HG10008518 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008518
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionpentatricopeptide repeat-containing protein PNM1, mitochondrial
LocationChr10: 23836103 .. 23837671 (-)
RNA-Seq ExpressionHG10008518
SyntenyHG10008518
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCATTGCCGTGTCTGCAACTTCGAAGCCTTTTTCTTCGATCTCTATCATCATCTTCTTCGAATTCCTTGAACGATTCTGCGAGGACCGTTCTCTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGGCATCATGGGGCGGCATTGAGGTTTTCTTCTCCCTTGCGACTCTCACTCTCTCATTCGCTTTCTTCCGAGTCCGGTGAGAATGACGTGGATCTGACATCGCAGTCACTTGCATCCGAGCTTCTCAAAGACCCTGATTTGGATCCTCTTCCCATTACGCAGCGCCTTCAACTTAGCTTTTCACATGTTAAACCGAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCATCGGAAGCTGGCCGGACGGTGTTAGGGTTTAATGAGTGGTTAGTATCGAAACCTGATTTTCATCACACGGATGAAACTATCTCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATGCTGTTCATGAAGTTCTTGCGAAAGGTATAGGGATCAGTGGGGCTAAAACCCTACGGTCGTCTATTGATCGGTTCGCTCGTGCTGGGCGATCCACAAAGTTGATCTCATTTTTTGAGACGATGGAGAAGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGAATGGTGGTGGAGAAGCTTTGTGAAAATGGCTTCGCGAGCCATGCAGAAAAGATGGTCAAAGACTTGGCGAATGAATTTTTCCCTGATGAAGCGATATGCGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAACTTGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGCGGGTTTGAGTTAGGGACAACGGCATATAATGCTTTGCTCGACTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTCATTCTGAAGCTGAGGAAATTCTAGTCGAACTGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGAAAAACGTCTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAATGCTGAAACGTTCCTTATTTTGATTAGAAGTTTGTATCAAGCTGCAAGAACAGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGCTATGGTGATGCACTTGATAAGAAAGCTTATTATGAATTTCTGAAGATTTTGTGTGGGATTGAGAGAATTGATCATGCTCTGATGGTTTTTGCAAAGATGAAGAAGGACGGTTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGCGCCCATAATCGTCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAAGATATGTAAAGAAGCCAAAGGTAACGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAAAAAAGCAATGCGTAGAGCATTTTGA

mRNA sequence

ATGCCGCCATTGCCGTGTCTGCAACTTCGAAGCCTTTTTCTTCGATCTCTATCATCATCTTCTTCGAATTCCTTGAACGATTCTGCGAGGACCGTTCTCTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGGCATCATGGGGCGGCATTGAGGTTTTCTTCTCCCTTGCGACTCTCACTCTCTCATTCGCTTTCTTCCGAGTCCGGTGAGAATGACGTGGATCTGACATCGCAGTCACTTGCATCCGAGCTTCTCAAAGACCCTGATTTGGATCCTCTTCCCATTACGCAGCGCCTTCAACTTAGCTTTTCACATGTTAAACCGAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCATCGGAAGCTGGCCGGACGGTGTTAGGGTTTAATGAGTGGTTAGTATCGAAACCTGATTTTCATCACACGGATGAAACTATCTCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATGCTGTTCATGAAGTTCTTGCGAAAGGTATAGGGATCAGTGGGGCTAAAACCCTACGGTCGTCTATTGATCGGTTCGCTCGTGCTGGGCGATCCACAAAGTTGATCTCATTTTTTGAGACGATGGAGAAGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGAATGGTGGTGGAGAAGCTTTGTGAAAATGGCTTCGCGAGCCATGCAGAAAAGATGGTCAAAGACTTGGCGAATGAATTTTTCCCTGATGAAGCGATATGCGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAACTTGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGCGGGTTTGAGTTAGGGACAACGGCATATAATGCTTTGCTCGACTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTCATTCTGAAGCTGAGGAAATTCTAGTCGAACTGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGAAAAACGTCTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAATGCTGAAACGTTCCTTATTTTGATTAGAAGTTTGTATCAAGCTGCAAGAACAGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGCTATGGTGATGCACTTGATAAGAAAGCTTATTATGAATTTCTGAAGATTTTGTGTGGGATTGAGAGAATTGATCATGCTCTGATGGTTTTTGCAAAGATGAAGAAGGACGGTTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGCGCCCATAATCGTCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAAGATATGTAAAGAAGCCAAAGGTAACGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAAAAAAGCAATGCGTAGAGCATTTTGA

Coding sequence (CDS)

ATGCCGCCATTGCCGTGTCTGCAACTTCGAAGCCTTTTTCTTCGATCTCTATCATCATCTTCTTCGAATTCCTTGAACGATTCTGCGAGGACCGTTCTCTTACATCGAAATTTGACGTCTCTCTTCCACCATTTCCGGCATCATGGGGCGGCATTGAGGTTTTCTTCTCCCTTGCGACTCTCACTCTCTCATTCGCTTTCTTCCGAGTCCGGTGAGAATGACGTGGATCTGACATCGCAGTCACTTGCATCCGAGCTTCTCAAAGACCCTGATTTGGATCCTCTTCCCATTACGCAGCGCCTTCAACTTAGCTTTTCACATGTTAAACCGAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCATCGGAAGCTGGCCGGACGGTGTTAGGGTTTAATGAGTGGTTAGTATCGAAACCTGATTTTCATCACACGGATGAAACTATCTCGTATTTTGTCGATTATTTTGGTCGTAGAAAGGATTTCAATGCTGTTCATGAAGTTCTTGCGAAAGGTATAGGGATCAGTGGGGCTAAAACCCTACGGTCGTCTATTGATCGGTTCGCTCGTGCTGGGCGATCCACAAAGTTGATCTCATTTTTTGAGACGATGGAGAAGAATTACGGGCTTAAGAGGGATAAAGAGTCGCTTAGAATGGTGGTGGAGAAGCTTTGTGAAAATGGCTTCGCGAGCCATGCAGAAAAGATGGTCAAAGACTTGGCGAATGAATTTTTCCCTGATGAAGCGATATGCGATACTCTGATCAAAGGATGGTGCGTTGATGAGAAACTTGATGAAGCAAAAAGGCTGGCGGGTGAGATGTACAGGGGCGGGTTTGAGTTAGGGACAACGGCATATAATGCTTTGCTCGACTGTGTTTGCAAACTTTGTAGGAAAAAGGATCCGTTTAGACTTCATTCTGAAGCTGAGGAAATTCTAGTCGAACTGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGCTGATCAATAATTTGTGCAAGATTAGAAAAACGTCTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAATGCTGAAACGTTCCTTATTTTGATTAGAAGTTTGTATCAAGCTGCAAGAACAGGAGAGGGGGATGAAATGATTGACAGGATGAGGTCTGCAGGCTATGGTGATGCACTTGATAAGAAAGCTTATTATGAATTTCTGAAGATTTTGTGTGGGATTGAGAGAATTGATCATGCTCTGATGGTTTTTGCAAAGATGAAGAAGGACGGTTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGCGCCCATAATCGTCTGGACAAAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTGCCAGTTACTCCAAAAGCATATCAGGTGGATCCAAGATATGTAAAGAAGCCAAAGGTAACGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGCGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAACCGAAAAAAGCAATGCGTAGAGCATTTTGA

Protein sequence

MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF
Homology
BLAST of HG10008518 vs. NCBI nr
Match: XP_038880042.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispida])

HSP 1 Score: 989.9 bits (2558), Expect = 8.0e-285
Identity = 495/522 (94.83%), Postives = 508/522 (97.32%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRL 60
           MPPLP LQLR+LF+RSLSS SS SLND +R VLLHRNLTSLFHHFRHH AALR+SSPL L
Sbjct: 1   MPPLPYLQLRTLFIRSLSSPSSTSLNDCSRNVLLHRNLTSLFHHFRHHEAALRYSSPLYL 60

Query: 61  SLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120
           SLSHS  SESG+ND+D TSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN
Sbjct: 61  SLSHSFFSESGDNDLDQTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120

Query: 121 LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKT 180
           LSSEAGRTVLGFNEWLVS PDFHHTDETISYF+DYFGRRKDFNAVHEVLAKG+GISGAKT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFIDYFGRRKDFNAVHEVLAKGLGISGAKT 180

Query: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDL 240
           LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLR+VVEKLCENGFASHAEKMVKDL
Sbjct: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRLVVEKLCENGFASHAEKMVKDL 240

Query: 241 ANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300
           ANEFFPDEAICDTL+KGWCVD KLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLVKGWCVDGKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 301 DPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360
           DPFRLHSEAEEILVE+DYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA
Sbjct: 301 DPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360

Query: 361 ETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVF 420
           ETFLILI+SLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHAL+VF
Sbjct: 361 ETFLILIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALVVF 420

Query: 421 AKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480
           AKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480

Query: 481 KVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           KV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF
Sbjct: 481 KVNKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 522

BLAST of HG10008518 vs. NCBI nr
Match: XP_008453300.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo] >KAA0058007.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa] >TYJ98230.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa])

HSP 1 Score: 973.8 bits (2516), Expect = 6.0e-280
Identity = 489/522 (93.68%), Postives = 502/522 (96.17%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRL 60
           MPPLP LQLRSLFLRSLSSSS+NSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL L
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 61  SLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120
           SLSHS SSESG NDVD TSQSLASELLKDPD DPLPITQRLQLSFSHVKPNPELV NTLN
Sbjct: 61  SLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 121 LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKT 180
           LSSEAGRTVLGFNEWLVS PDFHHTDETISYFVDYFGRRKDFNAVHEVLAKG+GI+G KT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKT 180

Query: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDL 240
           L SSI RFARAGR TKLISFFETMEKNYGLKRDK+SLRMVVEKL ENGF SHAEKMVKDL
Sbjct: 181 LESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDL 240

Query: 241 ANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300
           ANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 301 DPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360
           DPFRLHSEAEEILVE+D RGVPRNVETFNVLINNLCKIR+T+DAVNLFHRMGEWGCHPNA
Sbjct: 301 DPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNA 360

Query: 361 ETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVF 420
           ETFLILIRSLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERIDHAL+VF
Sbjct: 361 ETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDHALVVF 420

Query: 421 AKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480
           AKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRGVPVTPKAYQVDP+Y+KKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYMKKP 480

Query: 481 KVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           KV KV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 KVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

BLAST of HG10008518 vs. NCBI nr
Match: XP_004138218.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis sativus] >KAE8652450.1 hypothetical protein Csa_014057 [Cucumis sativus])

HSP 1 Score: 951.4 bits (2458), Expect = 3.2e-273
Identity = 479/522 (91.76%), Postives = 495/522 (94.83%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRL 60
           MPPLP LQLR+L LRSLSSSS+NSL DSARTVLLHRNLTSLFHHFRHHGAALRFSSPL L
Sbjct: 1   MPPLPYLQLRTLVLRSLSSSSTNSLKDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 61  SLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120
           SLSHS SSES  N VD TSQSLASELLKDPD DPLPITQRLQLSFSHVKPNPELV NTLN
Sbjct: 61  SLSHSFSSESVNNHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 121 LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKT 180
           LSSEAGRTVLGFNEWLVS PDFHHTDETISYFVD+FGRRKDFNAV EVLAKG+GI+G KT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVLAKGLGINGPKT 180

Query: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDL 240
           L+SSI RFARAGR TKLISFFETME NYGLKRDKESLRMVVEKLCENGF SHAEKMVKDL
Sbjct: 181 LKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGFGSHAEKMVKDL 240

Query: 241 ANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300
           ANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 301 DPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360
           DPFRL SEAEEILVE+D RGVPRNVETFNVLINNLCKIR+T+DAVNLFHRMGEWGCHPNA
Sbjct: 301 DPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNA 360

Query: 361 ETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVF 420
           ETFLILIRSLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+ ILCGIERIDHAL+VF
Sbjct: 361 ETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNILCGIERIDHALVVF 420

Query: 421 AKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480
           AKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRGVPVTPKAYQVDP+YVKKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYVKKP 480

Query: 481 KVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           K  KV KKRETLPEKMARKRRRLKQIRLSFVKKP++ MRRAF
Sbjct: 481 KDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRAF 522

BLAST of HG10008518 vs. NCBI nr
Match: XP_022966044.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima] >XP_022966052.1 pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 921.0 bits (2379), Expect = 4.6e-264
Identity = 461/529 (87.15%), Postives = 493/529 (93.19%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLS-------SSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60
           MPPLP L LR  F+RSLS       SSSS+SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120
            S   +LSLSHS  SESGENDVD +SQSLA+ELLKDPDLDPLPIT+RLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGI 180
           L+LNTLN SSEAGRTVLGFNEWL+S PDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHA 240
           GISGAKTLRS+IDRFARAGR TKL+SFFETMEKNYG KRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVE+D RGVPRNVETFNVLINNLCKIRKT+DA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           PRY KKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

BLAST of HG10008518 vs. NCBI nr
Match: XP_023531133.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 920.6 bits (2378), Expect = 6.0e-264
Identity = 461/529 (87.15%), Postives = 493/529 (93.19%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLS-------SSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60
           MPPLP L LR  F+RSLS       SSSS+SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120
            S   +LSLSHS  SESGENDVD +SQSLA+ELLKDPDLDPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGI 180
           LVLNTLNLSSEAGRTVLGFNEWL+S PDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHA 240
           GISGAKTLRS+IDRFARAGR TKL+SFFETMEKNYG KRDKES+R+VVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240

Query: 241 EKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD LI+GWCVDEK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVE+D RGVPRNVETFNVLINNLCKIRKT+DA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           PRY KKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

BLAST of HG10008518 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 4.3e-180
Identity = 326/524 (62.21%), Postives = 399/524 (76.15%), Query Frame = 0

Query: 1   MPP-LPCLQLRSLFLRS-LSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL 60
           MPP LP LQLR L LRS +SSSS N+L    R +    +   LF       +++  + P 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRII----SSKPLFSPLPPSRSSIFSTFPS 60

Query: 61  RLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNT 120
           R   S   ++ES   D +  + S + EL  +PD +   I+QR  LSFSH+ PNP+L+L T
Sbjct: 61  RF-FSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQT 120

Query: 121 LNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGA 180
           LNLS EAGR  LGFNEWL S  +F HTDET+S+FVDYFGRRKDF  + E+++K  GI+G 
Sbjct: 121 LNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG 180

Query: 181 KTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVK 240
           KTL S+IDR  RAGR  ++  FFE ME +YGLKRDKESL +VV+KLCE G AS AEKMVK
Sbjct: 181 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 240

Query: 241 DLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCR 300
           + ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDCVCKLCR
Sbjct: 241 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 300

Query: 301 KKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHP 360
           KKDPF+L  E E++L+E+++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMGEWGC P
Sbjct: 301 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 360

Query: 361 NAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALM 420
           +AET+L+LIRSLYQAAR GEGDEMID+M+SAGYG+ L+KK YY FLKILCGIER++HA+ 
Sbjct: 361 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 420

Query: 421 VFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVK 480
           VF  MK +GC+PGIKTYDLLMGK CA+N+L +AN L+ EA K+G+ V+PK Y+VDPR++K
Sbjct: 421 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 480

Query: 481 K--PKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRR 521
           K   +V    KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 KKTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of HG10008518 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-32
Identity = 96/417 (23.02%), Postives = 194/417 (46.52%), Query Frame = 0

Query: 108 VKPNPELVLNTLN--LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAV 167
           V P+  LV   +    +  + R +L F  W          D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 168 HEVLA---KGIGISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVE 227
             +L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 228 KLCENGFASHAEKMVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFEL 287
            LC  G    A  ++    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 288 GTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKT 347
               +N+LL C+C+    ++P  L  EA  I++E+    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 348 SDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYY 407
            ++  +  +M   GC P+  ++  ++R LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 408 EFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKR 467
           + + +LCG+ER++ AL +F KMK+       + YDLL+ K C     +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 468 GVPVTPKAYQVDPRYVKKPKVTKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 517
            V ++     +DP   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

BLAST of HG10008518 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.6e-31
Identity = 94/368 (25.54%), Postives = 163/368 (44.29%), Query Frame = 0

Query: 101 LQLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRK 160
           L L+ S +   P L++  L+   +AG     F  W   +P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 161 DFNAV----HEVLAKGIGISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKES 220
            F AV     E+      +   +     + RFA A    K +   + M K YGL+ D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 221 LRMVVEKLCENGFASHAEKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 280
              +++ LC+NG    A K+ +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 281 GGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLC 340
            G E     +  LL       +  D       A +++ ++  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQALC 325

Query: 341 KIRKTSD-AVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDAL 400
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 401 DKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLF 460
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 461 NEAQKRGV 464
           NE +  G+
Sbjct: 446 NEMEANGL 443

BLAST of HG10008518 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 9.3e-26
Identity = 72/258 (27.91%), Postives = 122/258 (47.29%), Query Frame = 0

Query: 208 YGLKRDKESLRMVVEKLCENGFASHAEKMVKDLANE--FFPDEAICDTLIKGWCVDEKLD 267
           +G      S+ ++V   C+ G    A   +++++N+  FFPD+   +TL+ G C    + 
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312

Query: 268 EAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNV 327
            A  +   M + G++     YN+++  +CKL   K       EA E+L ++  R    N 
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK-------EAVEVLDQMITRDCSPNT 372

Query: 328 ETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDR 387
            T+N LI+ LCK  +  +A  L   +   G  P+  TF  LI+ L          E+ + 
Sbjct: 373 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 432

Query: 388 MRSAGYGDALDKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAH 447
           MRS G     D+  Y   +  LC   ++D AL +  +M+  GC   + TY+ L+  FC  
Sbjct: 433 MRSKGCEP--DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 492

Query: 448 NRLDKANSLFNEAQKRGV 464
           N+  +A  +F+E +  GV
Sbjct: 493 NKTREAEEIFDEMEVHGV 501

BLAST of HG10008518 vs. ExPASy Swiss-Prot
Match: Q9CAM8 (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX=3702 GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-25
Identity = 86/324 (26.54%), Postives = 143/324 (44.14%), Query Frame = 0

Query: 144 HTDETISYFVDYFGRRKDFNAVHEVLAKGIGIS---GAKTLRSSIDRFARAGRSTKLISF 203
           H   T S F++ F RR   +    VLAK + +       TL S ++ +  + R +  ++ 
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 204 FETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDLANE-FFPDEAICDTLIKGWC 263
            + M +  G K D  +   ++  L  +  AS A  +V  +      PD     T++ G C
Sbjct: 176 VDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 235

Query: 264 VDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYR 323
               +D A  L  +M     +     +N ++D +CK       +R    A ++  E++ +
Sbjct: 236 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK-------YRHVEVAVDLFTEMETK 295

Query: 324 GVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEG 383
           G+  NV T+N LIN LC   + SDA  L   M E   +PN  TF  LI + ++  +  E 
Sbjct: 296 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 355

Query: 384 DEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLM 443
           +++ + M         D   Y   +   C   R+D A  +F  M    C P I+TY+ L+
Sbjct: 356 EKLHEEMIQRSIDP--DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 415

Query: 444 GKFCAHNRLDKANSLFNEAQKRGV 464
             FC   R++    LF E  +RG+
Sbjct: 416 NGFCKCKRVEDGVELFREMSQRGL 429

BLAST of HG10008518 vs. ExPASy TrEMBL
Match: A0A5A7UTF6 (Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00020 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 2.9e-280
Identity = 489/522 (93.68%), Postives = 502/522 (96.17%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRL 60
           MPPLP LQLRSLFLRSLSSSS+NSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL L
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 61  SLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120
           SLSHS SSESG NDVD TSQSLASELLKDPD DPLPITQRLQLSFSHVKPNPELV NTLN
Sbjct: 61  SLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 121 LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKT 180
           LSSEAGRTVLGFNEWLVS PDFHHTDETISYFVDYFGRRKDFNAVHEVLAKG+GI+G KT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKT 180

Query: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDL 240
           L SSI RFARAGR TKLISFFETMEKNYGLKRDK+SLRMVVEKL ENGF SHAEKMVKDL
Sbjct: 181 LESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDL 240

Query: 241 ANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300
           ANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 301 DPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360
           DPFRLHSEAEEILVE+D RGVPRNVETFNVLINNLCKIR+T+DAVNLFHRMGEWGCHPNA
Sbjct: 301 DPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNA 360

Query: 361 ETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVF 420
           ETFLILIRSLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERIDHAL+VF
Sbjct: 361 ETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDHALVVF 420

Query: 421 AKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480
           AKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRGVPVTPKAYQVDP+Y+KKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYMKKP 480

Query: 481 KVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           KV KV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 KVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

BLAST of HG10008518 vs. ExPASy TrEMBL
Match: A0A1S3BVC3 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 2.9e-280
Identity = 489/522 (93.68%), Postives = 502/522 (96.17%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLRL 60
           MPPLP LQLRSLFLRSLSSSS+NSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL L
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPLYL 60

Query: 61  SLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNTLN 120
           SLSHS SSESG NDVD TSQSLASELLKDPD DPLPITQRLQLSFSHVKPNPELV NTLN
Sbjct: 61  SLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLN 120

Query: 121 LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGAKT 180
           LSSEAGRTVLGFNEWLVS PDFHHTDETISYFVDYFGRRKDFNAVHEVLAKG+GI+G KT
Sbjct: 121 LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKT 180

Query: 181 LRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDL 240
           L SSI RFARAGR TKLISFFETMEKNYGLKRDK+SLRMVVEKL ENGF SHAEKMVKDL
Sbjct: 181 LESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDL 240

Query: 241 ANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300
           ANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK
Sbjct: 241 ANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKK 300

Query: 301 DPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNA 360
           DPFRLHSEAEEILVE+D RGVPRNVETFNVLINNLCKIR+T+DAVNLFHRMGEWGCHPNA
Sbjct: 301 DPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNA 360

Query: 361 ETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVF 420
           ETFLILIRSLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERIDHAL+VF
Sbjct: 361 ETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDHALVVF 420

Query: 421 AKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVKKP 480
           AKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRGVPVTPKAYQVDP+Y+KKP
Sbjct: 421 AKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYMKKP 480

Query: 481 KVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           KV KV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 KVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

BLAST of HG10008518 vs. ExPASy TrEMBL
Match: A0A6J1HLZ2 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465769 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 2.2e-264
Identity = 461/529 (87.15%), Postives = 493/529 (93.19%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLS-------SSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60
           MPPLP L LR  F+RSLS       SSSS+SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120
            S   +LSLSHS  SESGENDVD +SQSLA+ELLKDPDLDPLPIT+RLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGI 180
           L+LNTLN SSEAGRTVLGFNEWL+S PDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHA 240
           GISGAKTLRS+IDRFARAGR TKL+SFFETMEKNYG KRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVE+D RGVPRNVETFNVLINNLCKIRKT+DA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           PRY KKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

BLAST of HG10008518 vs. ExPASy TrEMBL
Match: A0A6J1EYW9 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440816 PE=4 SV=1)

HSP 1 Score: 919.8 bits (2376), Expect = 4.9e-264
Identity = 461/529 (87.15%), Postives = 492/529 (93.01%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLS-------SSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60
           MPPLP L LR  F+RSLS       SSSS+SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120
            S   +LSLSHS  SESGENDVD +SQSLA+ELLKDPDLDPLPIT+RLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGI 180
           LVLNTLNLSSEAGRTVLGFNEWL+S PDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHA 240
           GISGAKTLRS+IDRFARAGR TKL+SFFETMEKNYG KRDKES+RMVVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD LIKGWCVDEK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVE+D RGVPRNVETFNVLINNLCKIRKT+DA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           PRY KKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPK+ MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

BLAST of HG10008518 vs. ExPASy TrEMBL
Match: A0A6J1E592 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430060 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 460/529 (86.96%), Postives = 485/529 (91.68%), Query Frame = 0

Query: 1   MPPLPCLQLRSLFLRSLSS-------SSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60
           MPPLP LQLR + +RSL+S       SSSN LN SAR+ LLHRNLT L HHFRHHGAA R
Sbjct: 1   MPPLPYLQLRRILIRSLASSSSLSAGSSSNFLNGSARSFLLHRNLTPLIHHFRHHGAAGR 60

Query: 61  FSSPLRLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120
            S PL+LSLSHS S+ESGENDVD TSQSLA+ELLKDPDLDPLPIT+RLQ+SFSHVKPNP 
Sbjct: 61  LSYPLQLSLSHSFSTESGENDVDQTSQSLATELLKDPDLDPLPITKRLQVSFSHVKPNPV 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGI 180
           LVLNTLNLSSEAGRTVLGFNEWLVS PDFHHTDETISYFVDYFGRRKDFNA+HEVL KG+
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAIHEVLVKGL 180

Query: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHA 240
           GISGAKTLRSSIDRFARAGR TKLISFFETMEKNYGLKRDKESLR VVEKLCENG+ SHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRPTKLISFFETMEKNYGLKRDKESLRTVVEKLCENGYTSHA 240

Query: 241 EKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
            K+VKDLANEFFPDEAICD+LIKGWCV+ KLDEAKRLAGEMYRGGFELGTTAYN LLDC 
Sbjct: 241 VKIVKDLANEFFPDEAICDSLIKGWCVNGKLDEAKRLAGEMYRGGFELGTTAYNDLLDCA 300

Query: 301 CKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360
            KL RKKDPFRLHSEAEEILVE+DYRGVPRNVETFNVLINNLCKIRKT+DA++LFHRMGE
Sbjct: 301 SKLRRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDALDLFHRMGE 360

Query: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCHPNAETF+IL +SLYQAARTGEGDEMIDRMRSAG+GDALDKK YYEFL ILCGIERI
Sbjct: 361 WGCHPNAETFIILTKSLYQAARTGEGDEMIDRMRSAGHGDALDKKTYYEFLNILCGIERI 420

Query: 421 DHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480
           DHAL VF KMKK+GCEPGIKTY+LLMG  CAHN LDKANSLFNEAQKRGVPVTPKAYQVD
Sbjct: 421 DHALTVFEKMKKEGCEPGIKTYELLMGNLCAHNHLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYVKKPKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 523
           P YVKKPKV  +EKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PGYVKKPKVKNLEKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 529

BLAST of HG10008518 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 632.5 bits (1630), Expect = 3.0e-181
Identity = 326/524 (62.21%), Postives = 399/524 (76.15%), Query Frame = 0

Query: 1   MPP-LPCLQLRSLFLRS-LSSSSSNSLNDSARTVLLHRNLTSLFHHFRHHGAALRFSSPL 60
           MPP LP LQLR L LRS +SSSS N+L    R +    +   LF       +++  + P 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRII----SSKPLFSPLPPSRSSIFSTFPS 60

Query: 61  RLSLSHSLSSESGENDVDLTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPELVLNT 120
           R   S   ++ES   D +  + S + EL  +PD +   I+QR  LSFSH+ PNP+L+L T
Sbjct: 61  RF-FSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQT 120

Query: 121 LNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGIGISGA 180
           LNLS EAGR  LGFNEWL S  +F HTDET+S+FVDYFGRRKDF  + E+++K  GI+G 
Sbjct: 121 LNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGG 180

Query: 181 KTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVK 240
           KTL S+IDR  RAGR  ++  FFE ME +YGLKRDKESL +VV+KLCE G AS AEKMVK
Sbjct: 181 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVK 240

Query: 241 DLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCR 300
           + ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDCVCKLCR
Sbjct: 241 NTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 300

Query: 301 KKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHP 360
           KKDPF+L  E E++L+E+++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMGEWGC P
Sbjct: 301 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 360

Query: 361 NAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALM 420
           +AET+L+LIRSLYQAAR GEGDEMID+M+SAGYG+ L+KK YY FLKILCGIER++HA+ 
Sbjct: 361 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 420

Query: 421 VFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPRYVK 480
           VF  MK +GC+PGIKTYDLLMGK CA+N+L +AN L+ EA K+G+ V+PK Y+VDPR++K
Sbjct: 421 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK 480

Query: 481 K--PKVTKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRR 521
           K   +V    KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 KKTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of HG10008518 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-33
Identity = 96/417 (23.02%), Postives = 194/417 (46.52%), Query Frame = 0

Query: 108 VKPNPELVLNTLN--LSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRKDFNAV 167
           V P+  LV   +    +  + R +L F  W          D+  +Y +     +KD  A+
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 168 HEVLA---KGIGISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRMVVE 227
             +L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 228 KLCENGFASHAEKMVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFEL 287
            LC  G    A  ++    +    +E ++  +L+ GW V   + EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 288 GTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLCKIRKT 347
               +N+LL C+C+    ++P  L  EA  I++E+    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 348 SDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYY 407
            ++  +  +M   GC P+  ++  ++R LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 408 EFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKR 467
           + + +LCG+ER++ AL +F KMK+       + YDLL+ K C     +K   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 468 GVPVTPKAYQVDPRYVKKPKVTKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 517
            V ++     +DP   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

BLAST of HG10008518 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 4.0e-32
Identity = 94/368 (25.54%), Postives = 163/368 (44.29%), Query Frame = 0

Query: 101 LQLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLVSKPDFHHTDETISYFVDYFGRRK 160
           L L+ S +   P L++  L+   +AG     F  W   +P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 161 DFNAV----HEVLAKGIGISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKES 220
            F AV     E+      +   +     + RFA A    K +   + M K YGL+ D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 221 LRMVVEKLCENGFASHAEKMVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 280
              +++ LC+NG    A K+ +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 281 GGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNVETFNVLINNLC 340
            G E     +  LL       +  D       A +++ ++  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQALC 325

Query: 341 KIRKTSD-AVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMRSAGYGDAL 400
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 401 DKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLF 460
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 461 NEAQKRGV 464
           NE +  G+
Sbjct: 446 NEMEANGL 443

BLAST of HG10008518 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 6.6e-27
Identity = 72/258 (27.91%), Postives = 122/258 (47.29%), Query Frame = 0

Query: 208 YGLKRDKESLRMVVEKLCENGFASHAEKMVKDLANE--FFPDEAICDTLIKGWCVDEKLD 267
           +G      S+ ++V   C+ G    A   +++++N+  FFPD+   +TL+ G C    + 
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312

Query: 268 EAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYRGVPRNV 327
            A  +   M + G++     YN+++  +CKL   K       EA E+L ++  R    N 
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK-------EAVEVLDQMITRDCSPNT 372

Query: 328 ETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDR 387
            T+N LI+ LCK  +  +A  L   +   G  P+  TF  LI+ L          E+ + 
Sbjct: 373 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 432

Query: 388 MRSAGYGDALDKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLMGKFCAH 447
           MRS G     D+  Y   +  LC   ++D AL +  +M+  GC   + TY+ L+  FC  
Sbjct: 433 MRSKGCEP--DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 492

Query: 448 NRLDKANSLFNEAQKRGV 464
           N+  +A  +F+E +  GV
Sbjct: 493 NKTREAEEIFDEMEVHGV 501

BLAST of HG10008518 vs. TAIR 10
Match: AT1G63150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-26
Identity = 86/324 (26.54%), Postives = 143/324 (44.14%), Query Frame = 0

Query: 144 HTDETISYFVDYFGRRKDFNAVHEVLAKGIGIS---GAKTLRSSIDRFARAGRSTKLISF 203
           H   T S F++ F RR   +    VLAK + +       TL S ++ +  + R +  ++ 
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 204 FETMEKNYGLKRDKESLRMVVEKLCENGFASHAEKMVKDLANE-FFPDEAICDTLIKGWC 263
            + M +  G K D  +   ++  L  +  AS A  +V  +      PD     T++ G C
Sbjct: 176 VDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 235

Query: 264 VDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLHSEAEEILVELDYR 323
               +D A  L  +M     +     +N ++D +CK       +R    A ++  E++ +
Sbjct: 236 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK-------YRHVEVAVDLFTEMETK 295

Query: 324 GVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGEWGCHPNAETFLILIRSLYQAARTGEG 383
           G+  NV T+N LIN LC   + SDA  L   M E   +PN  TF  LI + ++  +  E 
Sbjct: 296 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 355

Query: 384 DEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALMVFAKMKKDGCEPGIKTYDLLM 443
           +++ + M         D   Y   +   C   R+D A  +F  M    C P I+TY+ L+
Sbjct: 356 EKLHEEMIQRSIDP--DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 415

Query: 444 GKFCAHNRLDKANSLFNEAQKRGV 464
             FC   R++    LF E  +RG+
Sbjct: 416 NGFCKCKRVEDGVELFREMSQRGL 429

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880042.18.0e-28594.83pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispi... [more]
XP_008453300.16.0e-28093.68PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu... [more]
XP_004138218.13.2e-27391.76pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis sativus... [more]
XP_022966044.14.6e-26487.15pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
XP_023531133.16.0e-26487.15pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9FME44.3e-18062.21Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... [more]
Q9FLJ62.3e-3223.02Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
P0C8A05.6e-3125.54Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Q9LFF19.3e-2627.91Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9CAM81.6e-2526.54Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7UTF62.9e-28093.68Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BVC32.9e-28093.68pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ... [more]
A0A6J1HLZ22.2e-26487.15pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
A0A6J1EYW94.9e-26487.15pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
A0A6J1E5927.9e-26286.96pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT5G60960.13.0e-18162.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G61370.11.6e-3323.02Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49730.14.0e-3225.54Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G53700.16.6e-2727.91Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G63150.11.1e-2626.54Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 391..516
e-value: 2.7E-12
score: 48.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..301
e-value: 3.5E-18
score: 67.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 302..390
e-value: 1.3E-14
score: 56.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 414..442
e-value: 9.4E-5
score: 22.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 403..431
e-value: 5.8E-4
score: 17.9
coord: 434..465
e-value: 5.9E-4
score: 17.8
coord: 327..360
e-value: 3.4E-8
score: 31.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 324..370
e-value: 7.6E-13
score: 48.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 253..278
e-value: 0.72
score: 10.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 9.492543
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..358
score: 11.947875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 247..281
score: 9.097937
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 9.678885
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 40..521
NoneNo IPR availablePANTHERPTHR47932:SF13PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIALcoord: 40..521

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008518.1HG10008518.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding