HG10008794 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008794
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CASP-like protein
Location	Chr10: 26116266 .. 26116964 (+)
RNA-Seq Expression	HG10008794
Synteny	HG10008794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATATGAACGTGGTTTCAACAGTTGGGATTGTGGTTCTCCTATGTTTCCTATCCCAACTCTTCTCCTCCTATTAATACCCCTCTCACTTATTTCTTCTTCACTTAATTTTGCATCTGCATCTTCCATGGCCGACGATATGGAGGAATCGCAGCCCAAATCCAATTCCCATTCTTCTTCCCTCCACCTTTATTCTCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCTTCCACCTTACTCATCCTCTCCGCCAAGCAATCCGTCCTCATTTTTGGCATCCCTTTTGAAGCCCGATATACCTACTCCTCTGCTTTCAAATTTTTCGCTTTCGCAAACGCTATTTCATCTGCCTTCTGTTTTCTCTCCGCCTGTTTTCTTTTCATATCACGTCGGCAATTGGCCTCGGGGAATAATCATGGAACCATCAACAGAAATTACTACATCTTCTTTCTCCACGACTTGTTGATTATGTTATTGGTACTCAGCGGATGCTCTGCCGCAACCGCGATCGGTTACATAGGGAAGTACGGCAACAGCTACACAGGATGGTCTCCTATCTGTGATCATTTCGGCAAGTTTTGCAATCGGGTCACTACTTCCCTTGCCATCTCTTATTTTGCTGTTCTCTGCCTTCTCATACTCATCATCCTCTCTGCAACTGCAAATCCATCATTAACATCACGCTAA

mRNA sequence

ATGAAATATGAACGTGGTTTCAACAGTTGGGATTGTGGTTCTCCTATGTTTCCTATCCCAACTCTTCTCCTCCTATTAATACCCCTCTCACTTATTTCTTCTTCACTTAATTTTGCATCTGCATCTTCCATGGCCGACGATATGGAGGAATCGCAGCCCAAATCCAATTCCCATTCTTCTTCCCTCCACCTTTATTCTCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCTTCCACCTTACTCATCCTCTCCGCCAAGCAATCCGTCCTCATTTTTGGCATCCCTTTTGAAGCCCGATATACCTACTCCTCTGCTTTCAAATTTTTCGCTTTCGCAAACGCTATTTCATCTGCCTTCTGTTTTCTCTCCGCCTGTTTTCTTTTCATATCACGTCGGCAATTGGCCTCGGGGAATAATCATGGAACCATCAACAGAAATTACTACATCTTCTTTCTCCACGACTTGTTGATTATGTTATTGGTACTCAGCGGATGCTCTGCCGCAACCGCGATCGGTTACATAGGGAAGTACGGCAACAGCTACACAGGATGGTCTCCTATCTGTGATCATTTCGGCAAGTTTTGCAATCGGGTCACTACTTCCCTTGCCATCTCTTATTTTGCTGTTCTCTGCCTTCTCATACTCATCATCCTCTCTGCAACTGCAAATCCATCATTAACATCACGCTAA

Coding sequence (CDS)

ATGAAATATGAACGTGGTTTCAACAGTTGGGATTGTGGTTCTCCTATGTTTCCTATCCCAACTCTTCTCCTCCTATTAATACCCCTCTCACTTATTTCTTCTTCACTTAATTTTGCATCTGCATCTTCCATGGCCGACGATATGGAGGAATCGCAGCCCAAATCCAATTCCCATTCTTCTTCCCTCCACCTTTATTCTCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCTTCCACCTTACTCATCCTCTCCGCCAAGCAATCCGTCCTCATTTTTGGCATCCCTTTTGAAGCCCGATATACCTACTCCTCTGCTTTCAAATTTTTCGCTTTCGCAAACGCTATTTCATCTGCCTTCTGTTTTCTCTCCGCCTGTTTTCTTTTCATATCACGTCGGCAATTGGCCTCGGGGAATAATCATGGAACCATCAACAGAAATTACTACATCTTCTTTCTCCACGACTTGTTGATTATGTTATTGGTACTCAGCGGATGCTCTGCCGCAACCGCGATCGGTTACATAGGGAAGTACGGCAACAGCTACACAGGATGGTCTCCTATCTGTGATCATTTCGGCAAGTTTTGCAATCGGGTCACTACTTCCCTTGCCATCTCTTATTTTGCTGTTCTCTGCCTTCTCATACTCATCATCCTCTCTGCAACTGCAAATCCATCATTAACATCACGCTAA

Protein sequence

MKYERGFNSWDCGSPMFPIPTLLLLLIPLSLISSSLNFASASSMADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSATANPSLTSR

Homology

[Close]

BLAST of HG10008794 vs. NCBI nr
Match: XP_038880088.1 (CASP-like protein 1F2 [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-63
Identity = 160/240 (66.67%), Postives = 176/240 (73.33%), Query Frame = 0


Query: 16  MFPIPT-------LLLLLIPLSLISSSLNFASASS-------------MADDMEESQPKS 75
           MFP  T       L LLLIPL  + S  N     +             M D ME     S
Sbjct: 1   MFPFLTFYASNTILTLLLIPLHHLFSFPNSIPNPTYSFLLHLQFYIFPMGDAMELEPKSS 60

Query: 76  NSH---SSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFF 135
           NSH   S++LHL SQI LRALVISSTLA+TLLI+SAKQSVLI GIPF+ARYTYSSAF FF
Sbjct: 61  NSHFSSSTNLHLCSQIFLRALVISSTLAATLLIISAKQSVLILGIPFDARYTYSSAFVFF 120

Query: 136 AFANAISSAFCFLSACFLFISRRQLASG-NNHGTINRNYYIFFLHDLLIMLLVLSGCSAA 195
           A ANAIS AF FLSAC +FIS  +LASG NNHGT NRNYYIFFLHDLL+M L+L+GCSAA
Sbjct: 121 ALANAISCAFSFLSACLVFISIPRLASGNNNHGTRNRNYYIFFLHDLLMMGLLLAGCSAA 180

Query: 196 TAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSATANPSLTS 232
           TAIG +GKYGN +TGWSPICDHF KFC+RVT SLAISYF+VLCLLIL ILS  ANP LTS
Sbjct: 181 TAIGCVGKYGNDHTGWSPICDHFPKFCDRVTASLAISYFSVLCLLILTILS--ANPPLTS 238

[Close]

BLAST of HG10008794 vs. NCBI nr
Match: XP_022921629.1 (CASP-like protein 1F1 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 6.5e-53
Identity = 122/189 (64.55%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           MAD+  E + KS    ++L+L SQIILRALVISSTLA+   +++AKQSV+IFG   +ARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YSSAFKFFA ANAI+  FC LS CF+FIS RQLA GN      RN++ FF+HDLL+M L
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNR----QRNFF-FFVHDLLMMGL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           VLSGC+AATAIG++G+YGN++TGWSPICD FGKFCNR+  S+AISYFAVLCLLIL I+S 
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIIS- 180

Query: 224 TANPSLTSR 233
            ANP+   R
Sbjct: 181 -ANPTKLHR 182

[Close]

BLAST of HG10008794 vs. NCBI nr
Match: XP_022987446.1 (CASP-like protein 1F1 [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-52
Identity = 120/189 (63.49%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           M D+  E + KS    + L+L SQIILRA VISSTLA+T  +++AKQSV+IFG   +ARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YSSAFKFFA ANA++  FC LS CF+FIS RQLA G+      RN++ FF+HDLL+M L
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSR----QRNFF-FFVHDLLMMGL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           VLSGC+AATAIG++G+YGN++TGWSPICD FGKFCNR+T S+AISYFAVLCLLIL I+S 
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIIS- 180

Query: 224 TANPSLTSR 233
            ANP+   R
Sbjct: 181 -ANPTKLQR 182

[Close]

BLAST of HG10008794 vs. NCBI nr
Match: XP_022134667.1 (CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F2 [Momordica charantia])

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-51
Identity = 119/185 (64.32%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           MAD   ES   + SH  +LHL SQ ILR LVI+STLA+  L+L+AKQSV++FGIP +ARY
Sbjct: 1   MADIELESNKSNTSH--NLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YS AFKFFA ANAI+  FCFLS   LF+         +H   N+  YI FLHDLL+M+L
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVL--------SHRLHNQPNYILFLHDLLMMVL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           V SGC+A+TAIGY+GKYGNS+TGWSPICDHFGKFCNRVTTS+AISY AV+CLLIL I+SA
Sbjct: 121 VASGCAASTAIGYVGKYGNSHTGWSPICDHFGKFCNRVTTSVAISYLAVICLLILTIISA 175

Query: 224 TANPS 229
           T + S
Sbjct: 181 TKSAS 175

[Close]

BLAST of HG10008794 vs. NCBI nr
Match: XP_023516133.1 (CASP-like protein 1F1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-51
Identity = 117/181 (64.64%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 44  MADDME-ESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEAR 103
           MAD+   E + KS    ++L+L SQIILRALVISSTLA+T  + +AKQSV+IFG   +AR
Sbjct: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60

Query: 104 YTYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIML 163
           Y+YSSAFKFFA ANAI+  FC LS CF+FIS RQLA GN     +  ++ FF+HDLL+M 
Sbjct: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFS-FFFFFFVHDLLMMG 120

Query: 164 LVLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILS 223
           LV+SGC+AATAIG++G+YGN++TGWSPICD F KFCNR+T S+AISYFAVLCLLIL I+S
Sbjct: 121 LVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIIS 180

[Close]

BLAST of HG10008794 vs. ExPASy Swiss-Prot
Match: B9I3X5 (CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.5e-36
Identity = 87/181 (48.07%), Postives = 121/181 (66.85%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           MAD   +S       + ++ + +QI LR +VI+++ AST L+L+ KQ++ I G   +A Y
Sbjct: 1   MADIETKSSQNQPLKTQNIFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDANY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YS  FKF ++AN +  AF F+S  FL +  R+ ++          Y+I FLHDL +M L
Sbjct: 61  SYSPEFKFLSYANIVVGAFSFVSLLFLVLVGRRSSNPT-------YYFILFLHDLALMSL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           VL GC+AAT IG +GKYGNS+TGW  ICDHFGKFC R TTS+A SYF+++CLLIL I SA
Sbjct: 121 VLGGCAAATVIGSLGKYGNSHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITSA 174

Query: 224 T 225
           +
Sbjct: 181 S 174

[Close]

BLAST of HG10008794 vs. ExPASy Swiss-Prot
Match: B9RA90 (CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 48  MEESQPKSNS--HSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTY 107
           ME  + K NS   S  L + +QI LR + I +TLA+T ++++ KQS+        A+Y Y
Sbjct: 1   MENVEDKYNSPLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNY 60

Query: 108 SSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVL 167
           SSAFKFF  AN I+ A   +S  FL    R     +N G +    ++ FLHDLL+M LVL
Sbjct: 61  SSAFKFFVLANVIACACSVVSLLFLCALGRY---SSNPGHV----FLLFLHDLLMMSLVL 120

Query: 168 SGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 224
           +GCSAATAIG++GKYGN+ +GW PICD FG+FCNR T S+ +SY +++CLLIL + SA
Sbjct: 121 AGCSAATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSA 171

[Close]

BLAST of HG10008794 vs. ExPASy Swiss-Prot
Match: B9IFI5 (CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-32
Identity = 79/166 (47.59%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 59  SSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFFAFANAI 118
           +  L +  QI  R + I++++AS+ L++++KQ + I GI  +ARY+YS  FKF AF N +
Sbjct: 16  TQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSYSPEFKFLAFTNIV 75

Query: 119 SSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGYIG 178
              F  LS  FL +  RQ  S  NH      Y+  FLHDL +M LV+ GC+AAT +G++G
Sbjct: 76  VGCFSLLSLLFLVLVVRQ-GSNPNH------YFFLFLHDLAMMSLVVGGCAAATTVGFLG 135

Query: 179 KYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSAT 225
           K+GNS+TGW  ICD+FGKFCNR  TS+ ISY  ++CL IL I SA+
Sbjct: 136 KHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSAS 174

[Close]

BLAST of HG10008794 vs. ExPASy Swiss-Prot
Match: A7PHN8 (CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-30
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 50  ESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAF 109
           +  P   +H   L L + I LR L +++TL +  +++++KQ+V ++GI  EA+Y+YSSAF
Sbjct: 34  QQNPPLGTH--KLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSYSSAF 93

Query: 110 KFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCS 169
           KFF++ANAI+   C  S   LF       S    G+    ++  FLHDL +M LVL+GC+
Sbjct: 94  KFFSYANAIA---CGCSVLTLF----PAFSLFYRGSTPMKFFFLFLHDLCMMSLVLAGCA 153

Query: 170 AATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 224
           AATAIGY+G+YGN++ GW  ICD F ++CNR+  SL  SY A + +L+L I+SA
Sbjct: 154 AATAIGYVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSA 198

[Close]

BLAST of HG10008794 vs. ExPASy Swiss-Prot
Match: B9RH17 (CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 69/173 (39.88%), Postives = 110/173 (63.58%), Query Frame = 0


Query: 51  SQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFK 110
           SQPK       +   +Q+I R L I+  +AS   ++++ Q+V++FG+   ARY+YSSAF+
Sbjct: 25  SQPK------RIFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFR 84

Query: 111 FFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSA 170
           F   ANA+   F  LS  F+ +  R+     +   + +NYY+ FLHD+++M++++SGCSA
Sbjct: 85  FLVGANAVVCGFSVLSLIFVCLMSRR-----SEAILEKNYYL-FLHDMVMMVMMVSGCSA 144

Query: 171 ATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 224
           ATAIGY+G+YG     W+ +CD  GKFCN+   S+ ++Y A+ C + L  L+A
Sbjct: 145 ATAIGYVGRYGEKEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAA 185

[Close]

BLAST of HG10008794 vs. ExPASy TrEMBL
Match: A0A6J1E119 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-53
Identity = 122/189 (64.55%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           MAD+  E + KS    ++L+L SQIILRALVISSTLA+   +++AKQSV+IFG   +ARY
Sbjct: 1   MADNNVELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YSSAFKFFA ANAI+  FC LS CF+FIS RQLA GN      RN++ FF+HDLL+M L
Sbjct: 61  SYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNR----QRNFF-FFVHDLLMMGL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           VLSGC+AATAIG++G+YGN++TGWSPICD FGKFCNR+  S+AISYFAVLCLLIL I+S 
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIIS- 180

Query: 224 TANPSLTSR 233
            ANP+   R
Sbjct: 181 -ANPTKLHR 182

[Close]

BLAST of HG10008794 vs. ExPASy TrEMBL
Match: A0A6J1JE80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 120/189 (63.49%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           M D+  E + KS    + L+L SQIILRA VISSTLA+T  +++AKQSV+IFG   +ARY
Sbjct: 1   MPDNNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YSSAFKFFA ANA++  FC LS CF+FIS RQLA G+      RN++ FF+HDLL+M L
Sbjct: 61  SYSSAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSR----QRNFF-FFVHDLLMMGL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           VLSGC+AATAIG++G+YGN++TGWSPICD FGKFCNR+T S+AISYFAVLCLLIL I+S 
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIIS- 180

Query: 224 TANPSLTSR 233
            ANP+   R
Sbjct: 181 -ANPTKLQR 182

[Close]

BLAST of HG10008794 vs. ExPASy TrEMBL
Match: A0A6J1C084 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 5.9e-52
Identity = 119/185 (64.32%), Postives = 143/185 (77.30%), Query Frame = 0


Query: 44  MADDMEESQPKSNSHSSSLHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARY 103
           MAD   ES   + SH  +LHL SQ ILR LVI+STLA+  L+L+AKQSV++FGIP +ARY
Sbjct: 1   MADIELESNKSNTSH--NLHLCSQTILRGLVIASTLAAAWLMLTAKQSVIVFGIPLDARY 60

Query: 104 TYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLL 163
           +YS AFKFFA ANAI+  FCFLS   LF+         +H   N+  YI FLHDLL+M+L
Sbjct: 61  SYSPAFKFFALANAIACGFCFLSVLLLFVL--------SHRLHNQPNYILFLHDLLMMVL 120

Query: 164 VLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSA 223
           V SGC+A+TAIGY+GKYGNS+TGWSPICDHFGKFCNRVTTS+AISY AV+CLLIL I+SA
Sbjct: 121 VASGCAASTAIGYVGKYGNSHTGWSPICDHFGKFCNRVTTSVAISYLAVICLLILTIISA 175

Query: 224 TANPS 229
           T + S
Sbjct: 181 TKSAS 175

[Close]

BLAST of HG10008794 vs. ExPASy TrEMBL
Match: A0A5D3BHA2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00240 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 124/190 (65.26%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 41  ASSMADDME-ESQPKSNSHS----SSLHLYSQIILRALVISSTLASTLLILSAKQSVLIF 100
           A++  +DME ES+  S+ H     ++LHL SQIILR LVISSTLA+T +IL+AKQSVL+F
Sbjct: 2   ANANGNDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVF 61

Query: 101 GIPFEARYTYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFF- 160
           GIPF+ARY YSSAF+FFAFANAI+SAFCFLS CFL  S  + +S     +   N+YI F 
Sbjct: 62  GIPFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS-----STPPNFYILFF 121

Query: 161 --LHDLLIMLLVLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAV 220
             LHDLL+M LVLSGCSAATAIGY+GKYGN++ GWSPIC+HF  FCNRVT S+AISY +V
Sbjct: 122 FRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSV 181

Query: 221 LCLLILIILS 223
           +CLLIL ILS
Sbjct: 182 ICLLILTILS 186

[Close]

BLAST of HG10008794 vs. ExPASy TrEMBL
Match: A0A1S3CLB6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 124/190 (65.26%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 41  ASSMADDME-ESQPKSNSHS----SSLHLYSQIILRALVISSTLASTLLILSAKQSVLIF 100
           A++  +DME ES+  S+ H     ++LHL SQIILR LVISSTLA+T +IL+AKQSVL+F
Sbjct: 2   ANANGNDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVF 61

Query: 101 GIPFEARYTYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFF- 160
           GIPF+ARY YSSAF+FFAFANAI+SAFCFLS CFL  S  + +S     +   N+YI F 
Sbjct: 62  GIPFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPSS-----STPPNFYILFF 121

Query: 161 --LHDLLIMLLVLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAV 220
             LHDLL+M LVLSGCSAATAIGY+GKYGN++ GWSPIC+HF  FCNRVT S+AISY +V
Sbjct: 122 FRLHDLLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSV 181

Query: 221 LCLLILIILS 223
           +CLLIL ILS
Sbjct: 182 ICLLILTILS 186

[Close]

BLAST of HG10008794 vs. TAIR 10
Match: AT4G25040.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 62  LHLYSQIILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFFAFAN---AI 121
           L+L  Q+ +R L I + +AS  ++++ ++   ++GI FEA+Y+YSSAF++  +A      
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 122 SSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGYIG 181
           ++ F  + AC L + RR L             +  F  DLL  L  +S  SAA A GY+G
Sbjct: 73  ATLFTLVWAC-LAVRRRGLV------------FALFFFDLLTTLTAISAFSAAFAEGYVG 132

Query: 182 KYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSATA 226
           KYGN   GW PIC +   +C+RVT SLA+S+ + + L IL +L+A+A
Sbjct: 133 KYGNKQAGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTASA 166

[Close]

BLAST of HG10008794 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 52/167 (31.14%), Postives = 90/167 (53.89%), Query Frame = 0


Query: 68  IILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFFAFANAISSAFCFLSA 127
           ++LR     + LA+ ++++++++      I  EA+YT  +AFK+F  ANA+ S + FL  
Sbjct: 11  LVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFL-- 70

Query: 128 CFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGYIGKYGNSYTGW 187
             LF+ +  L            +    + DL++ +L+ S  SAA A+  +GK GN+  GW
Sbjct: 71  -VLFLPKESLL-----------WKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGW 130

Query: 188 SPICDHFGKFCNRVTTSLAISYFAVL--CLLILIILSATANPSLTSR 233
            PIC    KFC+++T +L   + A++   LL+L  L A  +P L  +
Sbjct: 131 LPICGQVPKFCDQITGALIAGFVALVLYVLLLLYSLHAVVDPFLLQK 163

[Close]

BLAST of HG10008794 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 59/187 (31.55%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 42  SSMADDMEESQPKSNSHSSSLHL-YSQIILRALVISSTLASTLLILSAKQSVLIFG--IP 101
           S  A+ ME S+    S   S  +   + ILR +   +T+ S +L+ +  +++  F   I 
Sbjct: 3   SGQAEIMETSKGIQKSGLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIR 62

Query: 102 FEARYTYSSAFKFFAFANAISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDL 161
           F+A Y    A  FF  ANA+ S +  LS    F+   +  + N          +  + D+
Sbjct: 63  FQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTR-------ILLIILDV 122

Query: 162 LIMLLVLSGCSAATAIGYIGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLIL 221
            ++ L+ SG S+A AI Y+   GN+ T W  IC  F  FC R++ SL  S+ A++ L++L
Sbjct: 123 AMLGLLTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILL 182

Query: 222 IILSATA 226
           I+LSA A
Sbjct: 183 ILLSAIA 182

[Close]

BLAST of HG10008794 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-12
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 67  QIILRALVISSTLASTLLILSAKQSVLI----------FGIPFEARYTYSSAFKFFAFAN 126
           ++ +R L +  T+A+  ++  AKQ+ ++            I   A+ +Y SAF +    N
Sbjct: 28  ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query: 127 AISSAFCFLSACFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGY 186
           AI+  +  +S   L ISR + +         +   +  L DL+++ L+ SG  AA+AIG 
Sbjct: 88  AIACGYTAISIAILMISRGRRS--------KKLLMVVLLGDLVMVALLFSGTGAASAIGL 147

Query: 187 IGKYGNSYTGWSPICDHFGKFCNRVTTSLAISYFAVLCLLILIILSATANP 228
           +G +GN +  W  +C  FGKFC+R   SL ++  A +  + L++L A   P
Sbjct: 148 MGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKLP 190

[Close]

BLAST of HG10008794 vs. TAIR 10
Match: AT1G03700.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 45/155 (29.03%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 68  IILRALVISSTLASTLLILSAKQSVLIFGIPFEARYTYSSAFKFFAFANAISSAFCFLSA 127
           ++LR     + L + + ++++++    F I   A+Y+  +AFK+F  ANAI + + FL  
Sbjct: 11  LVLRFAAFCAALGAVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFL-- 70

Query: 128 CFLFISRRQLASGNNHGTINRNYYIFFLHDLLIMLLVLSGCSAATAIGYIGKYGNSYTGW 187
             LF+ +  L            +    + DL++ +L+ S  SAA A+  +GK GN+  GW
Sbjct: 71  -VLFLPKESLL-----------WKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGW 130

Query: 188 SPICDHFGKFCNRVTTSLAISYFAVLCLLILIILS 223
            PIC    +FC+++T +L     A++  + L+I S
Sbjct: 131 LPICGQVPRFCDQITGALIAGLVALVLYVFLLIFS 151

The following BLAST results are available for this feature:

BLAST of HG10008794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880088.1	1.1e-63	66.67	CASP-like protein 1F2 [Benincasa hispida]	[more]
XP_022921629.1	6.5e-53	64.55	CASP-like protein 1F1 [Cucurbita moschata]	[more]
XP_022987446.1	3.2e-52	63.49	CASP-like protein 1F1 [Cucurbita maxima]	[more]
XP_022134667.1	1.2e-51	64.32	CASP-like protein 1F2 [Momordica charantia] >XP_022134668.1 CASP-like protein 1F...	[more]
XP_023516133.1	2.7e-51	64.64	CASP-like protein 1F1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10008794 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9I3X5	7.5e-36	48.07	CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 S...	[more]
B9RA90	1.7e-32	48.31	CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1	[more]
B9IFI5	5.0e-32	47.59	CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 S...	[more]
A7PHN8	4.7e-30	44.25	CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2	[more]
B9RH17	1.7e-27	39.88	CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1	[more]

BLAST of HG10008794 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E119	3.2e-53	64.55	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1	[more]
A0A6J1JE80	1.6e-52	63.49	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1	[more]
A0A6J1C084	5.9e-52	64.32	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006880 PE=3 SV=1	[more]
A0A5D3BHA2	2.3e-51	65.26	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00...	[more]
A0A1S3CLB6	2.3e-51	65.26	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1	[more]

BLAST of HG10008794 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25040.1	1.2e-20	37.72	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	1.3e-14	31.14	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.6e-12	31.55	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	4.6e-12	29.24	Uncharacterised protein family (UPF0497)	[more]
AT1G03700.1	1.0e-11	29.03	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 68..224 e-value: 2.4E-39 score: 132.6
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 66..214 e-value: 6.9E-34 score: 116.8
None	No IPR available	PANTHER	PTHR11615:SF264	CASP-LIKE PROTEIN 1F1	coord: 52..225
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 52..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008794.1	HG10008794.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003676	nucleic acid binding