HG10008603 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008603
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription factor ILI6-like
Location	Chr10: 24502954 .. 24503362 (+)
RNA-Seq Expression	HG10008603
Synteny	HG10008603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGCAGAAGATCCAGATCTAGGCAATCAGGCAGTTCAAGAATCACTGATGACCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCCCACGCAATCTGATAAGGTGATGAAGCAAAATCATCAATTAATACTTCTCTAAATCTCTCCTCTTCTCATATATTTACTTATTCATTCGTAAGTAATTATGAATAATACACCGCTTATGTTTCTGTTCTGATACCGTGTTAAATTTATAGGTTTCAGCAGCAAAAGTGTTGCAGGAGACATGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG

mRNA sequence

ATGTCAAGCAGAAGATCCAGATCTAGGCAATCAGGCAGTTCAAGAATCACTGATGACCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCCCACGCAATCTGATAAGGTTTCAGCAGCAAAAGTGTTGCAGGAGACATGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG

Coding sequence (CDS)

ATGTCAAGCAGAAGATCCAGATCTAGGCAATCAGGCAGTTCAAGAATCACTGATGACCAAATTAATGATCTTGTTTCCAAGTTGCAACAACTTCTTCCTGAGATTCGCCCCACGCAATCTGATAAGGTTTCAGCAGCAAAAGTGTTGCAGGAGACATGCAACTACATAAGAAACTTGCATAGAGAAGTGGATGATTTAAGTGAGAGACTTTCAGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG

Protein sequence

MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

Homology

[Close]

BLAST of HG10008603 vs. NCBI nr
Match: XP_038880650.1 (transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIR TQSDKVSAAKVLQETCNYIRNLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of HG10008603 vs. NCBI nr
Match: XP_022987208.1 (transcription factor PRE3-like [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 7.0e-35
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIR +QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of HG10008603 vs. NCBI nr
Match: XP_022135424.1 (transcription factor ILI6-like [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 9.1e-35
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIR  QSDKVSAA VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of HG10008603 vs. NCBI nr
Match: XP_008453188.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 1.6e-34
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIR  QSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of HG10008603 vs. NCBI nr
Match: XP_023516930.1 (transcription factor PRE3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 2.0e-34
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSG SRITDDQINDLVSKLQQLLPEIR +QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGGSRITDDQINDLVSKLQQLLPEIRRSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of HG10008603 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.4e-31
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MSSRRSRSRQ-SGSSRITDDQINDLVSKLQQLLPEIRPT-QSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQ SG+SRI++DQINDL+ KLQQLLPE+R + +SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of HG10008603 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.4e-30
Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITD+QI+DLVSKLQ LLPE R   +D+V +++VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSD--TAQAAIIRSLLM 91
          +EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 QEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of HG10008603 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.4e-30
Identity = 74/92 (80.43%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITD+QI+DLVSKLQ LLPE R   +D+V +++VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSD--TAQAAIIRSLLM 91
          +EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 QEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of HG10008603 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 7.0e-30
Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNL 60
          MSSRR SRSRQSGSSRI+DDQI+DLVSKLQ L+PE+R  +SDKVSA+KVLQETCNYIRNL
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 90
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of HG10008603 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.1e-26
Identity = 65/92 (70.65%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RPTQSDKVSAAKVLQETCNYIRNL 60
          MSSR+SRSRQ+G+S ITD+QINDLV +L +LLPE+    +S KVSA++VLQETC+YIRNL
Sbjct: 1  MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
           +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 SKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of HG10008603 vs. ExPASy TrEMBL
Match: A0A6J1JIT1 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-35
Identity = 85/91 (93.41%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIR +QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of HG10008603 vs. ExPASy TrEMBL
Match: A0A6J1C1E4 (transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.4e-35
Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIR  QSDKVSAA VLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of HG10008603 vs. ExPASy TrEMBL
Match: A0A1S3BWE2 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.5e-35
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIR  QSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of HG10008603 vs. ExPASy TrEMBL
Match: A0A6J1E6W2 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.9e-35
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSG SRITDDQINDLVSKLQQLLPEIR +QSDKVSAAK+LQETCNYI+NLH
Sbjct: 1  MSSRRSRSRQSGGSRITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 REVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of HG10008603 vs. ExPASy TrEMBL
Match: A0A067GBS6 (BHLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g048534mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNLH 60
          MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPE+R  +SDKVSA KVLQETCNYIR+LH
Sbjct: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPELRNNRSDKVSAGKVLQETCNYIRSLH 60

Query: 61 REVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          REVDDLSERLSELLAT+DTAQAAIIRSLLMQ
Sbjct: 61 REVDDLSERLSELLATTDTAQAAIIRSLLMQ 91

[Close]

BLAST of HG10008603 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 134.4 bits (337), Expect = 4.5e-32
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MSSRRSRSRQ-SGSSRITDDQINDLVSKLQQLLPEIRPT-QSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQ SG+SRI++DQINDL+ KLQQLLPE+R + +SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of HG10008603 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 5.0e-31
Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRITDDQINDLVSKLQQLLPEIRPTQSDKVSAAKVLQETCNYIRNL 60
          MSSRR SRSRQSGSSRI+DDQI+DLVSKLQ L+PE+R  +SDKVSA+KVLQETCNYIRNL
Sbjct: 1  MSSRRSSRSRQSGSSRISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLL 90
          HREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 HREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of HG10008603 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 117.5 bits (293), Expect = 5.7e-27
Identity = 65/92 (70.65%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RPTQSDKVSAAKVLQETCNYIRNL 60
          MSSR+SRSRQ+G+S ITD+QINDLV +L +LLPE+    +S KVSA++VLQETC+YIRNL
Sbjct: 1  MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
           +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 SKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of HG10008603 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.0e-23
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEIRP-TQSDKVSAAKVLQETCNYIRNL 60
          MS+RRSR + S +SRI+DDQ+ DLVSKL+Q LPEI    +SDKVSA+KVLQETCNYIR L
Sbjct: 1  MSNRRSR-QTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKL 60

Query: 61 HREVDDLSERLSELL--ATSDTAQAAIIRSLLM 91
          HREVD+LS+RLS+LL     D+ +AA+IRSLLM
Sbjct: 61 HREVDNLSDRLSQLLDSVDEDSPEAAVIRSLLM 92

[Close]

BLAST of HG10008603 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-22
Identity = 61/93 (65.59%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRITDDQINDLVSKLQQLLPEI-RPTQSDKVSAAKVLQETCNYIRNL 60
          MS+RRSR + S + RI+D+Q+ DLVSKL+Q+LPEI +  +SDK SA+KVLQETCNYIRNL
Sbjct: 1  MSNRRSR-QSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLAT--SDTAQAAIIRSLLM 91
          +REVD+LSERLS+LL +   D+ +AA+IRSLLM
Sbjct: 61 NREVDNLSERLSQLLESVDEDSPEAAVIRSLLM 92

The following BLAST results are available for this feature:

BLAST of HG10008603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880650.1	1.3e-36	98.90	transcription factor PRE3-like [Benincasa hispida]	[more]
XP_022987208.1	7.0e-35	93.41	transcription factor PRE3-like [Cucurbita maxima]	[more]
XP_022135424.1	9.1e-35	95.60	transcription factor ILI6-like [Momordica charantia]	[more]
XP_008453188.1	1.6e-34	96.74	PREDICTED: transcription factor PRE3-like [Cucumis melo]	[more]
XP_023516930.1	2.0e-34	92.31	transcription factor PRE3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10008603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	6.4e-31	81.72	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
B8APB5	5.4e-30	80.43	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	5.4e-30	80.43	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
Q8GW32	7.0e-30	81.52	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
F4JCN9	8.1e-26	70.65	Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1	[more]

BLAST of HG10008603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JIT1	3.4e-35	93.41	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 ...	[more]
A0A6J1C1E4	4.4e-35	95.60	transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE...	[more]
A0A1S3BWE2	7.5e-35	96.74	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1	[more]
A0A6J1E6W2	9.9e-35	92.31	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=...	[more]
A0A067GBS6	2.9e-34	92.31	BHLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g048534mg PE...	[more]

BLAST of HG10008603 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	4.5e-32	81.72	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	5.0e-31	81.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	5.7e-27	70.65	BANQUO 3	[more]
AT3G28857.1	5.0e-23	67.74	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G39860.1	4.2e-22	65.59	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 1..90
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 16..76 e-value: 7.61103E-23 score: 81.1955
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 6..87 e-value: 1.1E-10 score: 43.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 19..77
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..60 e-value: 3.2E-7 score: 30.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 5..59 score: 11.616991
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008603.1	HG10008603.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity