAGAAAAAACTCAAGGAGAGCAAAAACGGTAACCTGAGGGAGAAAAAGCCCATCTTCAATTTTCTTAGAGGTCTAGTATTTAAACTTTTCAACGGAAGGGACCATTGAAAAAACTCGACTTCAAAAGGTAAATTATTAACCTGAGGGGAGAAGGCCAACTTCAATTTTTCTTTGGGAGTCTTAACTTGAGTATTTCAGCTTCTATATATACAAGGGACCACTGAAAAAACTCAACGTGGATAGCAAAAACAGTAACCCAAGTGGAGAAGACCCTGACTTTTATTTTTCTTTGGAAGTTGGATATGAGTTTTAAGCTTCTGTATGATAGGGACTACCGAAAAACTCGACTTTCTTTAGTTCAGAACTGGAGCTTCCAAGGGTACATGTCTCCCTGTATCTTAGTTAGAACCAACACTGATGGCATTGTTCTTGTCTCTATTCTTATCCGCTCAATTTTATTTTGGGAAGATTCTAGGATTTTGTTTAATGAAGAGATATCATCCATTATGGCAAGAAGTACTATAGTTGCTAAATATAGGATTATCAATGCTTATGTATTTGAGTTTTCTAAGAACGTTTTGGCTAGTTGCTTTCAATCCGTGTAAGTCCTAAAATGTTTTGGTTGGTTTGGAACTCTTATTTCTTAGTCTCCTATTGCTGATTATCTGGTTCTCTATTTTCACAGTGCATTGGAGCCACGACATTGGATGAATACAGGAAGCACATTGAGAAAGACCCAGCCTTAGAAAGAAGATTTCAGCCAGTCAAAGTGCCAGAACCATCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGGGAGCGGTATGAAATCCACCACAAACTTCGTTACACAGATGAAGCATTAGTAGCTGCTGCGCAGCTGTCATACCAGTACATCAGGTATGTTATCATTTAGTGATTCATCTGGAAGCATTTCTGTTGCAAAAAGCTGATAGTGCTGATGAAGTATCAAAATGAAAATGTTCTTGATTGTGTCTGCCATACTTCTTATCTTCTTGACCAACAACTTCAGTAATGGGGTTCATTCTTTTTCATGTGAAACGAAGAAACACCACACATCCAGTTTGAATATCTATTCTAGAATCAAGGAGCGAACTTTTAATTATTATTTTTTTTTTTTCAAATTCCCTGAGCGGCTGTGCAGTTAATGTCTGAGATTAGAAATTTATAGGGTGCTCATGGAGCTGTGCCTTCCCATATTTGTTATCTTAGGGGGCTTTATGGAAGCATCATGGGACACTGGAACATGTGAGGTCAGTGTGCCTGATGATATCAGCATGGTGCTGAGGCACCTGTTGTAATTTTTTTTACCCTTCTCTTCTTTCTTCTTCTCTCTTGAACCCCATCTGGGGGACTTAGAACATAAAGAGGGAAAACAGTTTGTCCCCATACATTAGTCGTGGTTCAAATTTAAATGTTTGTCAAGTTCTCATTTTTGGGATTATAAACCAAGTTTTCATTGAGGAAAATGAAAGAATAAGAAAGTCGAAAAATAAAGTCCAACAAAAAGGGAGACCAAGAACTTACTACAGGAATAGACTCCAATCTTACAAAATCAAACCAATATCACAATGTTTGTTAAGTTATAATTTCATCAGGGTAGCATATTTTGAATTATGAAGGTTTTCTATATTATGCACCTCACCTCGTTAAGGCTCATTTATTTCACCATCAGCTCTATAGAACTAGTGTACCCACTTCACGCCCTTTAAAAGATAATGCCTTGAAAATTATGTTATGATGTTTTAACGTTGACTTGTTCTACCTCCTAATTATTGACTAATGTTTTGGTTGGATAAAAATTTTATAATGTTCAAGTCCACATATTTTATTAGATTATAAAGTAGGATGAATGTGTGAAATTATTGCCTTGAGATGTCTTTGCATTATGATAATATTGACTTGTTTAGTTGATAGATTGCCTTTTCATATCTATATTTTCTGATATTATTAGTTTAGACCCTAGTTGCTTTTCCTAATTGGTTTGTGGAAAGTATGGTTTGATGGATAACTGTAAATTTCAGTGACCGATTCTTGCCTGATAAGGCAATCGACTTGGTTGATGAAGCAGGTTCTCGGGTTCGCCTTCGTCATGCTCAGGTATGTTCTCATCATCCCTGCAACTTCCCCAGCCCGCTTGTTCTTCTTCGTGATTATGCTACCTTTTTAATGTTATTTACAGCTACCTGAGGAAGCCAGGGAGCTTGAGAAAGAGCTGAGGCAGATCACAAAGGAGAAGAATGAGGCTGTTCGAAGTCAAGACTTTGAGAAGGTAAATTTGTTCTCTTCTCTTTCATTTTTCTTGTTACTTTCCGCCATTTGTGTTAGTTTTCTGGAACTGCATGATGGTTAAATTTTTAGTCTTGCCATGCCATTTCTTTAGTTAATAGTCTTGCCATGCCATTTCTTTAGTTAATACAGCTCTAGCAAATGTAACTTCGTGAACTTAAAACAGGCTGGAGAATTGCGTGATAGAGAAATGGAACTTAAGACTAAGATCTCTGCTCTAGTAGATAAGGGCAAGGAGATGAGCAAGGCTGAAAGCGAGGCAGGAGATGTAGGCCCCATTGTGACTGAGGTTGATATTCAGCATATTGTCTCCTCCTGGACTGGCATTCCTGTTGAGAAAGTATCTACCGACGAATCTGATCGCCTCCTGAAAATGGAAGAGACCCTCCATAAGAGGGTCATTGGTCAAGATGAAGCAGTTAAAGCCATCAGCCGTGCCATACGGCGAGCTCGTGTTGGTCTGAAGAATCCCAATCGTCCAATTGCAAGCTTTATATTTTCTGGTCCAACTGGTGTTGGTAAATCTGAGTTAGCAAAAGCGTTGGCTGCATACTATTTTGGGTCTGAAGAAGCAATGATCCGCCTTGACATGAGTGAATTTATGGAAAGGCATACGGTCTCCAAGCTCATTGGTTCCCCTCCTGGTTATGTTGGTTACACGGAGGGCGGTCAATTAACTGAGGCTGTTCGTCGTCGTCCATACACAGTGGTGCTCTTTGATGAGATTGAGAAGGCTCATCCTGATGTGTTCAACATGATGCTTCAAATCTTAGAGGATGGAAGGTTGACAGATAGTAAGGGTAGGACAGTAGACTTCAAAAATACACTTTTGATAATGACATCAAATGTGGGAAGCAGTGTTATAGAGAAGGGAGGTCGCAGAATAGGGTTTGACCTTGATTATGACGAGAAGGATAGTAGTTATAACCGGATCAAGAGCTTGGTGACAGAGGAACTGAAACAATACTTCAGGCCTGAGTTTTTGAATAGGTTGGACGAGATGATTGTCTTCCGTCAGCTCACAAAACTGGAGGTGAAAGAGATTGCGGATATAATGCTGAAGGAAGTATTTGATAGGTTAAAAGCAAAAGAAATAGACCTTCAAGTGACAGAGAGATTCAGAGATAGGGTGGTGGAGGAAGGATATAACCCAAGCTACGGTGCGAGACCATTGAGAAGGGCAATAATGAGACTTTTAGAGGACAGCATGGCAGAGAAGATGCTGGCAAGGGAGATCAAGGAGGGTGAGTCAGTAATAGTGGATGTTGATTCAGACGGAAACGTCACAGTGCTCAATGGCAGCAGTGGTGCTCCCGAGTCCTTGCCCGATGCCATCCCCGTGTAA

