HG10008659 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008659
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Location	Chr10: 24963298 .. 24963795 (-)
RNA-Seq Expression	HG10008659
Synteny	HG10008659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTACTGATGTAGCTGACTCTCTTCCTTGCGAAGCCGATAAATCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCTTGCTTTGGATCTCGCCGTGTGGCCACAGTCGGACCGTCGTGGTGGGAACGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGAGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGAGCTGGTCTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGACGACGATATCGATGATTTCAATGGTTTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

mRNA sequence

ATGGCGTTTACTGATGTAGCTGACTCTCTTCCTTGCGAAGCCGATAAATCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCTTGCTTTGGATCTCGCCGTGTGGCCACAGTCGGACCGTCGTGGTGGGAACGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGAGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGAGCTGGTCTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGACGACGATATCGATGATTTCAATGGTTTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

Coding sequence (CDS)

ATGGCGTTTACTGATGTAGCTGACTCTCTTCCTTGCGAAGCCGATAAATCCAATTCTTTGTTGCCGACCGCCAGGTGCGGTTGTTTCCGGTTATCTTGCTTTGGATCTCGCCGTGTGGCCACAGTCGGACCGTCGTGGTGGGAACGGATTAGGGCATCGCAGGTTCATAGCGAGGGGCGCTGGTGGGCGAGAGGCGTTAGGGCTCTTTTGAAGCTCCGAGAATGGTCGGAGATCGTCGCTGGACCGAGATGGAAGACTTTCATTCGCCGATTTAATCGGAATCGGAGTGGTGGTGGTGGAGCTGGTCTTAGGGCTGGGAAATTTCAATACGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGGCAGATTGGAGAATTGGACGACGATATCGATGATTTCAATGGTTTTCGGAACTTCTCTGCTCGTTACGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACCAAGGATGTTTCTGCCGTCGCGTAA

Protein sequence

MAFTDVADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA

Homology

[Close]

BLAST of HG10008659 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 155/167 (92.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MAFTDVADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MAFTDV +  PCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVHSEGR
Sbjct: 1   MAFTDVEEESPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFD 120
           WWARGVR LLKLREWSEIVAGPRWKTFIRRFNRNRSGGGG G+RAGKFQYDPLSYAMNFD
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGVRAGKFQYDPLSYAMNFD 120

Query: 121 EGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGT--KDVSAVA 166
           EGSRQIGELDDDIDDFNG+RNFSARYASIPAPLKTGGT  KDVS+VA
Sbjct: 121 EGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTIIKDVSSVA 167

[Close]

BLAST of HG10008659 vs. NCBI nr
Match: XP_008453108.1 (PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 2.1e-82
Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MAFTDV--ADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV   +S  CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS------GGGGAGLRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS      GGGG+G+RAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           LSYAMNFDEGSRQIGELDDD+DDFNG+RNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of HG10008659 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 153/175 (87.43%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MAFTDVADSLP-CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEG 60
           MAFTDV +  P C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS---------GGGGAGLRAGKFQY 120
           RWW RGVR LLKLREWSEIVAGPRWKTFIRRFNRNRS         GGGG+G+RAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           DPLSYAMNFDEGSRQIGELDDDIDDFNG+RNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of HG10008659 vs. NCBI nr
Match: KAA0057881.1 (putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MAFTDV--ADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV   +S  CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS--------GGGGAGLRAGKFQY 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS        GGGG+G+RAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           DPLSYAMNFDEGSRQIGELDDD+DDFNG+RNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of HG10008659 vs. NCBI nr
Match: KAG6589457.1 (hypothetical protein SDJN03_14880, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.4 bits (742), Expect = 9.6e-75
Identity = 138/167 (82.63%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MAFTDVADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MA+ D  +  PCEA  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFD 120
           WWARGVR +LK+REWSEIVAGPRWKTFIRRFNRNR+GGGGA  R GKF YDPLSYAMNFD
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGGGATGRPGKFHYDPLSYAMNFD 120

Query: 121 EGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGT--KDVSAVA 166
           EGSRQIGELDDD DDFNG+RNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 EGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 167

[Close]

BLAST of HG10008659 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MAFTDV--ADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV   +S  CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS------GGGGAGLRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS      GGGG+G+RAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           LSYAMNFDEGSRQIGELDDD+DDFNG+RNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of HG10008659 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MAFTDV--ADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV   +S  CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS------GGGGAGLRAGKFQYDP 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS      GGGG+G+RAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           LSYAMNFDEGSRQIGELDDD+DDFNG+RNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of HG10008659 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MAFTDV--ADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV   +S  CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS--------GGGGAGLRAGKFQY 120
           GRWWARGV+ +LKLREWSEIVAGPRWKTFIRRFNRNRS        GGGG+G+RAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           DPLSYAMNFDEGSRQIGELDDD+DDFNG+RNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of HG10008659 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 153/175 (87.43%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MAFTDVADSLP-CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEG 60
           MAFTDV +  P C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRS---------GGGGAGLRAGKFQY 120
           RWW RGVR LLKLREWSEIVAGPRWKTFIRRFNRNRS         GGGG+G+RAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGTKDVSAVA 166
           DPLSYAMNFDEGSRQIGELDDDIDDFNG+RNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of HG10008659 vs. ExPASy TrEMBL
Match: A0A6J1E188 (uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC111429865 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 138/167 (82.63%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MAFTDVADSLPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 60
           MA+ D  +  PCE D SNSLLPT RCGCFRLSC   RR   VGPSWWERIRASQVHSEGR
Sbjct: 1   MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 60

Query: 61  WWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFD 120
           WWARGVR +LK+REWSEIVAGPRWKTFIRRFNRNR+GG GAG R GKFQYDPLSYAMNFD
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAG-RPGKFQYDPLSYAMNFD 120

Query: 121 EGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKTGGT--KDVSAVA 166
           EGSRQIGELDDD DDFNG+RNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 121 EGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 166

[Close]

BLAST of HG10008659 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-25
Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 41  TVGPSWWERIRASQVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGG 100
           TV  SWW+RI  +  H E RWW   VRA LK+REWSEIVAGPRWKTFIRRFNR+   G  
Sbjct: 19  TVKSSWWQRIHRNN-HQEPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 78

Query: 101 AGLRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIP 151
               + KF+YDP+SY ++F++  +     DDD     G R+FS RYAS+P
Sbjct: 79  WD-DSDKFRYDPVSYTLSFEDEDKD----DDDEAGVGGVRSFSMRYASVP 119

[Close]

BLAST of HG10008659 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-25
Identity = 64/161 (39.75%), Postives = 89/161 (55.28%), Query Frame = 0


Query: 15  DKSNSLLPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHSEGRWWARGVRALLKL 74
           D  +  L   R  CF + C  S + +T G S WW+RI    ++  + RWW RG R   ++
Sbjct: 15  DDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWWIRGWR---RM 74

Query: 75  REWSEIVAGPRWKTFIRRFNRNRSGGGGAG------------------LRAGKFQYDPLS 134
           REWSE+VAGPRWKT+IRRF R+   GGG G                     GKF+YD LS
Sbjct: 75  REWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQGKFRYDQLS 134

Query: 135 YAMNFDEGSRQIGELDDDIDDFNGFRNFSARYASIPAPLKT 156
           Y++NFD+G+ Q G  DD+      +R++S R+A+   P+ T
Sbjct: 135 YSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of HG10008659 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 108.2 bits (269), Expect = 6.3e-24
Identity = 69/136 (50.74%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 25  RCGCFRLSCFGSRRVATVGPSWWERIRA--SQVHS-----EGRWWARGVRALLKLREWSE 84
           RC CF  S   SR    VG S W RIR      HS     E RWW   +RA LK+REWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 85  IVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDF- 144
           IVAGPRWKTFIRRFNR+   G      + KFQYDPLSY++NFD+        DD+ D++ 
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWD-ASEKFQYDPLSYSLNFDD--------DDEEDEYV 138

Query: 145 --NGFRNFSARYASIP 151
              G R+FS R+AS+P
Sbjct: 139 GLGGLRSFSTRFASVP 141

[Close]

BLAST of HG10008659 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-23
Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 15  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHSEGRWWARGVRALLKL 74
           D+ +  +   R  CF L C GS + +   G  WW+RIR   ++  + RWW  G    +K+
Sbjct: 598 DEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSG---WMKM 657

Query: 75  REWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGK-----FQYDPLSYAMNFDEGSRQIG 134
           REWSEIVAGP+WKTFIRRF RN    GG      +     F+YD  SY++NFD+G +Q G
Sbjct: 658 REWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDG-KQTG 717

Query: 135 ELDDDIDDFNGFRNFSARYASIPAPLKT 156
             +D+      +R++S R+A+   P+ T
Sbjct: 718 HFEDEFP----YRDYSMRFAAPSLPVST 737

[Close]

BLAST of HG10008659 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-06
Identity = 29/69 (42.03%), Postives = 36/69 (52.17%), Query Frame = 0


Query: 54  QVHSEGRWWARGVRALLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGAGLRAGKFQYDPL 113
           Q    G W   G   L  L+E SE +AGP+WK FIR F    S G     R   F YD  
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSF----SSGRKKMRRDVDFTYDLK 110

Query: 114 SYAMNFDEG 123
           +Y++NFD+G
Sbjct: 111 NYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of HG10008659 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878924.1	2.1e-85	92.81	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
XP_008453108.1	2.1e-82	89.02	PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putat...	[more]
XP_011657987.1	3.6e-82	87.43	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
KAA0057881.1	3.6e-82	88.00	putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]	[more]
KAG6589457.1	9.6e-75	82.63	hypothetical protein SDJN03_14880, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of HG10008659 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008659 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BK38	1.0e-82	89.02	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BVG0	1.0e-82	89.02	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]
A0A5A7UWM1	1.8e-82	88.00	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A0A0LUB2	1.8e-82	87.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A6J1E188	1.4e-74	82.63	uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC1114298...	[more]

BLAST of HG10008659 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48020.1	7.4e-25	53.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01430.1	7.4e-25	39.75	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G62865.1	6.3e-24	50.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G14890.1	4.1e-23	39.86	NHL domain-containing protein	[more]
AT5G25240.1	5.9e-06	42.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 12..162
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 12..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008659.1	HG10008659.1	mRNA