HG10008448 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008448
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr10: 23234542 .. 23235325 (+)
RNA-Seq Expression	HG10008448
Synteny	HG10008448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCGTCAGGTTCGTTAATCCCAATTTAAACATATTTTTGCCAGAATCAGGAACTTTCTGCCTTTAATTATCTAGATTTGAACTTGAATCTCTTTGAATTAACTTCTGATACGTGGATATGCTTCCTTGCAGCCACTCCAAGACTGGAAATTCAAGAGCAGGAGCTGAGCTTCTTGATATGATCCTCACTAAGGTTCTTATTCTTAATTACCATCTCTCTTGCTCTCTGTTTCTTTTTAGAATTAATGTCACCCTGCAAAATCTTGGTTGTTTATGTTGATTGATTACATATGTCTCTTGTGTATGAGATTGAAGAGCTACGACTACCAACAATCTTATGAATGTGGGTTGTGTTTATATCATAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGTAACAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGTGCACGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

mRNA sequence

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCGTCAGCCACTCCAAGACTGGAAATTCAAGAGCAGGAGCTGAGCTTCTTGATATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGTAACAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGTGCACGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

Coding sequence (CDS)

ATGAACAGGTGGGTTTACGAGCAGAACGCCATGGCTGCCTGCCAAGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTCTTCAAACCCCTCCTGATAATGACCCCATCAGAGCCTATAGATGGCCCGTCAGCCACTCCAAGACTGGAAATTCAAGAGCAGGAGCTGAGCTTCTTGATATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTCCAAGATGAGCAATTTGGCAATGGTAACAACAATATCTACCAACTTTGTGAAGGGCCACCATCTCCATCAACCCGTAAAGGAGGATGTGCACGAACGAAATTCGGGCATCGACCTGCAGCAGTCCGAATCGAAGGATTCGACTGTCTCAACCACGATGCTCGAAATTGCAGCATTTCTGCTGTGGCTTAG

Protein sequence

MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGAELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPPSPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA

Homology

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BLAST of HG10008448 vs. NCBI nr
Match: XP_038878157.1 (uncharacterized protein LOC120070307 [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 4.1e-86
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWP+SHS+TGNSRAGA
Sbjct: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPISHSRTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLA+SPP FWGSPPSRASNPLVQDEQFGNG NNIYQLCEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPSFWGSPPSRASNPLVQDEQFGNG-NNIYQLCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCAR KFGHRPAAVRIEGFDCLNHD+RNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNHDSRNCSISAVA 161

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BLAST of HG10008448 vs. NCBI nr
Match: XP_004138242.1 (uncharacterized protein LOC101219468 [Cucumis sativus] >KGN63819.1 hypothetical protein Csa_013662 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84
Identity = 152/162 (93.83%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MNRWVYEQNAMAACQEMRMESVVCPKPRRLV QT PDNDPI AYRWP+SHSKTGNSRAGA
Sbjct: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPIPAYRWPISHSKTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPST KGGCAR KFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTHKGGCARAKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

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BLAST of HG10008448 vs. NCBI nr
Match: XP_008453392.1 (PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 uncharacterized protein E6C27_scaffold274G003810 [Cucumis melo var. makuwa] >TYK28426.1 uncharacterized protein E5676_scaffold629G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 5.0e-84
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           M+RWVYEQNAMAACQEMRMESVVCPKPRRLV QT PDNDPI AYRWPVSH  TGNSRAGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCARTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

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BLAST of HG10008448 vs. NCBI nr
Match: XP_022933584.1 (uncharacterized protein LOC111440968 [Cucurbita moschata] >KAG7021608.1 hypothetical protein SDJN02_15334 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 144/162 (88.89%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MN+WVYEQNAMAACQEMRMESVVCPKPRRLVLQTP DNDPIRA+RWP+SH+KTGNS+AGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPNDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           ELLDMILTKESYGE +S QL +SPPFFWGSPPSRASNPLVQDEQFGN  NN+YQ  EGPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGN-RNNMYQASEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCAR KFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

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BLAST of HG10008448 vs. NCBI nr
Match: XP_022134608.1 (uncharacterized protein LOC111006835 [Momordica charantia])

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79
Identity = 148/163 (90.80%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MNRWVYEQNAMAACQEMR ESVVCPKPRRLVLQT PDNDPIRA+RWP++H KTGNS+AGA
Sbjct: 1   MNRWVYEQNAMAACQEMRTESVVCPKPRRLVLQT-PDNDPIRAHRWPLNHPKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCE-GP 120
           ELLDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNP+VQDEQFGNGNN  YQLCE GP
Sbjct: 61  ELLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPVVQDEQFGNGNNT-YQLCEGGP 120

Query: 121 PSPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           PSPSTRKGGCAR KFGHRPAAVRIEGFDCL  DARNCSISAVA
Sbjct: 121 PSPSTRKGGCARMKFGHRPAAVRIEGFDCLGRDARNCSISAVA 161

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BLAST of HG10008448 vs. ExPASy TrEMBL
Match: A0A0A0LS24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023070 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.9e-85
Identity = 152/162 (93.83%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MNRWVYEQNAMAACQEMRMESVVCPKPRRLV QT PDNDPI AYRWP+SHSKTGNSRAGA
Sbjct: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPIPAYRWPISHSKTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPST KGGCAR KFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTHKGGCARAKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of HG10008448 vs. ExPASy TrEMBL
Match: A0A5A7USD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00560 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           M+RWVYEQNAMAACQEMRMESVVCPKPRRLV QT PDNDPI AYRWPVSH  TGNSRAGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCARTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of HG10008448 vs. ExPASy TrEMBL
Match: A0A1S3BVK5 (uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.4e-84
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           M+RWVYEQNAMAACQEMRMESVVCPKPRRLV QT PDNDPI AYRWPVSH  TGNSRAGA
Sbjct: 1   MSRWVYEQNAMAACQEMRMESVVCPKPRRLVFQTLPDNDPITAYRWPVSHPNTGNSRAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           E LDMILTKESYGENFSHQLA+SPPFFWGSPPSRASNPLVQDEQFGNGNN IYQ CEGPP
Sbjct: 61  EFLDMILTKESYGENFSHQLATSPPFFWGSPPSRASNPLVQDEQFGNGNNTIYQPCEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCARTKFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNRDARNCSISAVA 162

[Close]

BLAST of HG10008448 vs. ExPASy TrEMBL
Match: A0A6J1F062 (uncharacterized protein LOC111440968 OS=Cucurbita moschata OX=3662 GN=LOC111440968 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.0e-79
Identity = 144/162 (88.89%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MN+WVYEQNAMAACQEMRMESVVCPKPRRLVLQTP DNDPIRA+RWP+SH+KTGNS+AGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPNDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           ELLDMILTKESYGE +S QL +SPPFFWGSPPSRASNPLVQDEQFGN  NN+YQ  EGPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGN-RNNMYQASEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCAR KFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of HG10008448 vs. ExPASy TrEMBL
Match: A0A6J1HNB7 (uncharacterized protein LOC111465166 OS=Cucurbita maxima OX=3661 GN=LOC111465166 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 144/162 (88.89%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTGNSRAGA 60
           MN+WVYEQNAMAACQEMRMESVVCPKPRRLVLQTP DNDPIRA+RWP+SH+KTGNS+AGA
Sbjct: 1   MNKWVYEQNAMAACQEMRMESVVCPKPRRLVLQTPYDNDPIRAHRWPISHTKTGNSKAGA 60

Query: 61  ELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQLCEGPP 120
           ELLDMILTKESYGE +S QL +SPPFFWGSPPSRASNPLVQDEQFGN  NN+YQ  EGPP
Sbjct: 61  ELLDMILTKESYGETYSQQLGTSPPFFWGSPPSRASNPLVQDEQFGN-RNNMYQASEGPP 120

Query: 121 SPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
           SPSTRKGGCAR KFGHRPAAVRIEGFDCLN DARNCSISAVA
Sbjct: 121 SPSTRKGGCARMKFGHRPAAVRIEGFDCLNRDARNCSISAVA 161

[Close]

BLAST of HG10008448 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 4.1e-28
Identity = 79/176 (44.89%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMR---------MESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHS 60
           MN    +QNA  + +E R         ++SVVCPKPRR        N+ IR +R   S S
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRA-------NNVIRPFRLHFSLS 60

Query: 61  KTG---NSRAGAELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNG 120
                 +S+AG +LLD+   KES         + SPPFF GSPPSRA+NPL QD +FG+ 
Sbjct: 61  GADDVCDSKAGEDLLDIFRRKESVS-------SRSPPFFLGSPPSRAANPLAQDARFGDE 120

Query: 121 NNNIYQLCEGP--PSPSTRKGGCARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
             N       P  PS S  K GC R KFG +PA VR+EGFDCLN D  N SI A+A
Sbjct: 121 KLNTVSPSLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]

BLAST of HG10008448 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27
Identity = 80/182 (43.96%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEM----RMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHSKTG-- 60
           MN    +QNA  + +EM    R + VVCPKPRR+ L     N+ IR  R  +S +     
Sbjct: 67  MNHCNLQQNAFMSREEMMGFDRKDLVVCPKPRRVGLLA---NNVIRPLRLHMSQAAADLC 126

Query: 61  NSRAGAELLDMILTKESYGENFSHQLASSPPFFWGSPPSRASNPLVQDEQFGNGNNNIYQ 120
           +S+AGAELL++I  KE  G      L+SSPP+F GSPPSRA+NPL QD +F +   N   
Sbjct: 127 DSKAGAELLEIIRRKEDNG-TIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPIS 186

Query: 121 ---------LCEGPPSPSTRKG-----GCARTKFGHRPAAVRIEGFDCLNHDARNCSISA 163
                       G PSPS+        GC R KFG    AVR+EGFDCLN D +N SI A
Sbjct: 187 PNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPA 244

[Close]

BLAST of HG10008448 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 78/185 (42.16%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 1   MNRWVYEQNAMAACQEMRMES----------VVCPKPRRLVLQTPPDNDPIRAYRWPVSH 60
           MN +  + NA AA  ++R  S          VVCPKPRR+ L+    + P R+ R   SH
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRN-NHHHPSRSLRCYFSH 60

Query: 61  S-KTGNSRAGAELLDMILTKESYG-ENFSHQLASSP-PFFWGSPPSRASNPLVQDEQFGN 120
             +   S+A  ++LD+ILTK+ YG E  + Q+  SP PF  GSPPSR +NPL QD +F +
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFRD 120

Query: 121 GNNNIYQL---------CEGPPSPSTRKGGC-ARTKFGHRPAAVRIEGFDCLNHDARNCS 163
              ++  +            P S S RKGGC  R  FG+ P  VR+EGFDCL+ D+RNCS
Sbjct: 121 EIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSP-KVRVEGFDCLDRDSRNCS 180

[Close]

BLAST of HG10008448 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 60/170 (35.29%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 6   YEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHS-KTGNSRAGAELLD 65
           +E+    A    R ++V+CPKPRR+      ++   R+ RW ++H  +   S +G+E+LD
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRRV---GALNHHSSRSLRWQLNHQMELCESNSGSEILD 71

Query: 66  MILTKESYG---ENFSHQLASSPPFFWGSPPSRASNPLVQDEQF-------GNGNNNIYQ 125
            ILTK   G   ++ +  + + P FF GSPPSR SNPL +D  F        + + +  +
Sbjct: 72  FILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVASPSPSTPR 131

Query: 126 LCEGPPSPSTRKGGC--ARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
             +  P  S R G C  A T FG+ P  VR+ GFDC +  + N SIS +A
Sbjct: 132 ATKPQPPSSPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

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BLAST of HG10008448 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 60/170 (35.29%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 6   YEQNAMAACQEMRMESVVCPKPRRLVLQTPPDNDPIRAYRWPVSHS-KTGNSRAGAELLD 65
           +E+    A    R ++V+CPKPRR+      ++   R+ RW ++H  +   S +G+E+LD
Sbjct: 12  FEEMRRNAAVSDRRDAVICPKPRRV---GALNHHSSRSLRWQLNHQMELCESNSGSEILD 71

Query: 66  MILTKESYG---ENFSHQLASSPPFFWGSPPSRASNPLVQDEQF-------GNGNNNIYQ 125
            ILTK   G   ++ +  + + P FF GSPPSR SNPL +D  F        + + +  +
Sbjct: 72  FILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREELLMVASPSPSTPR 131

Query: 126 LCEGPPSPSTRKGGC--ARTKFGHRPAAVRIEGFDCLNHDARNCSISAVA 163
             +  P  S R G C  A T FG+ P  VR+ GFDC +  + N SIS +A
Sbjct: 132 ATKPQPPSSPRNGSCVMAATSFGNNP-VVRVVGFDC-DRRSSNRSISTLA 176

The following BLAST results are available for this feature:

BLAST of HG10008448 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878157.1	4.1e-86	95.06	uncharacterized protein LOC120070307 [Benincasa hispida]	[more]
XP_004138242.1	1.0e-84	93.83	uncharacterized protein LOC101219468 [Cucumis sativus] >KGN63819.1 hypothetical ...	[more]
XP_008453392.1	5.0e-84	93.21	PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo] >KAA0058074.1 unc...	[more]
XP_022933584.1	2.2e-79	88.89	uncharacterized protein LOC111440968 [Cucurbita moschata] >KAG7021608.1 hypothet...	[more]
XP_022134608.1	2.8e-79	90.80	uncharacterized protein LOC111006835 [Momordica charantia]	[more]

BLAST of HG10008448 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008448 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS24	4.9e-85	93.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023070 PE=4 SV=1	[more]
A0A5A7USD0	2.4e-84	93.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BVK5	2.4e-84	93.21	uncharacterized protein LOC103494124 OS=Cucumis melo OX=3656 GN=LOC103494124 PE=...	[more]
A0A6J1F062	1.0e-79	88.89	uncharacterized protein LOC111440968 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A6J1HNB7	1.4e-79	88.89	uncharacterized protein LOC111465166 OS=Cucurbita maxima OX=3661 GN=LOC111465166...	[more]

BLAST of HG10008448 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02555.1	4.1e-28	44.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	6.0e-27	43.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G68490.1	1.3e-26	42.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	4.3e-17	35.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	4.3e-17	35.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..162
None	No IPR available	PANTHER	PTHR33384:SF22	SUBFAMILY NOT NAMED	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008448.1	HG10008448.1	mRNA