HG10008449 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008449
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOB domain-containing protein
LocationChr10: 23244122 .. 23244934 (+)
RNA-Seq ExpressionHG10008449
SyntenyHG10008449
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCAATCCGACCCTGTCTTCAATGGATCAAATCCCCCCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGGTTCTTTTACCTATTTCTACTCTGTTTTCGATTACTCTGTTTCAATTACTTATGGTGGGTTTTTCTTTTGTGGGTCCTTCAGCTATTTTTAAATCTTTGCTTTTCGAGGCGTGTGGCCGGATTGTGAATCCCATTTTTGGGTCCGCTGGATTGTTGTGGTCTGGGAGCTGGCAGCTCTGTCAGGACGCCGTCGAAGCTGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCGGCGTCGCACATGGGTCCACCCTTGAAAGGCTGTGACATCCGTCACGTCTCCAAACAACAAGGCTCCGTCTCCGATTCCGCACTTAGAAAGATCAAGACGCGGCGGCGGTTCAAACGCTCGGCGATGGCGGCCACCAAGCCGAAGCCGAAGGAGGAGGAGGCAGCGGTGGTGCCCGGGTTTAAATTCGAGGACCCGACCCGGATGGTATCGGAGCCCCAGTGTTTGAAGTTTGAGTTGGATAATTGGGAGGGTCGTGAGTCGCCGGAAAAGGACTGCGGCAGCGACGACACCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGTACAGTTGGATGCTGACGTGA

mRNA sequence

ATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCAATCCGACCCTGTCTTCAATGGATCAAATCCCCCCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGGTTCTTTTACCTATTTCTACTCTGTTTTCGATTACTCTGTTTCAATTACTTATGGTGGGTTTTTCTTTTGTGGGTCCTTCAGCTATTTTTAAATCTTTGCTTTTCGAGGCGTGTGGCCGGATTGTGAATCCCATTTTTGGGTCCGCTGGATTGTTGTGGTCTGGGAGCTGGCAGCTCTGTCAGGACGCCGTCGAAGCTGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCGGCGTCGCACATGGGTCCACCCTTGAAAGGCTGTGACATCCGTCACGTCTCCAAACAACAAGGCTCCGTCTCCGATTCCGCACTTAGAAAGATCAAGACGCGGCGGCGGTTCAAACGCTCGGCGATGGCGGCCACCAAGCCGAAGCCGAAGGAGGAGGAGGCAGCGGTGGTGCCCGGGTTTAAATTCGAGGACCCGACCCGGATGGTATCGGAGCCCCAGTGTTTGAAGTTTGAGTTGGATAATTGGGAGGGTCGTGAGTCGCCGGAAAAGGACTGCGGCAGCGACGACACCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGTACAGTTGGATGCTGACGTGA

Coding sequence (CDS)

ATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAGAGCTGCTCAATCCGACCCTGTCTTCAATGGATCAAATCCCCCCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGCCTTGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCAGGTTCTTTTACCTATTTCTACTCTGTTTTCGATTACTCTGTTTCAATTACTTATGGTGGGTTTTTCTTTTGTGGGTCCTTCAGCTATTTTTAAATCTTTGCTTTTCGAGGCGTGTGGCCGGATTGTGAATCCCATTTTTGGGTCCGCTGGATTGTTGTGGTCTGGGAGCTGGCAGCTCTGTCAGGACGCCGTCGAAGCTGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCGGCGTCGCACATGGGTCCACCCTTGAAAGGCTGTGACATCCGTCACGTCTCCAAACAACAAGGCTCCGTCTCCGATTCCGCACTTAGAAAGATCAAGACGCGGCGGCGGTTCAAACGCTCGGCGATGGCGGCCACCAAGCCGAAGCCGAAGGAGGAGGAGGCAGCGGTGGTGCCCGGGTTTAAATTCGAGGACCCGACCCGGATGGTATCGGAGCCCCAGTGTTTGAAGTTTGAGTTGGATAATTGGGAGGGTCGTGAGTCGCCGGAAAAGGACTGCGGCAGCGACGACACCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTCGGTGGGCCAGGGTGGTGACGTGGAATTGGAACTTACCTTGGGGTTTGGGTACAGTTGGATGCTGACGTGA

Protein sequence

MDAEFFAKAAVRAAQSDPVFNGSNPPNPKPTPLSSSPNSTAELALLTSSMPAPTISAQVLLPISTLFSITLFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKEEEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVGQGGDVELELTLGFGYSWMLT
Homology
BLAST of HG10008449 vs. NCBI nr
Match: KAG7021607.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.5e-93
Identity = 202/269 (75.09%), Postives = 215/269 (79.93%), Query Frame = 0

Query: 1   MDAEFFAKAAVRAAQSDPVFNGSNPPNPKPTPLSSSPNSTAELALLTSSMPAPTISAQVL 60
           MDAEFFAKAAV+AA S  VFNGS PPNPKPTP SS PNSTAELA L SSMPAP ISA V 
Sbjct: 1   MDAEFFAKAAVKAAPSGLVFNGSKPPNPKPTPPSSLPNSTAELASLISSMPAPIISALVF 60

Query: 61  LPISTLFS----ITLFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQ 120
             I   F+    I LFQL    F F+G SAIFKSLLFEACGRIVNPI+GSAGLLWSGSWQ
Sbjct: 61  HHILLCFNYSVFIALFQLPKAVFCFLGVSAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQ 120

Query: 121 LCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRF 180
           LCQDAVEAVLKGAPIL VSSETA SHMGPPLKGCDIRHVSKQQG+  DSALRKIKTRRRF
Sbjct: 121 LCQDAVEAVLKGAPILSVSSETAVSHMGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRF 180

Query: 181 KRSAMAATKPKPKEEEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDC---GS 240
           KRS  A  KP PK EE  VV  F F+DPTR+VSEP+CLKFELD+W G +S EKDC    S
Sbjct: 181 KRS--APNKPMPK-EEPVVVNEFVFDDPTRVVSEPRCLKFELDSWVGHKSQEKDCSSGSS 240

Query: 241 DDTECLSVETVEASSVGQGGDVELELTLG 263
           D+ ECLS   VE S+VGQGGDVELEL+LG
Sbjct: 241 DEAECLS---VEGSAVGQGGDVELELSLG 263

BLAST of HG10008449 vs. NCBI nr
Match: XP_038898929.1 (LOB domain-containing protein 41-like [Benincasa hispida])

HSP 1 Score: 327.8 bits (839), Expect = 8.9e-86
Identity = 171/200 (85.50%), Postives = 177/200 (88.50%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 50  LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQGS SDSALRKIKTRRRFKRS   A K KPK+
Sbjct: 110 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSASDSALRKIKTRRRFKRS---AAKLKPKQ 169

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVG 250
           E   VVP FKF+DPTR VSEP+CLKFELDNWE RESPEKDCGSDDTECLSVETVEAS VG
Sbjct: 170 EPVVVVPEFKFDDPTRTVSEPRCLKFELDNWESRESPEKDCGSDDTECLSVETVEASPVG 229

Query: 251 QGGDVELELTLGFGYSWMLT 271
           QGGDVELELTLGFG+S MLT
Sbjct: 230 QGGDVELELTLGFGHSRMLT 245

BLAST of HG10008449 vs. NCBI nr
Match: XP_004138241.2 (LOB domain-containing protein 41 [Cucumis sativus] >KGN63823.2 hypothetical protein Csa_013440 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 1.9e-80
Identity = 163/200 (81.50%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 128 LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 187

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQ S S SA+RKIKTRRRFKRS  A  KPK +E
Sbjct: 188 ILPVSSETAASHMGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTAKLKPK-EE 247

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVG 250
               VVP FKF+D T++VSEPQCLKFELDNW+GRESPEKDCGSDDTECLSVETVE     
Sbjct: 248 PSVVVVPEFKFDDQTQIVSEPQCLKFELDNWKGRESPEKDCGSDDTECLSVETVEGC--- 307

Query: 251 QGGDVELELTLGFGYSWMLT 271
           QGGDVELELTLGFG SWMLT
Sbjct: 308 QGGDVELELTLGFGQSWMLT 322

BLAST of HG10008449 vs. NCBI nr
Match: XP_008453391.1 (PREDICTED: LOB domain-containing protein 41-like [Cucumis melo] >KAA0058073.1 LOB domain-containing protein 41-like [Cucumis melo var. makuwa] >TYK28425.1 LOB domain-containing protein 41-like [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 3.7e-76
Identity = 161/201 (80.10%), Postives = 169/201 (84.08%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 50  LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQGS S SA+RKIKTRRRFKRS   A K KPKE
Sbjct: 110 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKRSG-TANKLKPKE 169

Query: 191 EEAAV-VPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSV 250
           E   V VP F F+D TR+VSEP+CLKFELDNW+G E PEK+CGSDDTECLSVETVE    
Sbjct: 170 EPGVVAVPEFIFDDQTRIVSEPRCLKFELDNWKGGEWPEKECGSDDTECLSVETVEGC-- 229

Query: 251 GQGGDVELELTLGFGYSWMLT 271
            QGGDVELELTLGFG S MLT
Sbjct: 230 -QGGDVELELTLGFGQSRMLT 245

BLAST of HG10008449 vs. NCBI nr
Match: XP_023531745.1 (LOB domain-containing protein 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 5.8e-69
Identity = 146/192 (76.04%), Postives = 159/192 (82.81%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P A+FKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 116 LVNLINAGPDHLRP-AVFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAP 175

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           IL VSSETAASHMGPPLK CDIRHVSKQQG+  DSALRKIKTRRRFKRS  A  KP P E
Sbjct: 176 ILSVSSETAASHMGPPLKDCDIRHVSKQQGAAPDSALRKIKTRRRFKRS--APNKPMP-E 235

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVG 250
           EE  VV  F F+DPTR+VSEP+CLKFELD+W G +S EKDC SD+ ECLS   VE S+VG
Sbjct: 236 EEPVVVTEFVFDDPTRVVSEPRCLKFELDSWVGHKSQEKDCSSDEAECLS---VEGSAVG 295

Query: 251 QGGDVELELTLG 263
           QGGDVELEL+LG
Sbjct: 296 QGGDVELELSLG 300

BLAST of HG10008449 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.6e-24
Identity = 77/196 (39.29%), Postives = 109/196 (55.61%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G + + P  IF+SLL EACGRIVNPI+GS GLLWSG+WQLCQDAVEAV+KG P
Sbjct: 50  LMNLINAGPNHLRP-GIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVS----DSALRKIKTRRRFKRSAMA-ATK 190
           +  ++++ A    GPPLK  DIRH+SK   S +     + L+  KTRR  + S +A   +
Sbjct: 110 VKEIATDAATIGQGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAE 169

Query: 191 PKPKEEEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVE 250
            + K +EA               S    L  + +     E   K+  S+ +E L+     
Sbjct: 170 SEGKSDEA---------------SHDSSLSHQSEIVAAHEGESKESESNVSEVLA---FS 226

Query: 251 ASSVGQGGDVELELTL 262
             +V   G+++L+LTL
Sbjct: 230 PPAVKGSGEIKLDLTL 226

BLAST of HG10008449 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.4e-22
Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  LL  G   + P AIF+SLL+EACGRIVNPI+GS GLLWSG+W LCQ AVEAV++G+P
Sbjct: 50  LMNLLNTGPDHLRP-AIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSP 109