mRNA sequence

ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCAATCATCAAGGGGGTCAGCAAATGTAAAACGGGTTGTTAAAATGATGGCCACCGTACATGCACCTGGTTTGACCATAAGAAGTTTCTCTGGACTCAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGAAAAGATTTTCATTCCAAGATGGCCATTACAATCTCTTCTAGGAGACGAAAGGCTAGCAGATGTGTTCCAAGAGCTATGTTTGAGCGGTTCACAGAAAAGGCAATTAAAGTCATCATGCTTGCCCAGGAGGAAGCGAGGCGTCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGCATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTAGGGGCAGTGGATTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTAGAGGAAGCTCGCCAACTTGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTATTCGAATGGTTGGTGAGAGCACCGAGGCTGTTGGTGCTGGTGTTGGAGGAGGAAGCAGTGGGAACAAGATGCCAACCCTGGAAGAGTATGGCACAAATTTAACTAAGCTGGCTGAAGAGGGTAAACTAGATCCTGTTGTTGGAAGGCAGCAGCAAATAGAACGTGTAACCCAGATTTTGGGTCGGCGTACAAAAAATAATCCTTGCCTCATTGGCGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGTCTGGCGCAAAGGATTGCTAATGGGGATGTCCCTGAAACAATAGAAGGAAAGAAGCTGGCACAAATAGAGATTATCCTTTTTATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCGGCAAATATATTGAAACCTGCCCTCGCAAGAGGTGAACTGCAGTGCATTGGAGCCACGACATTGGATGAATACAGGAAGCACATTGAGAAAGACCCAGCCTTAGAAAGAAGATTTCAGCCAGTCAAAGTGCCAGAACCATCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGGGAGCGGTATGAAATCCACCACAAACTTCGTTACACAGATGAAGCATTAGTAGCTGCTGCGCAGCTGTCATACCAGTACATCAGGGTGCTCATGGAGCTGTGCCTTCCCATATTTGTTATCTTAGGGGGCTTTATGGAAGCATCATGGGACACTGGAACATGTGAGGTCAGTGTGCCTGATGATATCAGCATGGTGCTGAGGCACCTGTTTGACCGATTCTTGCCTGATAAGGCAATCGACTTGGTTGATGAAGCAGGTTCTCGGGTTCGCCTTCGTCATGCTCAGCTACCTGAGGAAGCCAGGGAGCTTGAGAAAGAGCTGAGGCAGATCACAAAGGAGAAGAATGAGGCTGTTCGAAGTCAAGACTTTGAGAAGGCTGGAGAATTGCGTGATAGAGAAATGGAACTTAAGACTAAGATCTCTGCTCTAGTAGATAAGGGCAAGGAGATGAGCAAGGCTGAAAGCGAGGCAGGAGATGTAGGCCCCATTGTGACTGAGGTTGATATTCAGCATATTGTCTCCTCCTGGACTGGCATTCCTGTTGAGAAAAAGGGAGGTCGCAGAATAGGGTTTGACCTTGATTATGACGAGAAGGATAGTAGTTATAACCGGATCAAGAGCTTGGTGACAGAGGAACTGAAACAATACTTCAGGCCTGAGTTTTTGAATAGGTTGGACGAGATGATTGTCTTCCGTCAGCTCACAAAACTGGAGGTGAAAGAGATTGCGGATATAATGCTGAAGGAAGTATTTGATAGGTTAAAAGCAAAAGAAATAGACCTTCAAGTGACAGAGAGATTCAGAGATAGGGTGGTGGAGGAAGGATATAACCCAAGCTACGGTGCGAGACCATTGAGAAGGGCAATAATGAGACTTTTAGAGGACAGCATGGCAGAGAAGATGCTGGCAAGGGAGATCAAGGAGGGTGAGTCAGTAATAGTGGATGTTGATTCAGACGGAAACGTCACAGTGCTCAATGGCAGCAGTGGTGCTCCCGAGTCCTTGCCCGATGCCATCCCCGTGTAA

Coding sequence (CDS)

ATGGCTAGAGTTCTGGTTCAGTCGACAAATATTCCTGGTTTGGTCGGTGGAAGAAAGAATGGCCAATCATCAAGGGGGTCAGCAAATGTAAAACGGGTTGTTAAAATGATGGCCACCGTACATGCACCTGGTTTGACCATAAGAAGTTTCTCTGGACTCAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTGGAAAAGATTTTCATTCCAAGATGGCCATTACAATCTCTTCTAGGAGACGAAAGGCTAGCAGATGTGTTCCAAGAGCTATGTTTGAGCGGTTCACAGAAAAGGCAATTAAAGTCATCATGCTTGCCCAGGAGGAAGCGAGGCGTCTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGCACTGGCATCGCTGCTAAGGTTCTTAAATCTATGGGAATTAATCTTAAAGATGCGCGCGTGGAGGTGGAGAAGATAATTGGTAGGGGCAGTGGATTTGTTGCTGTAGAAATTCCATTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTAGAGGAAGCTCGCCAACTTGGCCACAATTATATTGGGTCAGAGCACTTGCTTCTGGGACTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTATTCGAATGGTTGGTGAGAGCACCGAGGCTGTTGGTGCTGGTGTTGGAGGAGGAAGCAGTGGGAACAAGATGCCAACCCTGGAAGAGTATGGCACAAATTTAACTAAGCTGGCTGAAGAGGGTAAACTAGATCCTGTTGTTGGAAGGCAGCAGCAAATAGAACGTGTAACCCAGATTTTGGGTCGGCGTACAAAAAATAATCCTTGCCTCATTGGCGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGTCTGGCGCAAAGGATTGCTAATGGGGATGTCCCTGAAACAATAGAAGGAAAGAAGCTGGCACAAATAGAGATTATCCTTTTTATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCGGCAAATATATTGAAACCTGCCCTCGCAAGAGGTGAACTGCAGTGCATTGGAGCCACGACATTGGATGAATACAGGAAGCACATTGAGAAAGACCCAGCCTTAGAAAGAAGATTTCAGCCAGTCAAAGTGCCAGAACCATCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGGGAGCGGTATGAAATCCACCACAAACTTCGTTACACAGATGAAGCATTAGTAGCTGCTGCGCAGCTGTCATACCAGTACATCAGGGTGCTCATGGAGCTGTGCCTTCCCATATTTGTTATCTTAGGGGGCTTTATGGAAGCATCATGGGACACTGGAACATGTGAGGTCAGTGTGCCTGATGATATCAGCATGGTGCTGAGGCACCTGTTTGACCGATTCTTGCCTGATAAGGCAATCGACTTGGTTGATGAAGCAGGTTCTCGGGTTCGCCTTCGTCATGCTCAGCTACCTGAGGAAGCCAGGGAGCTTGAGAAAGAGCTGAGGCAGATCACAAAGGAGAAGAATGAGGCTGTTCGAAGTCAAGACTTTGAGAAGGCTGGAGAATTGCGTGATAGAGAAATGGAACTTAAGACTAAGATCTCTGCTCTAGTAGATAAGGGCAAGGAGATGAGCAAGGCTGAAAGCGAGGCAGGAGATGTAGGCCCCATTGTGACTGAGGTTGATATTCAGCATATTGTCTCCTCCTGGACTGGCATTCCTGTTGAGAAAAAGGGAGGTCGCAGAATAGGGTTTGACCTTGATTATGACGAGAAGGATAGTAGTTATAACCGGATCAAGAGCTTGGTGACAGAGGAACTGAAACAATACTTCAGGCCTGAGTTTTTGAATAGGTTGGACGAGATGATTGTCTTCCGTCAGCTCACAAAACTGGAGGTGAAAGAGATTGCGGATATAATGCTGAAGGAAGTATTTGATAGGTTAAAAGCAAAAGAAATAGACCTTCAAGTGACAGAGAGATTCAGAGATAGGGTGGTGGAGGAAGGATATAACCCAAGCTACGGTGCGAGACCATTGAGAAGGGCAATAATGAGACTTTTAGAGGACAGCATGGCAGAGAAGATGCTGGCAAGGGAGATCAAGGAGGGTGAGTCAGTAATAGTGGATGTTGATTCAGACGGAAACGTCACAGTGCTCAATGGCAGCAGTGGTGCTCCCGAGTCCTTGCCCGATGCCATCCCCGTGTAA

Protein sequence

MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLDNMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQIEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEKKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKEIDLQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGESVIVDVDSDGNVTVLNGSSGAPESLPDAIPV
Homology
[Close]
BLAST of HG10008805 vs. NCBI nr
Match: XP_038879609.1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Benincasa hispida])

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 693/965 (71.81%), Postives = 698/965 (72.33%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG SSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLRTG+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRTGRDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. NCBI nr
Match: XP_008464372.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Cucumis melo])

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 685/965 (70.98%), Postives = 695/965 (72.02%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. NCBI nr
Match: ADN33858.1 (ATP-dependent clp protease [Cucumis melo subsp. melo])

HSP 1 Score: 1189.5 bits (3076), Expect = 0.0e+00
Identity = 685/971 (70.55%), Postives = 695/971 (71.58%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------------VIRMVG 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR                     VIRMVG
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGKLFIFNLMFYNLSEQVIRMVG 240

Query: 241 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK 300
           ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK
Sbjct: 241 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK 300

Query: 301 NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------- 360
           NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                   
Sbjct: 301 NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERL 360

Query: 361 -----------EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR 420
                      EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
Sbjct: 361 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR 420

Query: 421 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY 480
           KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY
Sbjct: 421 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY 480

Query: 481 IRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAG 540
           I                                           DRFLPDKAIDLVDEAG
Sbjct: 481 IS------------------------------------------DRFLPDKAIDLVDEAG 540

Query: 541 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK 600
           SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK
Sbjct: 541 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK 600

Query: 601 GKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------- 660
           GKEMSKAESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                       
Sbjct: 601 GKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 780

[Close]
BLAST of HG10008805 vs. NCBI nr
Match: KAA0057729.1 (ATP-dependent clp protease [Cucumis melo var. makuwa] >TYJ98414.1 ATP-dependent clp protease [Cucumis melo var. makuwa])

HSP 1 Score: 1187.9 bits (3072), Expect = 0.0e+00
Identity = 685/975 (70.26%), Postives = 695/975 (71.28%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 10  MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 69

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 70  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 129

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 130 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 189

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR-------------------------VI 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR                         VI
Sbjct: 190 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSKLFIFNLMFYNLSEQVI 249

Query: 241 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG 300
           RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG
Sbjct: 250 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG 309

Query: 301 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI--------------- 360
           RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +               
Sbjct: 310 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEF 369

Query: 361 ---------------EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 420
                          EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL
Sbjct: 370 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 429

Query: 421 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL 480
           DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL
Sbjct: 430 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL 489

Query: 481 SYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLV 540
           SYQYI                                           DRFLPDKAIDLV
Sbjct: 490 SYQYIS------------------------------------------DRFLPDKAIDLV 549

Query: 541 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA 600
           DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA
Sbjct: 550 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA 609

Query: 601 LVDKGKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK------------------- 660
           LVDKGKEMSKAESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                   
Sbjct: 610 LVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKR 669

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 670 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 729

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 730 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 789

[Close]
BLAST of HG10008805 vs. NCBI nr
Match: XP_011648878.1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Cucumis sativus] >KAE8652372.1 hypothetical protein Csa_014009 [Cucumis sativus])

HSP 1 Score: 1179.9 bits (3051), Expect = 0.0e+00
Identity = 678/965 (70.26%), Postives = 692/965 (71.71%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG ++RGSANVKR VKMM+T H+PGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTTRGSANVKRAVKMMSTAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+ ++FHSK+A  ISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSRQNFHSKVATAISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVQA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1)

HSP 1 Score: 1046.2 bits (2704), Expect = 1.8e-304
Identity = 611/966 (63.25%), Postives = 646/966 (66.87%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MAR LVQST+IP  V G +  + + GS   KR V M+    +  LT+R F+GLRG N++D
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFN-GSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAID 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
            ++R+G+   SK+A     RR +  R VP+AMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  TLVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGES EAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLI
Sbjct: 241 GASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE LVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDL+DEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLIDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEA+ELEKELRQITKEKNEAVR QDFEKAGELRDREM+LK +I+AL+DK KE+SK
Sbjct: 541 HAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEA D GP+VTE DIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match: P35100 (Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 1046.2 bits (2704), Expect = 1.8e-304
Identity = 608/965 (63.01%), Postives = 647/965 (67.05%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVL QS ++PGLV G K+ Q  +GS   KR VK M  +   GL +  FSGLR FN L+
Sbjct: 1   MARVLAQSLSVPGLVAGHKDSQ-HKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLN 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
            M+R G DFHSK++  +SSRR +A R +PRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  TMMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LS EEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGES ++V
Sbjct: 181 LSQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADSV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
            A VG GSS NK PTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLI
Sbjct: 241 TATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                +IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           P LERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDEAL+AAAQLSYQYI     
Sbjct: 421 PDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRL+
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLQ 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEA+EL+KE+R+I KEK E VR+QDFEKAGELRD+EM+LK +ISAL++KGKEMSK
Sbjct: 541 HAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AE+E  D GPIVTEVDIQHIVSSWTGIPV+K                             
Sbjct: 601 AETETADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 1.4e-298
Identity = 611/968 (63.12%), Postives = 646/968 (66.74%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MAR LVQSTNI   V G + GQ + GS   +R V+M+  V      + +F+GLRG N+LD
Sbjct: 2   MARALVQSTNILPSVAGERAGQFN-GSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALD 61

Query: 61  NML-RTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFV 120
            +L ++G+  HSK+A     RR +  R VP+AMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 62  TLLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFV 121

Query: 121 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVL 180
           GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGF+AVEIPFTPRAKRVL
Sbjct: 122 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVL 181

Query: 181 ELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEA 240
           ELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGES+EA
Sbjct: 182 ELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESSEA 241

Query: 241 VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCL 300
           VGA VGGG+SG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCL
Sbjct: 242 VGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCL 301

Query: 301 IGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------ 360
           IGEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                        
Sbjct: 302 IGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME 361

Query: 361 ------EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 420
                 EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
Sbjct: 362 EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK 421

Query: 421 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLM 480
           DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKL YTDEA+ AAA+LS+QYI    
Sbjct: 422 DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYIS--- 481

Query: 481 ELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRL 540
                                                  DRFLPDKAIDL+DEAGSRVRL
Sbjct: 482 ---------------------------------------DRFLPDKAIDLIDEAGSRVRL 541

Query: 541 RHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMS 600
           RHAQLPEEARELEKELRQITKEKNEAVR QDFEKAGELRDREM+LK +ISAL+DK KE S
Sbjct: 542 RHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKS 601

Query: 601 KAESEAGD-VGPIVTEVDIQHIVSSWTGIPVEK--------------------------- 660
           KAESEAGD  GPIVTE DIQHIVSSWTGIPVEK                           
Sbjct: 602 KAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAV 661

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 662 KAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEF 721

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 722 MERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDG 781

[Close]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match: Q9FI56 (Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 PE=1 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 1.0e-291
Identity = 599/968 (61.88%), Postives = 642/968 (66.32%), Query Frame = 0 

Query: 3   RVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMAT-VHAPGLTIRSFSGLRGFNSLDN 62
           RVL QST  P L   ++N   SRGS   +R VKMM + +   GL ++ F GLRG N+LD 
Sbjct: 6   RVLAQSTP-PSLACYQRN-VPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDT 65

Query: 63  MLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 122
           + ++ +DFHSK+   ++  + KASR   +AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 66  LGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 125

Query: 123 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 182
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 126 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 185

Query: 183 SLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAVG 242
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGE+ E V 
Sbjct: 186 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNE-VT 245

Query: 243 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIG 302
           A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIG
Sbjct: 246 ANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 305

Query: 303 EPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI-------------------------- 362
           EPGVGKTAIAEGLAQRIA+GDVPETIEGKK+  +                          
Sbjct: 306 EPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 365

Query: 363 ----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 422
               EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
Sbjct: 366 RQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 425

Query: 423 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLMEL 482
           ALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LVAAAQLSYQYI      
Sbjct: 426 ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYIS----- 485

Query: 483 CLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLRH 542
                                                DRFLPDKAIDL+DEAGSRVRLRH
Sbjct: 486 -------------------------------------DRFLPDKAIDLIDEAGSRVRLRH 545

Query: 543 AQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKA 602
           AQ+PEEARELEKELRQITKEKNEAVR QDFEKAG LRDRE+EL+ ++SA+  KGKEMSKA
Sbjct: 546 AQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKA 605

Query: 603 ESEAGDVGPIVTEVDIQHIVSSWTGIPVEK------------------------------ 662
           ESE G+ GP+VTE DIQHIVSSWTGIPVEK                              
Sbjct: 606 ESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAI 665

Query: 663 ------------------------------------------------------------ 722
                                                                       
Sbjct: 666 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 725

Query: 723 ------------------------------------------------------------ 745
                                                                       
Sbjct: 726 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 785

[Close]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match: Q7F9I1 (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 998.0 bits (2579), Expect = 5.5e-290
Identity = 589/961 (61.29%), Postives = 633/961 (65.87%), Query Frame = 0 

Query: 5   LVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLDNMLR 64
           LVQS   P +   R++G +      V+    MM T+    LT+  F GLR  N LD+   
Sbjct: 5   LVQSAIAPTIY--RRSGTA---RFRVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSV 64

Query: 65  TGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI 124
             +DF S +A  IS  R   SR V RAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI
Sbjct: 65  IKRDFGSIVASQISRPRGLGSRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQI 124

Query: 125 LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLE 184
           LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLE
Sbjct: 125 LLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLE 184

Query: 185 EARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAVGAGV 244
           EARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAVGAGV
Sbjct: 185 EARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGV 244

Query: 245 GGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPG 304
           GGGSSG KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPG
Sbjct: 245 GGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPG 304

Query: 305 VGKTAIAEGLAQRIANGDVPETIEGKKLAQI----------------------------- 364
           VGKTAIAEGLAQRI+NGDVPETIEGKK+  +                             
Sbjct: 305 VGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQN 364

Query: 365 -EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE 424
            +IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE
Sbjct: 365 DDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALE 424

Query: 425 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLMELCLP 484
           RRFQPVKVPEP+VDETIQIL+GLRERYE+HHKLRYTD++L+AAAQLSYQYI         
Sbjct: 425 RRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLSYQYIS-------- 484

Query: 485 IFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLRHAQL 544
                                             DRFLPDKAIDL+DEAGSRVRLRHAQL
Sbjct: 485 ----------------------------------DRFLPDKAIDLIDEAGSRVRLRHAQL 544

Query: 545 PEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKAESE 604
           P+EA+EL+KELRQ+TK+KNEAVR QDFEKAGELRDREMELK +I+A++DK KEM KAE+E
Sbjct: 545 PDEAKELDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETE 604

Query: 605 AGDVGPIVTEVDIQHIVSSWTGIPVEK--------------------------------- 664
           +G+VGP+VTE DIQHIVSSWTGIPVEK                                 
Sbjct: 605 SGEVGPLVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRA 664

Query: 665 ------------------------------------------------------------ 724
                                                                       
Sbjct: 665 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 724

Query: 725 ------------------------------------------------------------ 745
                                                                       
Sbjct: 725 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 784

[Close]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match: A0A1S3CMV1 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502278 PE=3 SV=1)

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 685/965 (70.98%), Postives = 695/965 (72.02%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match: E5GBL8 (ATP-dependent clp protease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 1189.5 bits (3076), Expect = 0.0e+00
Identity = 685/971 (70.55%), Postives = 695/971 (71.58%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------------VIRMVG 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR                     VIRMVG
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGKLFIFNLMFYNLSEQVIRMVG 240

Query: 241 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK 300
           ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK
Sbjct: 241 ESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTK 300

Query: 301 NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------- 360
           NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                   
Sbjct: 301 NNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERL 360

Query: 361 -----------EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR 420
                      EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR
Sbjct: 361 KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYR 420

Query: 421 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY 480
           KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY
Sbjct: 421 KHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQY 480

Query: 481 IRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAG 540
           I                                           DRFLPDKAIDLVDEAG
Sbjct: 481 IS------------------------------------------DRFLPDKAIDLVDEAG 540

Query: 541 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK 600
           SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK
Sbjct: 541 SRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDK 600

Query: 601 GKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------- 660
           GKEMSKAESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                       
Sbjct: 601 GKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQ 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 DEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLD 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 MSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQI 780

[Close]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match: A0A5D3BH35 (ATP-dependent clp protease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00100 PE=3 SV=1)

HSP 1 Score: 1187.9 bits (3072), Expect = 0.0e+00
Identity = 685/975 (70.26%), Postives = 695/975 (71.28%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG +SRGSA+VKR VKMMAT H+PGL IR+FSGLRGFNSLD
Sbjct: 10  MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 69

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLR+G+DFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 70  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 129

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 130 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 189

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR-------------------------VI 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR                         VI
Sbjct: 190 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSKLFIFNLMFYNLSEQVI 249

Query: 241 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG 300
           RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG
Sbjct: 250 RMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILG 309

Query: 301 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI--------------- 360
           RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +               
Sbjct: 310 RRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEF 369

Query: 361 ---------------EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 420
                          EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL
Sbjct: 370 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTL 429

Query: 421 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL 480
           DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL
Sbjct: 430 DEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQL 489

Query: 481 SYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLV 540
           SYQYI                                           DRFLPDKAIDLV
Sbjct: 490 SYQYIS------------------------------------------DRFLPDKAIDLV 549

Query: 541 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA 600
           DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA
Sbjct: 550 DEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISA 609

Query: 601 LVDKGKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK------------------- 660
           LVDKGKEMSKAESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                   
Sbjct: 610 LVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKR 669

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 670 VIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAM 729

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 730 IRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM 789

[Close]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match: A0A6J1BYC4 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006853 PE=3 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 679/965 (70.36%), Postives = 692/965 (71.71%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG  SRGS NVKR VKMMA+VH+PGL IRSFSGLRGFN+LD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNG-ISRGSGNVKRAVKMMASVHSPGLRIRSFSGLRGFNALD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLRTG+DFHSKMAITISSRR KA+RCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRTGRDFHSKMAITISSRRGKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQIL+GLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILQGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match: A0A6J1IA80 (chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473094 PE=3 SV=1)

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 679/965 (70.36%), Postives = 690/965 (71.50%), Query Frame = 0 

Query: 1   MARVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMATVHAPGLTIRSFSGLRGFNSLD 60
           MARVLVQSTNIPGLVGGRKNG  SRGS NVKR V+MMA+VHAPG  IRSFSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNG-LSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLD 60

Query: 61  NMLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120
           NMLRT +DFHSK+AITISSRRRKA+RCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAV 240
           LSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGESTEAV
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAV 240

Query: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300
           GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI
Sbjct: 241 GAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLI 300

Query: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI------------------------- 360
           GEPGVGKTAIAEGLAQRIANGDVPETIEGKK+  +                         
Sbjct: 301 GEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE 360

Query: 361 -----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420
                EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD
Sbjct: 361 IKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKD 420

Query: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLME 480
           PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI     
Sbjct: 421 PALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS---- 480

Query: 481 LCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLR 540
                                                 DRFLPDKAIDLVDEAGSRVRLR
Sbjct: 481 --------------------------------------DRFLPDKAIDLVDEAGSRVRLR 540

Query: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSK 600
           HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREME KTKISALVDKGKEMSK
Sbjct: 541 HAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMEFKTKISALVDKGKEMSK 600

Query: 601 AESEAGDVGPIVTEVDIQHIVSSWTGIPVEK----------------------------- 660
           AESEAGDVGP+VTEVDIQHIVSSWTGIPVEK                             
Sbjct: 601 AESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKA 660

Query: 661 ------------------------------------------------------------ 720
                                                                       
Sbjct: 661 ISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFME 720

Query: 721 ------------------------------------------------------------ 745
                                                                       
Sbjct: 721 RHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRL 780

[Close]
BLAST of HG10008805 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 1003.8 bits (2594), Expect = 7.1e-293
Identity = 599/968 (61.88%), Postives = 642/968 (66.32%), Query Frame = 0 

Query: 3   RVLVQSTNIPGLVGGRKNGQSSRGSANVKRVVKMMAT-VHAPGLTIRSFSGLRGFNSLDN 62
           RVL QST  P L   ++N   SRGS   +R VKMM + +   GL ++ F GLRG N+LD 
Sbjct: 6   RVLAQSTP-PSLACYQRN-VPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDT 65

Query: 63  MLRTGKDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 122
           + ++ +DFHSK+   ++  + KASR   +AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 66  LGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 125

Query: 123 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 182
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 126 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 185

Query: 183 SLEEARQLGHNYIGSEHLLLGLLREGEGVAAR---------------VIRMVGESTEAVG 242
           SLEEARQLGHNYIGSEHLLLGLLREGEGVAAR               VIRMVGE+ E V 
Sbjct: 186 SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNE-VT 245

Query: 243 AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIG 302
           A VGGGSS NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIG
Sbjct: 246 ANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG 305

Query: 303 EPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQI-------------------------- 362
           EPGVGKTAIAEGLAQRIA+GDVPETIEGKK+  +                          
Sbjct: 306 EPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI 365

Query: 363 ----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 422
               EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
Sbjct: 366 RQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP 425

Query: 423 ALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRVLMEL 482
           ALERRFQPVKVPEP+VDETIQILKGLRERYEIHHKLRYTDE+LVAAAQLSYQYI      
Sbjct: 426 ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYIS----- 485

Query: 483 CLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKAIDLVDEAGSRVRLRH 542
                                                DRFLPDKAIDL+DEAGSRVRLRH
Sbjct: 486 -------------------------------------DRFLPDKAIDLIDEAGSRVRLRH 545

Query: 543 AQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMELKTKISALVDKGKEMSKA 602
           AQ+PEEARELEKELRQITKEKNEAVR QDFEKAG LRDRE+EL+ ++SA+  KGKEMSKA
Sbjct: 546 AQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKA 605

Query: 603 ESEAGDVGPIVTEVDIQHIVSSWTGIPVEK------------------------------ 662
           ESE G+ GP+VTE DIQHIVSSWTGIPVEK                              
Sbjct: 606 ESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHKRIIGQDEAVKAI 665

Query: 663 ------------------------------------------------------------ 722
                                                                       
Sbjct: 666 SRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMER 725

Query: 723 ------------------------------------------------------------ 745
                                                                       
Sbjct: 726 HTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLT 785

[Close]
BLAST of HG10008805 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 955.7 bits (2469), Expect = 2.2e-278
Identity = 568/939 (60.49%), Postives = 622/939 (66.24%), Query Frame = 0 

Query: 34  VKMMATVHAPGLTIRSFSGLRGFNSLDNMLRTGKDFHSKMAITISSRRRKASRCVPRAMF 93
           VKMM+++ AP LTI+SFSGLR  ++LD + R    F  K  +  SS R KASRCVP+AMF
Sbjct: 56  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 115

Query: 94  ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 153
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 116 ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 175

Query: 154 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 213
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR
Sbjct: 176 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 235

Query: 214 ---------------VIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKL 273
                          VIRMVGE+ E V A VGGGSSGN KMPTLEEYGTNLTKLAEEGKL
Sbjct: 236 VLENLGADPSNIRTQVIRMVGENNE-VTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKL 295

Query: 274 DPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKL 333
           DPVVGRQ QIERV QIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGK +
Sbjct: 296 DPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTV 355

Query: 334 AQI------------------------------EIILFIDEVHTLIGAGAAEGAIDAANI 393
             +                              EIILFIDEVHTLIGAGAAEGAIDAANI
Sbjct: 356 ITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANI 415

Query: 394 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 453
           LKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYE
Sbjct: 416 LKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYE 475

Query: 454 IHHKLRYTDEALVAAAQLSYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISM 513
           IHHKLRYTDEALVAAAQLS+QYI                                     
Sbjct: 476 IHHKLRYTDEALVAAAQLSHQYIS------------------------------------ 535

Query: 514 VLRHLFDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFE 573
                 DRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVRSQDFE
Sbjct: 536 ------DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFE 595

Query: 574 KAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK- 633
            AG  RDRE+ELK +I+ ++ +GKE++KAE+EA + GP VTE DIQHIV++WTGIPVEK 
Sbjct: 596 MAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKV 655

Query: 634 ------------------------------------------------------------ 693
                                                                       
Sbjct: 656 SSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 715

Query: 694 ------------------------------------------------------------ 745
                                                                       
Sbjct: 716 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 775

[Close]
BLAST of HG10008805 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 955.7 bits (2469), Expect = 2.2e-278
Identity = 568/939 (60.49%), Postives = 622/939 (66.24%), Query Frame = 0 

Query: 34  VKMMATVHAPGLTIRSFSGLRGFNSLDNMLRTGKDFHSKMAITISSRRRKASRCVPRAMF 93
           VKMM+++ AP LTI+SFSGLR  ++LD + R    F  K  +  SS R KASRCVP+AMF
Sbjct: 25  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 84

Query: 94  ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 153
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 85  ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 144

Query: 154 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 213
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR
Sbjct: 145 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAAR 204

Query: 214 ---------------VIRMVGESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKL 273
                          VIRMVGE+ E V A VGGGSSGN KMPTLEEYGTNLTKLAEEGKL
Sbjct: 205 VLENLGADPSNIRTQVIRMVGENNE-VTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKL 264

Query: 274 DPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKL 333
           DPVVGRQ QIERV QIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGK +
Sbjct: 265 DPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTV 324

Query: 334 AQI------------------------------EIILFIDEVHTLIGAGAAEGAIDAANI 393
             +                              EIILFIDEVHTLIGAGAAEGAIDAANI
Sbjct: 325 ITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANI 384

Query: 394 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYE 453
           LKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYE
Sbjct: 385 LKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYE 444

Query: 454 IHHKLRYTDEALVAAAQLSYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISM 513
           IHHKLRYTDEALVAAAQLS+QYI                                     
Sbjct: 445 IHHKLRYTDEALVAAAQLSHQYIS------------------------------------ 504

Query: 514 VLRHLFDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFE 573
                 DRFLPDKAIDL+DEAGSRVRLRHAQLPEEARELEK+LRQITKEKNEAVRSQDFE
Sbjct: 505 ------DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQITKEKNEAVRSQDFE 564

Query: 574 KAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPIVTEVDIQHIVSSWTGIPVEK- 633
            AG  RDRE+ELK +I+ ++ +GKE++KAE+EA + GP VTE DIQHIV++WTGIPVEK 
Sbjct: 565 MAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEGGPTVTESDIQHIVATWTGIPVEKV 624

Query: 634 ------------------------------------------------------------ 693
                                                                       
Sbjct: 625 SSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGK 684

Query: 694 ------------------------------------------------------------ 745
                                                                       
Sbjct: 685 SELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPY 744

[Close]
BLAST of HG10008805 vs. TAIR 10
Match: AT5G51070.1 (Clp ATPase )

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-92
Identity = 279/904 (30.86%), Postives = 407/904 (45.02%), Query Frame = 0 

Query: 81  RRKASRCVP-RAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE-------- 140
           +RK  +  P  A+FERFTE+AI+ I+ +Q+EA+ LG + V T+ +LLGLI E        
Sbjct: 67  QRKRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDRDPQGFL 126

Query: 141 GTGIAA-KVLKSMGINLKDARVEVEKIIGRGSGF-VAVEIPFTPRAKRVLELSLEEARQL 200
           G+GI   K  +++     +A  + ++     + +  + ++PF+   KRV E ++E +R +
Sbjct: 127 GSGITIDKAREAVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVEYSRTM 186

Query: 201 GHNYIGSEHLLLGLLREGEGVAARVIRMVGESTEAVGAG--------------------- 260
              YI  EH+ +GL    +G A RV++ +G +   + A                      
Sbjct: 187 DCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREPSSSSK 246

Query: 261 -----------VGGGSSGNKMP-TLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 320
                       G G  G K    LE++  +LT  A EG +DPV+GR+++++RV QIL R
Sbjct: 247 GSFESPPSGRIAGSGPGGKKAKNVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCR 306

Query: 321 RTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKLAQIEI-------------- 380
           RTKNNP L+GE GVGKTAIAEGLA  IA    P  +  K++  ++I              
Sbjct: 307 RTKNNPILLGEAGVGKTAIAEGLAISIAEASAPGFLLTKRIMSLDIGLLMAGAKERGELE 366

Query: 381 ----------------ILFIDEVHTLIGAGAA-----EGAIDAANILKPALARGELQCIG 440
                           ILFIDEVHTLIG+G          +D AN+LKP+L RGELQCI 
Sbjct: 367 ARVTALISEVKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGELQCIA 426

Query: 441 ATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVA 500
           +TTLDE+R   EKD AL RRFQPV + EPS ++ ++IL GLRE+YE HH  +YT EA+ A
Sbjct: 427 STTLDEFRSQFEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTMEAIDA 486

Query: 501 AAQLSYQYIRVLMELCLPIFVILGGFMEASWDTGTCEVSVPDDISMVLRHLFDRFLPDKA 560
           A  LS +YI                                           DRFLPDKA
Sbjct: 487 AVYLSSRYIA------------------------------------------DRFLPDKA 546

Query: 561 IDLVDEAGSRVRL--------------------------------------RHAQ----- 620
           IDL+DEAGSR R+                                      R  Q     
Sbjct: 547 IDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQEIKTVQAMHEVVLSSRQKQDDGDA 606

Query: 621 LPEEARELEKE-------------------------------LRQITKEKNEAVRSQDFE 680
           + +E+ EL +E                               ++QIT ++   + S + +
Sbjct: 607 ISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQ 666

Query: 681 KAGELRDREMELKTKISALVDKGK------------------------EMSKA------E 728
             G +  ++ E    IS  V + +                        E++KA       
Sbjct: 667 LRGRVVGQD-EAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFG 726

[Close]
BLAST of HG10008805 vs. TAIR 10
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 326.2 bits (835), Expect = 6.6e-89
Identity = 201/346 (58.09%), Postives = 225/346 (65.03%), Query Frame = 0 

Query: 92  MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 151
           MFERFTEKAIKVI LAQEEARRLG+NF GTE ILL LIGEGTGIAAKVLKSMGINLKDAR
Sbjct: 1   MFERFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDAR 60

Query: 152 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 211
           VEVEKIIGRGSGFV VEIPFTPR K         +    H                +G+A
Sbjct: 61  VEVEKIIGRGSGFVVVEIPFTPR-KACAGFVTRGSSTTRH----------------KGIA 120

Query: 212 ARVIRMVGESTEAVGAGVGGGSSGNKMPTL----EEYGTNLTKLAEEGKLDPVVGRQQQI 271
            RV+ ++G     +   V      N    L     E  T        GKLDPVVGRQ QI
Sbjct: 121 VRVLEILGADPSNIRTQVNAPILVNSQQALVAEVMETATWQVGNTRRGKLDPVVGRQPQI 180

Query: 272 ERVTQILGRRT-KNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK----------- 331
           +RV QIL RRT +NN CLIG+PGVGK AIAEG+AQRIA+GDVPETI+GK           
Sbjct: 181 KRVVQILARRTCRNNACLIGKPGVGKRAIAEGIAQRIASGDVPETIKGKMNVAGNCGWNE 240

Query: 332 -------KLAQI-----EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 391
                  K+ ++     +IILFIDE+H LIGAGA EGAIDAANILKPAL R ELQ     
Sbjct: 241 IRWRSRGKIEEVYGQSDDIILFIDEMHLLIGAGAVEGAIDAANILKPALERCELQ----- 300

Query: 392 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 410
               YRKHIE DPALERRFQPVKVPEP+V+E IQI   L +  E++
Sbjct: 301 ----YRKHIENDPALERRFQPVKVPEPTVEEAIQITTVLAKGKEVN 320

The following BLAST results are available for this feature:
BLAST of HG10008805 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038879609.10.0e+0071.81ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ... [more]
XP_008464372.10.0e+0070.98PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chl... [more]
ADN33858.10.0e+0070.55ATP-dependent clp protease [Cucumis melo subsp. melo][more]
KAA0057729.10.0e+0070.26ATP-dependent clp protease [Cucumis melo var. makuwa] >TYJ98414.1 ATP-dependent ... [more]
XP_011648878.10.0e+0070.26ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ... [more]
BLAST of HG10008805 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P315421.8e-30463.25ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ... [more]
P351001.8e-30463.01Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1[more]
P315411.4e-29863.12ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ... [more]
Q9FI561.0e-29161.88Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 ... [more]
Q7F9I15.5e-29061.29Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of HG10008805 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CMV10.0e+0070.98ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ... [more]
E5GBL80.0e+0070.55ATP-dependent clp protease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A5D3BH350.0e+0070.26ATP-dependent clp protease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1BYC40.0e+0070.36ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ... [more]
A0A6J1IA800.0e+0070.36chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147309... [more]
BLAST of HG10008805 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G50920.17.1e-29361.88CLPC homologue 1 [more]
AT3G48870.12.2e-27860.49Clp ATPase [more]
AT3G48870.22.2e-27860.49Clp ATPase [more]
AT5G51070.11.3e-9230.86Clp ATPase [more]
AT3G45450.16.6e-8958.09Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfam... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 496..523
NoneNo IPR availableGENE3D1.10.8.60coord: 465..584
e-value: 5.8E-12
score: 47.3
NoneNo IPR availableGENE3D4.10.860.10UVR domaincoord: 502..556
e-value: 6.7E-18
score: 66.1
NoneNo IPR availableGENE3D1.10.8.60coord: 637..733
e-value: 7.6E-27
score: 95.2
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 468..586
coord: 587..744
coord: 77..318
NoneNo IPR availablePANTHERPTHR11638:SF169ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B, CHLOROPLASTICcoord: 468..586
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 321..431
NoneNo IPR availablePANTHERPTHR11638:SF169ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B, CHLOROPLASTICcoord: 321..431
NoneNo IPR availablePANTHERPTHR11638:SF169ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B, CHLOROPLASTICcoord: 587..744
coord: 77..318
NoneNo IPR availableCDDcd00009AAAcoord: 261..383
e-value: 1.01762E-13
score: 67.1711
IPR019489Clp ATPase, C-terminalSMARTSM01086ClpB_D2_small_2coord: 637..727
e-value: 1.8E-30
score: 117.3
IPR019489Clp ATPase, C-terminalPFAMPF10431ClpB_D2-smallcoord: 637..717
e-value: 2.6E-23
score: 81.9
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 278..388
e-value: 2.0E-5
score: 34.0
IPR041546ClpA/ClpB, AAA lid domainPFAMPF17871AAA_lid_9coord: 465..534
e-value: 2.4E-16
score: 59.5
coord: 391..431
e-value: 1.6E-11
score: 44.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 587..635
e-value: 3.2E-6
score: 28.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 234..319
e-value: 4.3E-32
score: 113.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 320..396
e-value: 1.6E-32
score: 114.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 397..433
e-value: 6.4E-14
score: 54.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 603..723
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 238..437
IPR036628Clp, N-terminal domain superfamilyGENE3D1.10.1780.10coord: 92..230
e-value: 9.5E-52
score: 176.9
IPR036628Clp, N-terminal domain superfamilySUPERFAMILY81923Double Clp-N motifcoord: 94..204
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 283..369
e-value: 1.1E-4
score: 22.6
IPR004176Clp, repeat (R) domainPFAMPF02861Clp_Ncoord: 107..159
e-value: 1.7E-17
score: 63.2
coord: 183..224
e-value: 2.4E-13
score: 49.9
IPR004176Clp, repeat (R) domainPROSITEPS51903CLP_Rcoord: 93..236
score: 43.243809
IPR018368ClpA/B, conserved site 1PROSITEPS00870CLPAB_1coord: 343..355
IPR001943UVR domainPROSITEPS50151UVRcoord: 507..542
score: 11.806841

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008805.1HG10008805.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0005515 protein binding