HG10008721 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATGGAATCACATGATCGATATGATCCAATTGACATACCAATGTTGGTCAAAGATATCGAGATGAGACTTCAACAAATATCCAACTATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGGTAAGTATAAAGCATTTTTATGTTGATCGATTTGTATATATGGATAATTTCTATATTTTGTTTTATAATTATCTTTTTAAAAATCTTTAATTTTGTAGATTTTGAAATTGTTTTATTCTTTAACAATGGTCCTACAAAAAGACTTTGATTTTTCTTATAGTCAAACAAAAGCACTTGATCAAAATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGCAACGATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGGTAAGTATAAAGCATTTTTATGTTGATCGATTTGTATATATGAATAATTTCTATATTTTGTTTCATAATTATCTTTTTAAAAATCTTTAATTTTGTAGATTTTGAAATTGTTTTATCTTTAACAATGTTCTTACAAAAAAGACTTTGATTTTTCTTATAGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGGTAAGTATAAAGCATTTTTATGTTGATCGATTTGTATATATGAATAATTTCTATATTTTGTTTCATAATTATCTTTTTAAAAATCTTTAATTTTGTAGATTTTGAAATTGTTTTATCTTTAACAATGTTCTTACAAAAAGACTTTGATTTTTCTTATAGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGGTAAGTATAAAGCATTTTTATGTTGATCGATTTGTATATATGAATAATTTCTATATTTTGTTTCATAATTATCTTTTTAAAAATCTTTAATTTTGTAGATTTTGAAATTGTTTTATCTTTAACAATGTTCTTACAAAAAGACTTTGATTTTTCTTATAGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGGTAAGTATAAAGCATTTTTATGTTGATCGATTTGTATATATGAATAATTTCTATATTTTGTTTCATAATTATCTTTTTAAAAATCTTTAATTTTGTAGATTTTGAAATTGTTTTATCTTTAACAATGTTCTTACAAAAAGACTTTGATTTTTCTTATAGTCCAACAATGCAAATGAAAACACTTGGTCAAGATGATTCAGTTGACGAAGACACATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGTAACGATGTGATACCTTCAAATGAAGAAAAAGATTTAAGTTATGATAATGAATGGTATTGGAGTGGTCGTCAAACTTCTTCATAG ATGTCAATGGAATCACATGATCGATATGATCCAATTGACATACCAATGTTGGTCAAAGATATCGAGATGAGACTTCAACAAATATCCAACTATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCAAACAAAAGCACTTGATCAAAATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGCAACGATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAATGAAAACACTTGGTCAAGATGATTCAGTTGACGAAGACACATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGTAACGATGTGATACCTTCAAATGAAGAAAAAGATTTAAGTTATGATAATGAATGGTATTGGAGTGGTCGTCAAACTTCTTCATAG ATGTCAATGGAATCACATGATCGATATGATCCAATTGACATACCAATGTTGGTCAAAGATATCGAGATGAGACTTCAACAAATATCCAACTATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCAAACAAAAGCACTTGATCAAAATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGCAACGATGTGTCACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTCAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAACGAAAGCACTTGATCAAGATAATTTAATTGACGAAGACGCATTATTTGCAAAAGAAATCGAGATGACACTTGAACAGTGCAACGATGTGACACCTTCAAATGGAGAAAAAGATTCAAAGTATGATCATGAAATATGTCCAACAATGCAAATGAAAACACTTGGTCAAGATGATTCAGTTGACGAAGACACATTATTTGCAAAAGAAATCGAGATGGCACTTGAACAATGTAACGATGTGATACCTTCAAATGAAGAAAAAGATTTAAGTTATGATAATGAATGGTATTGGAGTGGTCGTCAAACTTCTTCATAG MSMESHDRYDPIDIPMLVKDIEMRLQQISNYVSPSNGEKDSKYDHEICQTKALDQNNSIDEDALFAKEIEMALEQCNDVSPSNGEKDSKYDHEICPTMQTKALDQDNSIDEDALFAKEIEMTLEQCNDVTPSNGEKDSKYDHEICPTMQTKALDQDNLIDEDALFAKEIEMTLEQCNDVTPSNGEKDSKYDHEICPTMQTKALDQDNLIDEDALFAKEIEMTLEQCNDVTPSNGEKDSKYDHEICPTMQMKTLGQDDSVDEDTLFAKEIEMALEQCNDVIPSNEEKDLSYDNEWYWSGRQTSS Homology
BLAST of HG10008721 vs. NCBI nr
Match: CAG2221914.1 (unnamed protein product [Mytilus edulis]) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-07 Identity = 60/216 (27.78%), Postives = 94/216 (43.52%), Query Frame = 0
BLAST of HG10008721 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]) HSP 1 Score: 62.4 bits (150), Expect = 7.8e-06 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 0
BLAST of HG10008721 vs. NCBI nr
Match: KAA0044109.1 (NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa] >TYK25028.1 NAC domain-containing protein 105-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-05 Identity = 61/191 (31.94%), Postives = 88/191 (46.07%), Query Frame = 0
BLAST of HG10008721 vs. NCBI nr
Match: MAW78109.1 (hypothetical protein [Planctomycetes bacterium]) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-04 Identity = 65/239 (27.20%), Postives = 96/239 (40.17%), Query Frame = 0
BLAST of HG10008721 vs. NCBI nr
Match: XP_023345567.1 (protein starmaker-like [Eurytemora affinis]) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-04 Identity = 60/243 (24.69%), Postives = 110/243 (45.27%), Query Frame = 0
BLAST of HG10008721 vs. ExPASy TrEMBL
Match: A0A1S3B8F1 (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.8e-06 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 0
BLAST of HG10008721 vs. ExPASy TrEMBL
Match: A0A5A7TSB0 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001480 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.4e-06 Identity = 61/191 (31.94%), Postives = 88/191 (46.07%), Query Frame = 0
BLAST of HG10008721 vs. ExPASy TrEMBL
Match: A0A2E1X718 (Uncharacterized protein OS=Planctomycetes bacterium OX=2026780 GN=CMJ95_12090 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.1e-05 Identity = 65/239 (27.20%), Postives = 96/239 (40.17%), Query Frame = 0
BLAST of HG10008721 vs. ExPASy TrEMBL
Match: A0A6J1CWV5 (NAC domain-containing protein 12-like OS=Momordica charantia OX=3673 GN=LOC111015148 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.6e-04 Identity = 44/119 (36.97%), Postives = 62/119 (52.10%), Query Frame = 0
BLAST of HG10008721 vs. ExPASy TrEMBL
Match: A0A6V7TBT2 (TRAP-like protein OS=Plasmodium vinckei OX=5860 GN=PVSEL_1300950 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.9e-04 Identity = 57/273 (20.88%), Postives = 127/273 (46.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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