Query: 131 ILPVSSETAASHMGPPL--KGCDIRHVSKQQGSVSDSALRKIKTRRRFK----RSAMAAT 190
           + P++ + A +   PP   K CDIRHVS +  +V   +    K  R  +     S+++  
Sbjct: 110 VTPIACDAAVTGQAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHE 169

Query: 191 KPKPKEEEAAVVP 198
            P   EE     P
Sbjct: 170 SPVSSEETTTEEP 181

BLAST of HG10008449 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17
Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G P
Sbjct: 50  LLNLIESGPDHLRP-AIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLP 109

Query: 131 I--LPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSA--------LRKIKTRR-RFKRS 182
           I   P+ S +A+  + PP +  DIRHV+K   +  DS+          K KT+  RFKR 
Sbjct: 110 ITHTPLPSASASHQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRE 169

BLAST of HG10008449 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.7e-12
Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 86  AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 135
           A+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  + P+
Sbjct: 62  ALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110

BLAST of HG10008449 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 86  AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 135
           A+F+SLL+EACGR VNP+ G+ G+LW+G+W +CQ AVE VL+G  + P+
Sbjct: 62  ALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110

BLAST of HG10008449 vs. ExPASy TrEMBL
Match: A0A0A0LPS5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 9.3e-81
Identity = 163/200 (81.50%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 50  LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQ S S SA+RKIKTRRRFKRS  A  KPK +E
Sbjct: 110 ILPVSSETAASHMGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTAKLKPK-EE 169

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVG 250
               VVP FKF+D T++VSEPQCLKFELDNW+GRESPEKDCGSDDTECLSVETVE     
Sbjct: 170 PSVVVVPEFKFDDQTQIVSEPQCLKFELDNWKGRESPEKDCGSDDTECLSVETVEGC--- 229

Query: 251 QGGDVELELTLGFGYSWMLT 271
           QGGDVELELTLGFG SWMLT
Sbjct: 230 QGGDVELELTLGFGQSWMLT 244

BLAST of HG10008449 vs. ExPASy TrEMBL
Match: A0A5A7UQD2 (LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00550 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.8e-76
Identity = 161/201 (80.10%), Postives = 169/201 (84.08%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 50  LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQGS S SA+RKIKTRRRFKRS   A K KPKE
Sbjct: 110 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKRSG-TANKLKPKE 169

Query: 191 EEAAV-VPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSV 250
           E   V VP F F+D TR+VSEP+CLKFELDNW+G E PEK+CGSDDTECLSVETVE    
Sbjct: 170 EPGVVAVPEFIFDDQTRIVSEPRCLKFELDNWKGGEWPEKECGSDDTECLSVETVEGC-- 229

Query: 251 GQGGDVELELTLGFGYSWMLT 271
            QGGDVELELTLGFG S MLT
Sbjct: 230 -QGGDVELELTLGFGQSRMLT 245

BLAST of HG10008449 vs. ExPASy TrEMBL
Match: A0A1S3BXA9 (LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.8e-76
Identity = 161/201 (80.10%), Postives = 169/201 (84.08%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 50  LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           ILPVSSETAASHMGPPLKGCDIRHVSKQQGS S SA+RKIKTRRRFKRS   A K KPKE
Sbjct: 110 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSASASAVRKIKTRRRFKRSG-TANKLKPKE 169

Query: 191 EEAAV-VPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSV 250
           E   V VP F F+D TR+VSEP+CLKFELDNW+G E PEK+CGSDDTECLSVETVE    
Sbjct: 170 EPGVVAVPEFIFDDQTRIVSEPRCLKFELDNWKGGEWPEKECGSDDTECLSVETVEGC-- 229

Query: 251 GQGGDVELELTLGFGYSWMLT 271
            QGGDVELELTLGFG S MLT
Sbjct: 230 -QGGDVELELTLGFGQSRMLT 245

BLAST of HG10008449 vs. ExPASy TrEMBL
Match: A0A6J1F4A2 (LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440342 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.3e-68
Identity = 147/194 (75.77%), Postives = 159/194 (81.96%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPI+GSAGLLWSGSWQLCQDAVEAVLKGAP
Sbjct: 116 LVNLINAGPDHLRP-AIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQDAVEAVLKGAP 175

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           IL VSSETA SHMGPPLKGCDIRHVSKQQG+  DSALRKIKTRRRFKRS  A  KP PK 
Sbjct: 176 ILSVSSETAVSHMGPPLKGCDIRHVSKQQGAAPDSALRKIKTRRRFKRS--APNKPMPK- 235

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDC--GSDDTECLSVETVEASS 250
           EE  VV  F F+DPTR+VSEP+CLKFELD+W G +S EKDC   SD+ ECLS   VE S+
Sbjct: 236 EEPVVVNEFVFDDPTRVVSEPRCLKFELDSWVGHKSQEKDCSSSSDEAECLS---VEGSA 295

Query: 251 VGQGGDVELELTLG 263
           VGQGGDVELEL+LG
Sbjct: 296 VGQGGDVELELSLG 302

BLAST of HG10008449 vs. ExPASy TrEMBL
Match: A0A6J1E692 (LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111429817 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 144/200 (72.00%), Postives = 154/200 (77.00%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVL GAP
Sbjct: 50  LLNLINAGPDHLRP-AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLNGAP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSALRKIKTRRRFKRSAMAATKPKPKE 190
           I PVS E A SHMGPPLKGCDIRHVSKQQG    S L +IK RRRFKR      KPKPK 
Sbjct: 110 IPPVSYEMATSHMGPPLKGCDIRHVSKQQG----SGLSEIKKRRRFKR------KPKPK- 169

Query: 191 EEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVEASSVG 250
           EE  ++P F  +  TR+ SEP+C  FELDN EG  SPEK CGS+DTECLSVET EASSVG
Sbjct: 170 EEPVMLPQFVVDGSTRISSEPRCFTFELDNLEGHVSPEKVCGSNDTECLSVETTEASSVG 229

Query: 251 QGGDVELELTLGFGYSWMLT 271
           QGG VELELTLGFG+  MLT
Sbjct: 230 QGGGVELELTLGFGHGRMLT 237

BLAST of HG10008449 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 77/196 (39.29%), Postives = 109/196 (55.61%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G + + P  IF+SLL EACGRIVNPI+GS GLLWSG+WQLCQDAVEAV+KG P
Sbjct: 50  LMNLINAGPNHLRP-GIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEP 109

Query: 131 ILPVSSETAASHMGPPLKGCDIRHVSKQQGSVS----DSALRKIKTRRRFKRSAMA-ATK 190
           +  ++++ A    GPPLK  DIRH+SK   S +     + L+  KTRR  + S +A   +
Sbjct: 110 VKEIATDAATIGQGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAE 169

Query: 191 PKPKEEEAAVVPGFKFEDPTRMVSEPQCLKFELDNWEGRESPEKDCGSDDTECLSVETVE 250
            + K +EA               S    L  + +     E   K+  S+ +E L+     
Sbjct: 170 SEGKSDEA---------------SHDSSLSHQSEIVAAHEGESKESESNVSEVLA---FS 226

Query: 251 ASSVGQGGDVELELTL 262
             +V   G+++L+LTL
Sbjct: 230 PPAVKGSGEIKLDLTL 226

BLAST of HG10008449 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 105.5 bits (262), Expect = 6.7e-23
Identity = 60/133 (45.11%), Postives = 80/133 (60.15%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  LL  G   + P AIF+SLL+EACGRIVNPI+GS GLLWSG+W LCQ AVEAV++G+P
Sbjct: 50  LMNLLNTGPDHLRP-AIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSP 109

Query: 131 ILPVSSETAASHMGPPL--KGCDIRHVSKQQGSVSDSALRKIKTRRRFK----RSAMAAT 190
           + P++ + A +   PP   K CDIRHVS +  +V   +    K  R  +     S+++  
Sbjct: 110 VTPIACDAAVTGQAPPFNNKLCDIRHVSSRDENVKRRSRGACKEERNVRSLSHESSLSHE 169

Query: 191 KPKPKEEEAAVVP 198
            P   EE     P
Sbjct: 170 SPVSSEETTTEEP 181

BLAST of HG10008449 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-18
Identity = 57/122 (46.72%), Postives = 76/122 (62.30%), Query Frame = 0

Query: 71  LFQLLMVGFSFVGPSAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAP 130
           L  L+  G   + P AIF+SLL+EACGRIVNP+ GS GL+WSG+W  CQ AV+AVL G P
Sbjct: 50  LLNLIESGPDHLRP-AIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLP 109

Query: 131 I--LPVSSETAASHMGPPLKGCDIRHVSKQQGSVSDSA--------LRKIKTRR-RFKRS 182
           I   P+ S +A+  + PP +  DIRHV+K   +  DS+          K KT+  RFKR 
Sbjct: 110 ITHTPLPSASASHQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRE 169

BLAST of HG10008449 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 72.8 bits (177), Expect = 4.8e-13
Identity = 29/49 (59.18%), Postives = 40/49 (81.63%), Query Frame = 0

Query: 86  AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPV 135
           A+F+SLL+EACGR VNP+ G+ GLLW+G+W +CQ AVE VL+G  + P+
Sbjct: 62  ALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110

BLAST of HG10008449 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 72.0 bits (175), Expect = 8.2e-13
Identity = 29/50 (58.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query: 86  AIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVS 136
           A+F+SLLFEACGR VNP+ G+ G+LW+ +W +CQ AVE VL+G  + P+S
Sbjct: 62  ALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7021607.11.5e-9375.09LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_038898929.18.9e-8685.50LOB domain-containing protein 41-like [Benincasa hispida][more]
XP_004138241.21.9e-8081.50LOB domain-containing protein 41 [Cucumis sativus] >KGN63823.2 hypothetical prot... [more]
XP_008453391.13.7e-7680.10PREDICTED: LOB domain-containing protein 41-like [Cucumis melo] >KAA0058073.1 LO... [more]
XP_023531745.15.8e-6976.04LOB domain-containing protein 40-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9M8862.6e-2439.29LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S... [more]
Q9ZW969.4e-2245.11LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S... [more]
Q9CA301.4e-1746.72LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S... [more]
Q9SN236.7e-1259.18LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S... [more]
Q9FN111.2e-1157.14LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0A0LPS59.3e-8181.50LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G023060 PE=3 SV... [more]
A0A5A7UQD21.8e-7680.10LOB domain-containing protein 41-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3BXA91.8e-7680.10LOB domain-containing protein 41-like OS=Cucumis melo OX=3656 GN=LOC103494123 PE... [more]
A0A6J1F4A25.3e-6875.77LOB domain-containing protein 40-like OS=Cucurbita moschata OX=3662 GN=LOC111440... [more]
A0A6J1E6921.9e-6572.00LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111429... [more]
Match NameE-valueIdentityDescription
AT3G02550.11.9e-2539.29LOB domain-containing protein 41 [more]
AT1G67100.16.7e-2345.11LOB domain-containing protein 40 [more]
AT1G68510.11.0e-1846.72LOB domain-containing protein 42 [more]
AT3G49940.14.8e-1359.18LOB domain-containing protein 38 [more]
AT4G37540.18.2e-1358.00LOB domain-containing protein 39 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..38
NoneNo IPR availablePANTHERPTHR31304:SF9LOB DOMAIN-CONTAINING PROTEIN 40coord: 85..263
NoneNo IPR availablePANTHERPTHR31304LOB DOMAIN-CONTAINING PROTEIN 38coord: 85..263

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008449.1HG10008449.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression