Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAACAAGAAACAAACACACAAAGACGAAGAGGGACCGAGCTCGAACGATAGCGAAGCGGTTTGAAGTCAAGAACCTGTCAATAAGGCAAAAACTTGGCCTCACAAAGAAGCTTGAAAAAACCTCAAAGCAAAAAATGGAGGTTTGTATCAAAAGAACTCTGCCTAAGATCAAATTTGGGATATCATTCATAATTCCAGACAGAATGGCTACAGAGATTGATGACAAGAAGAGGATAAGTGGATTACACCCACTGAGAATTACTAGAGTTCCATGTGGTGGGCCAATGGAGTTTCATGCCATTGTAAAAGAGGCTGAGAAAAGTTCAGCTCCATTGAAGAATCAGCAGCAGCAAGGCAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTCAATGAGTGGCATCCTCAAGTGTTTCATTTCATATCTCATAATTAA
mRNA sequence
ATGGCCAAAACAAGAAACAAACACACAAAGACGAAGAGGGACCGAGCTCGAACGATAGCGAAGCGGTTTGAAGTCAAGAACCTGTCAATAAGGCAAAAACTTGGCCTCACAAAGAAGCTTGAAAAAACCTCAAAGCAAAAAATGGAGGTTTGTATCAAAAGAACTCTGCCTAAGATCAAATTTGGGATATCATTCATAATTCCAGACAGAATGGCTACAGAGATTGATGACAAGAAGAGGATAAGTGGATTACACCCACTGAGAATTACTAGAGTTCCATGTGGTGGGCCAATGGAGTTTCATGCCATTGTAAAAGAGGCTGAGAAAAGTTCAGCTCCATTGAAGAATCAGCAGCAGCAAGGCAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTCAATGAGTGGCATCCTCAAGTGTTTCATTTCATATCTCATAATTAA
Coding sequence (CDS)
ATGGCCAAAACAAGAAACAAACACACAAAGACGAAGAGGGACCGAGCTCGAACGATAGCGAAGCGGTTTGAAGTCAAGAACCTGTCAATAAGGCAAAAACTTGGCCTCACAAAGAAGCTTGAAAAAACCTCAAAGCAAAAAATGGAGGTTTGTATCAAAAGAACTCTGCCTAAGATCAAATTTGGGATATCATTCATAATTCCAGACAGAATGGCTACAGAGATTGATGACAAGAAGAGGATAAGTGGATTACACCCACTGAGAATTACTAGAGTTCCATGTGGTGGGCCAATGGAGTTTCATGCCATTGTAAAAGAGGCTGAGAAAAGTTCAGCTCCATTGAAGAATCAGCAGCAGCAAGGCAAGCCACCAAATCCTAAAGCAGCATATCATAGGAGCTGCTTCAATGAGTGGCATCCTCAAGTGTTTCATTTCATATCTCATAATTAA
Protein sequence
MAKTRNKHTKTKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKIKFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQQGKPPNPKAAYHRSCFNEWHPQVFHFISHN
Homology
BLAST of HG10008490 vs. NCBI nr
Match:
KAG6589576.1 (hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0
Query: 1 MAKTRNKHTKTKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKIK 60
MAKTR KH+KTKR +AR IAK+F+VKNLSIRQKLGLT+K K SK+ M I+RTLP+ K
Sbjct: 1 MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAKVSKEGMGFFIRRTLPR-K 60
Query: 61 FGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQQ 120
FGISF IPDRMATEI+DKKRISGLHPLRITRVP GGPMEFHA+VKEAEK SAPLKN QQQ
Sbjct: 61 FGISFTIPDRMATEINDKKRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKN-QQQ 120
Query: 121 GKPPNPKAAYHRSCFNEWHPQVFHFIS 148
G+PPNPKAAYHRS NEWHPQVFHFIS
Sbjct: 121 GRPPNPKAAYHRSRLNEWHPQVFHFIS 145
BLAST of HG10008490 vs. NCBI nr
Match:
KGN63749.1 (hypothetical protein Csa_013996 [Cucumis sativus])
HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 120/150 (80.00%), Postives = 131/150 (87.33%), Query Frame = 0
Query: 1 MAKTRNKHTKT-KRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+ K KRDRARTIAKRF V+N + RQKL LT+KLE+TSK++MEV R L +I
Sbjct: 1 MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERMEV---RALHEI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRMATEI DKKRISGLHPLRITRVP GGPMEFH IVKEAEK SAPLKN QQ
Sbjct: 61 KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKN-QQ 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPKAAYHRSC NEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKAAYHRSCLNEWHPQVFHFISNS 145
BLAST of HG10008490 vs. NCBI nr
Match:
TYK28377.1 (hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 111/150 (74.00%), Postives = 123/150 (82.00%), Query Frame = 0
Query: 1 MAKTRNKHTK-TKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+TK KRD+ARTIAK+F V L +KLE+ SK++MEV RTL KI
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKQFRV----------LKEKLEEASKERMEV---RTLHKI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRMATEI+DKK ISGL PLRITRVPCGGPMEFH IVKEAEK SAPLKN +
Sbjct: 61 KFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKN-HK 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPK AYHRSCFNEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136
BLAST of HG10008490 vs. NCBI nr
Match:
KAA0058005.1 (hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa])
HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 109/150 (72.67%), Postives = 122/150 (81.33%), Query Frame = 0
Query: 1 MAKTRNKHTK-TKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+TK KRD+ARTIAKRF V L +KLE+ SK++MEV RT+ +I
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKRFRV----------LKEKLEEASKERMEV---RTVHQI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRM TEI+DKK ISGL PLRITRVPCGGPMEFH IVKEAEK SAPLKN +
Sbjct: 61 KFGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKN-HK 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPK AYHRSCFNEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136
BLAST of HG10008490 vs. NCBI nr
Match:
PON36990.1 (hypothetical protein PanWU01x14_323790 [Parasponia andersonii])
HSP 1 Score: 126.3 bits (316), Expect = 2.2e-25
Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0
Query: 48 MEVCIKRTLPKIKFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEA 107
M+ C R PK KFGISFI+PDR+A EI DKK I G HP+RITR+P GGP EFH +V+EA
Sbjct: 1 MDFCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEA 60
Query: 108 EKSSAPLK--NQQQQGKPPNPKAAYHRSCFNEWHPQVFH 145
EK S PLK N+ PNPK AYHRS N+WHP+VF+
Sbjct: 61 EKESRPLKKYNENVMATRPNPKKAYHRSHMNDWHPKVFY 98
BLAST of HG10008490 vs. ExPASy TrEMBL
Match:
A0A0A0LRV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 7.0e-54
Identity = 120/150 (80.00%), Postives = 131/150 (87.33%), Query Frame = 0
Query: 1 MAKTRNKHTKT-KRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+ K KRDRARTIAKRF V+N + RQKL LT+KLE+TSK++MEV R L +I
Sbjct: 1 MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERMEV---RALHEI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRMATEI DKKRISGLHPLRITRVP GGPMEFH IVKEAEK SAPLKN QQ
Sbjct: 61 KFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKN-QQ 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPKAAYHRSC NEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKAAYHRSCLNEWHPQVFHFISNS 145
BLAST of HG10008490 vs. ExPASy TrEMBL
Match:
A0A5D3DX07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00030 PE=4 SV=1)
HSP 1 Score: 203.0 bits (515), Expect = 8.8e-49
Identity = 111/150 (74.00%), Postives = 123/150 (82.00%), Query Frame = 0
Query: 1 MAKTRNKHTK-TKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+TK KRD+ARTIAK+F V L +KLE+ SK++MEV RTL KI
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKQFRV----------LKEKLEEASKERMEV---RTLHKI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRMATEI+DKK ISGL PLRITRVPCGGPMEFH IVKEAEK SAPLKN +
Sbjct: 61 KFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKN-HK 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPK AYHRSCFNEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136
BLAST of HG10008490 vs. ExPASy TrEMBL
Match:
A0A5A7UWL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003090 PE=4 SV=1)
HSP 1 Score: 200.3 bits (508), Expect = 5.7e-48
Identity = 109/150 (72.67%), Postives = 122/150 (81.33%), Query Frame = 0
Query: 1 MAKTRNKHTK-TKRDRARTIAKRFEVKNLSIRQKLGLTKKLEKTSKQKMEVCIKRTLPKI 60
MAKTRNK+TK KRD+ARTIAKRF V L +KLE+ SK++MEV RT+ +I
Sbjct: 1 MAKTRNKNTKMKKRDQARTIAKRFRV----------LKEKLEEASKERMEV---RTVHQI 60
Query: 61 KFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEAEKSSAPLKNQQQ 120
KFGISF IPDRM TEI+DKK ISGL PLRITRVPCGGPMEFH IVKEAEK SAPLKN +
Sbjct: 61 KFGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKN-HK 120
Query: 121 QGKPPNPKAAYHRSCFNEWHPQVFHFISHN 150
+GKPPNPK AYHRSCFNEWHPQVFHFIS++
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136
BLAST of HG10008490 vs. ExPASy TrEMBL
Match:
A0A2P5AKC8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0
Query: 48 MEVCIKRTLPKIKFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEA 107
M+ C R PK KFGISFI+PDR+A EI DKK I G HP+RITR+P GGP EFH +V+EA
Sbjct: 1 MDFCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEA 60
Query: 108 EKSSAPLK--NQQQQGKPPNPKAAYHRSCFNEWHPQVFH 145
EK S PLK N+ PNPK AYHRS N+WHP+VF+
Sbjct: 61 EKESRPLKKYNENVMATRPNPKKAYHRSHMNDWHPKVFY 98
BLAST of HG10008490 vs. ExPASy TrEMBL
Match:
A0A2P5F4J0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 0
Query: 48 MEVCIKRTLPKIKFGISFIIPDRMATEIDDKKRISGLHPLRITRVPCGGPMEFHAIVKEA 107
M+ C R PK KFGISFI+PDR+A EI DKK I G HP+RITR+P GGP EFH +V+EA
Sbjct: 1 MDFCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEA 60
Query: 108 EKSSAPLK--NQQQQGKPPNPKAAYHRSCFNEWHPQVFH 145
EK S PLK ++ PNPK AYHRS N+WHP+VF+
Sbjct: 61 EKESRPLKKYHENVMATGPNPKKAYHRSHMNDWHPKVFY 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6589576.1 | 1.2e-55 | 80.95 | hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN63749.1 | 1.4e-53 | 80.00 | hypothetical protein Csa_013996 [Cucumis sativus] | [more] |
TYK28377.1 | 1.8e-48 | 74.00 | hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa] | [more] |
KAA0058005.1 | 1.2e-47 | 72.67 | hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa] | [more] |
PON36990.1 | 2.2e-25 | 61.62 | hypothetical protein PanWU01x14_323790 [Parasponia andersonii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LRV9 | 7.0e-54 | 80.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1 | [more] |
A0A5D3DX07 | 8.8e-49 | 74.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UWL1 | 5.7e-48 | 72.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A2P5AKC8 | 1.0e-25 | 61.62 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE... | [more] |
A0A2P5F4J0 | 3.0e-25 | 60.61 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |