HG10008393 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008393
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ras-related protein RABA6a-like
Location	Chr10: 22808302 .. 22813393 (+)
RNA-Seq Expression	HG10008393
Synteny	HG10008393

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACAATCGGCGTGGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGCACACCGCCGGCCAAGAAAGGTCGATCTTCTTCTCCCTTCTTCTTCTTCTAGATCTGCAACAATCTGAAAACAAGATTTTCGATCAAAAAATATATATAGGAGACAATTTTAAAAATAGAAAAATAAGGAAATTATCTTTTATATAGTAAAATTTTTAGATAATTGTGATAGACGGTGATAGATGTCTATTAAATTCTATTAATAATAGAAATGATAAAAGTCTATAACTGACCGATAAAGTCTATCGATATCAGTATTTTTTTATTATTCTCTGTAAATAGTTGGACATTTTTTCTATGTAAAAATTTTCCTAAATATATATTTATTTATTGACATTTTCAAAAATTAGATTTCAATTTAAACAGTTATTTAAGATGTATTTACTAATATATTTATAAATCATTAAACTAGTTAGAGTTAGTTTGTCATATAAGATTAACTATAAATTATTATTAATTTATTTGTAATACATTATCTAATATATATTTTAATTTAAAAGATAAATAAATTGAATGTTGTTTTTATATATTTTTCTGAAAATTTAAAAGCATAAAATATAATATACTTTTTAGTATGAGAATTACGAAGATAGGAGATTGAAGTTTATTTTCTATAGAAAAAAATCTCGGCTTATCTAACCTCACTTTAACTATTCTTATACTCGAGTTAATTCTTTGAATATGAGCATTTAATTTAATTTGTGTGAGTAATTTTTTTCGAGCATATTACACTAATACAGGTATGATATGGATAATATTCTTTAAAAAGAATTGGTGAATATTCTAACATTCTTAAAGAGATGTTTATTAAAATAAAGAAAAGATCTCTCGATTAAAAATACATGCCTTAAGTAATTGGATTATGCCTGCGTTGACGGAATTCAATATTTTTGACACATGTAGTAATTTTCTTTAAATCGAGGATGAAATTTAACCAAATATGATTTTTTTTTTCAAATTCCAATAAATATTTGAAATTATTTCAGGAATATATTAATATAATATTTGTTAAGTAGATTATAAATCATAAACGAGTTATTTTCCCTTAAAAATCTATTATTCCTTTCGATCCTTTTATAAATGGGGTTTTAATTTTTCAAAAAAAAAAAAAATTATGAGAATTTGGACATGGTCTTTATCAGTTATGGGTGTTCAAAAAATTCGATGACCCGAAAAACTGATCAACGCAACCCAATCTGACCCATACAGTTTGAGTTGAATTAGGTTCAAATAAATAAAAATATTATGGGTTGAGTTGGTTTATGGGTTCACATAAAATAAACTCAAACCAATCCGAACTAACTCGAATTTATTAGTAATTTTAAAATGTATATTTTTTTTTACTTATGATGTTTTATTTAATTTTTCGAATTTATTAGTAATTTTAAAATGTATATTTTTTTTTACTTATGATGTTTTATTTAATTTTATGTTTTTTTTTATATATTTTTTCTGCAACAACTCTAAAAATAATTTTTTTAGTACTTTGGAAAGAAAAAATTCATAATATAAATTGAAACTAAGTTGTTAATTCTAATTCGATATGCGAAAATAATTAAATAAATTTTTTTTTACATATTAACACTTTACTTCTTTTTAAAACAAAAATTTAAATAAATAATCAGAATAACCCGAACCAACTCAACCCAAATGTTTCGTGTTTGGGTTAGGTTGAGTTCATTTTATAATAAGGGTTATTTGGGTTGAAGAGATTTACAATCCGAACAATTAAATTGAGTTGTTGGGTTAAAAAAATCCTTCAACCTAACTCAACTTACAGACACCCCTATTATTAATTCAACCATTTAGCTTAAAAAGTTAAGATGATAAATATTCATCTAGGGTTTTCAGCCCCAATAATGATCAAACTTATTAGGTCAAAGTTTTGGATTAAAAAGAGAGGAAATTTTGATCTTTTTTGAGGGACCCATAAACCTAGAAAGAGAAATTAGTCTTGTCCTCTAGTGATTGATTGAAGGCTAATATGTCTTTAAATTAAACCAGACATTCCCATCAATGAAAAAGTTTTAAGGAATATTGCCTCTAAATTTATAGTAATTATTATTATTTTGACAATATGTCCCTCGTGAAAATTAAATACATCGAGTTATAATAATCATTATTTGAAAGGAAATTACTACAAATAAAAAAATATCAAACTATTTACAATTATAAATTTTTTTTACTATCTATCAACGATAGATTGCGATAGGCTTCTATATTTATAAATAATTTGCTTCATTTTTCTATATTTAAAAATAACCCTTCTTTCTTTTTTTTTTTCTTTTTGGAAATTGAAAGTATAATCTAGGATATTAATTAATCCATATTTCCATACCAAATTTTATTCTCTCTCGAGTCATGAGCCACTTTCCAACATTAAATAAGCAAGTTTTAATGACGCTCTTTAAAAGTCATGATATAAGGACAAAAAACTTTTCATAAATTTGAGCCTATTCTTTTAGGTTTGTTTGATTTTTTAATAGTTTTATATTCAAGACATAAAGTTAAGATATTGTCCAATTAGTGTTAGAATGTTTTATTTTTTTTTATAATTTGTTTAATGATGTGAATTTTGTACTAATTTGAGCTACAAAACATACACAAACATTTAATTAATTAAGTTATAAATTTGGGAGTTGTTCCATCAAATTTTACTTTTATCTTGCTCCATGTTTTATTTTCTAATTGCTTGAACCCTTGTTTTTTTTTAATAAACCAATCATATGAATATATATTTTAGGATTAATTTGTATTTTTCTTATAAAATAAAAATCAACCTTTTCAAACGGATAGACATTTATTCCTTCGTAAAGAATATAGAAAATTACACCTTTATTTGAAATAAATTTTTTCTAAGAGACAATGACAAATATAACAATCAAATTAAAGTATTAATAGCAACATTTTAAAAAGGATGCAAATATAGCAAAGTTTATCGGTGATAAACTTCAGGTGGTCTATTACTGATAGACTTTGCTATATTTACAATTCTTTTTTAAAATGTTGCATACATTTACTTATTATCTTTAAAATTACTACTCTTTACAATTATTCTATTTTTAAACAATATTAGAATTTGTGCACAAGATTTTTTTTTTTGCGTTTATTAAGGGAGTTTGTGTGGGTTTCTCCCTTCATATTTTTTTCATCCTTTGAGTCGTGTTCTTTTTATTTTTTATTTTTTTTATGTTTCTTTTGTAAATTGTTGTAATTCTCAATTTGTGCCTTTAGTTTAGACTATAAATTCTCGTTTTTGTTATTCATTACCTTACAATAAAAAAAAAAAACCTCTTTTTTCAATTTTTTTTTCACAAGATTAACTTTAAAAGCCAAAATGAATCTAGCTTAATTGACCACGTTATCAACCCACATATTTATGGTTTCAATTCATTCAAACCTATTATATTAAAAAAATAACTTTAATATTTAGACATTCAAAAAAGTTATTGTAATTAAATATTGTTTCTTTACTGTGAGTCTGTGACAAGAAATTAATTGATTGTGCACCTGTTTTTTCTTTTCCCTTTACTAATCCAATGAGGATTTGACACGTCAAAACTAAAGTAAAAATTGTTCGGTAAAAAGATATCCGCAAACAAAGGAAAGGACGTATGTTGCGAAAAGGCGACAAGTTTTAAAAGGGACTTTATCATCATTTTTTTTCCTTGAAAAAGACTTTATCATCGTTAAAAAAAAGAATTAAATACTTAAAATACTTTAGAATTTGTTCAAATTTTAGTCTCAATATTTTCAAAAAGAATATTGCTTATTTTGTTGTTGATTTTTTTTTCATTTTTTTAATTTATTAGCACTTTCACAATAAATTTTGAAAACATTCACATATTATACTTTATTTAGCCAATTTAAAAAAAAAATCAACTTTAAAAACTAAATTTAAGATTTACGGAAGATTTAAAATTAAACAAGCTTCAAAGTATATTAAAATGATATTTTAACCCAACAAAAAAAATTTTAAGCCAGTGATAGAATACTGTTGTGAAGTCTGAGTTTAAAATATTTAATATTACTTATAATAACAACTTTTATTTTTATGTTAAATTGCTTTGAAGTTTAAATTTTAAAGAAAATTACTATAACTAGAAAAAAGATCAAACTATTTATGATAAACAGTTAAATTTTTTTATATTTGTAAATAATTTGACTTATTTTTCTATATTTGAAAATAACTTAAATTTTAAACGGAACATTATGATAAATTTTGTGTTAAAATATAGTTTTTACTCCTTAAATTTAGGGAAATTACTATAAACGGAAAAAGATATCAAACTATTTACAAATATAGAAAAAATTTATTGTCTATCAACGATAGATCGCAATAGAATTCTATCGCTTAAATAGTTTGACTCGTTTTTCTATATTTGAAAACACTCCTTAAAATTATTTTTATTTTTATGGCATTATTGTGAAAATTTATTTAAATTTGGTCCTTCTAAATCCTAAATGTCGATATTTTAATTTTAATTTTAATAATGATACATACAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTAGGAGCGTTGCTTGTGTACGACATAACTCGAATGACTACATTTGATAACGTAAAGAAATGGCTACGAGAATTGAGGGAGTTCGGGAATTCAGACATGGTGATCATTCTAATTGGAAACAAATGTGATTTAGATCAATCTCGTGAAGTGCAAGAAGAAGAAGCACAACGTTTAGCAGAGTTCGAAGACTTATTTTTCATGGAAACTTCTGCAAAGAACAATGTGAATGTGGAAGAGGCATTCCTTGAAATGGTTCGTAGGATCCATGCCATTGCATCCCAAAAGTCTTTGGATAATTTGCATACAAATTTTGAAAAGCTGGTGCTTTCCAAATGGAAAAGAAATTCTTAG

mRNA sequence

ATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACAATCGGCGTGGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGCACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTAGGAGCGTTGCTTGTGTACGACATAACTCGAATGACTACATTTGATAACGTAAAGAAATGGCTACGAGAATTGAGGGAGTTCGGGAATTCAGACATGGTGATCATTCTAATTGGAAACAAATGTGATTTAGATCAATCTCGTGAAGTGCAAGAAGAAGAAGCACAACGTTTAGCAGAGTTCGAAGACTTATTTTTCATGGAAACTTCTGCAAAGAACAATGTGAATGTGGAAGAGGCATTCCTTGAAATGGTTCGTAGGATCCATGCCATTGCATCCCAAAAGTCTTTGGATAATTTGCATACAAATTTTGAAAAGCTGGTGCTTTCCAAATGGAAAAGAAATTCTTAG

Coding sequence (CDS)

ATGGCGGATTCGTTGGACGAAGAGTGCGATTATCTGTTCAAGGCGGTTCTGACGGGCGATTCCGGCGTCGGAAAATCCAATCTCCTCTCTCGTTTTGCCAAAAACGAATTCCGATTCGACTCTAAACCGACAATCGGCGTGGAGTTCGCTTACCGGAATATTAAGGTCGCCGATAAGCTCATCAAAACCCAAATCTGGCACACCGCCGGCCAAGAAAGATTTAGGGCAATTACAAGTTCTTATTATCGAGGAGCATTAGGAGCGTTGCTTGTGTACGACATAACTCGAATGACTACATTTGATAACGTAAAGAAATGGCTACGAGAATTGAGGGAGTTCGGGAATTCAGACATGGTGATCATTCTAATTGGAAACAAATGTGATTTAGATCAATCTCGTGAAGTGCAAGAAGAAGAAGCACAACGTTTAGCAGAGTTCGAAGACTTATTTTTCATGGAAACTTCTGCAAAGAACAATGTGAATGTGGAAGAGGCATTCCTTGAAATGGTTCGTAGGATCCATGCCATTGCATCCCAAAAGTCTTTGGATAATTTGCATACAAATTTTGAAAAGCTGGTGCTTTCCAAATGGAAAAGAAATTCTTAG

Protein sequence

MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLDNLHTNFEKLVLSKWKRNS

Homology

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BLAST of HG10008393 vs. NCBI nr
Match: XP_004137339.1 (ras-related protein RABA6a [Cucumis sativus] >KGN63869.1 hypothetical protein Csa_013176 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 171/193 (88.60%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           +KTQIW TAGQERFRAITSSYYRGALGALLVYDITR+ TFDN+KKWLRELREFGN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDL QSREVQEEEA+ LAE E+LFFMETSAK+N+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           +LD LH  FEKLV
Sbjct: 181 TLD-LHKKFEKLV 192

[Close]

BLAST of HG10008393 vs. NCBI nr
Match: XP_038880228.1 (LOW QUALITY PROTEIN: ras-related protein RABA6a-like [Benincasa hispida])

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90
Identity = 173/193 (89.64%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           M D LDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIK+ADKL
Sbjct: 1   MGDLLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKLADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IKTQIW TAGQERFRAITSSYYRGALGALLVYDITR+ TFDNVKKWL ELRE GNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNVKKWLGELRELGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDLDQ REV+EEEA+ LAE EDLFFMETSAK+NVNVEEAFLEMVRRIH IASQK
Sbjct: 121 ILVGNKCDLDQYREVEEEEARGLAELEDLFFMETSAKDNVNVEEAFLEMVRRIHGIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           +LD  HTNFEKL+
Sbjct: 181 TLD-FHTNFEKLL 192

[Close]

BLAST of HG10008393 vs. NCBI nr
Match: XP_008453474.1 (PREDICTED: ras-related protein RABA6a-like [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 2.9e-89
Identity = 170/193 (88.08%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDEECDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           +KTQIW TAGQERFRAITSSYYRGALGALLVYDITR+ TFDN+KKWLRELREFGN DMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDL QSREVQEEEA+ LAE E+L FMETSAK+N+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           +LD LH    KLV
Sbjct: 181 TLD-LHKKIVKLV 192

[Close]

BLAST of HG10008393 vs. NCBI nr
Match: XP_023529393.1 (ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 6.6e-86
Identity = 168/193 (87.05%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IKTQIW TAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+FGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           +L+GNK DL  SREV+EEE +RLAE EDLFFMETSA +NVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           SL NL    EKLV
Sbjct: 181 SL-NLPKRIEKLV 192

[Close]

BLAST of HG10008393 vs. NCBI nr
Match: KAG7021646.1 (Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 168/193 (87.05%), Postives = 175/193 (90.67%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IKTQIW TAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+FGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           +L+GNK DL  SREV EEE +RLAE EDLFFMETSA +NVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           SL NL    EKLV
Sbjct: 181 SL-NLPKRIEKLV 192

[Close]

BLAST of HG10008393 vs. ExPASy Swiss-Prot
Match: Q9C9U7 (Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.0e-73
Identity = 132/178 (74.16%), Postives = 154/178 (86.52%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           D+ +EECDYLFKAVL GDS VGKSNLLSRF+K+EFRFDSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIIL 122
            QIW TAGQERFRAITSSYYRGALGALL+YDITR TTFDN+KKWL ELR+F N + V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 IGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 181
           +GNK DL QSREV+E+E + LAE E L+F+ETSA  NVNVEEAFL M+ RIH + +Q+
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181

[Close]

BLAST of HG10008393 vs. ExPASy Swiss-Prot
Match: Q0WQN4 (Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 6.9e-70
Identity = 130/183 (71.04%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           +S DEECDYLFKAVL GDS VGKSNLLSRF+++EFR DSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIIL 122
            QIW TAGQERFRAITSSYYRGALGALL+YDITR  TF N++KWL ELR F + + V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 IGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK-S 182
           +GNK DL QSREV+EEE + LAE E L+F+ETSA  N NVEEAFL M+ RIH + +QK  
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 LDN 185
           LDN
Sbjct: 184 LDN 186

[Close]

BLAST of HG10008393 vs. ExPASy Swiss-Prot
Match: Q9FJH0 (Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.2e-59
Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF +NEF  +SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALLVYD+TR  TF+NV++WL+ELR+  ++++VI+ +GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           K DL   R V  E+A+  AE E+ FFMETSA  ++NVE AF E++ +I+ + S+K+LD
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALD 184

[Close]

BLAST of HG10008393 vs. ExPASy Swiss-Prot
Match: Q1PEX3 (Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.3e-59
Identity = 108/178 (60.67%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF +N+F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALLVYD+TR  TF+NV++WL+ELR+  +++ VI+L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           K DL+  R +  EE +  AE E+ FFMETSA   +NVE AF E++ +I+ + S+K+LD
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALD 184

[Close]

BLAST of HG10008393 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-58
Identity = 112/178 (62.92%), Postives = 138/178 (77.53%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           DEE DYLFK VL GDSGVGKSNLLSRF KNEF  +SK TIGVEFA +  KV  K++K QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALL+YD+TR  TF+N  +WLRELR   + ++V++LIGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           KCDL     V+ EEA+  AE E L+FMETSA +  NVE AF E++ +IH I S++S+D
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVD 184

[Close]

BLAST of HG10008393 vs. ExPASy TrEMBL
Match: A0A0A0LS89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.6e-91
Identity = 171/193 (88.60%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDE+CDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           +KTQIW TAGQERFRAITSSYYRGALGALLVYDITR+ TFDN+KKWLRELREFGN +MVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDL QSREVQEEEA+ LAE E+LFFMETSAK+N+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           +LD LH  FEKLV
Sbjct: 181 TLD-LHKKFEKLV 192

[Close]

BLAST of HG10008393 vs. ExPASy TrEMBL
Match: A0A1S3BWB9 (ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 170/193 (88.08%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADSLDEECDYLFKAVLTGDSGVGKSNLLSRF+KNEFRFDS+PTIGVEFAYRNIKVADKL
Sbjct: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           +KTQIW TAGQERFRAITSSYYRGALGALLVYDITR+ TFDN+KKWLRELREFGN DMVI
Sbjct: 61  VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDL QSREVQEEEA+ LAE E+L FMETSAK+N+NVEEAFLEMVRRIHAIASQK
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLLFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           +LD LH    KLV
Sbjct: 181 TLD-LHKKIVKLV 192

[Close]

BLAST of HG10008393 vs. ExPASy TrEMBL
Match: A0A6J1F0C2 (ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 168/193 (87.05%), Postives = 175/193 (90.67%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IKTQIW TAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+FGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAVTFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           +L+GNK DL  SREV EEE +RLAE EDLFFMETSA +NVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLSHSREVHEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           SL NL    EKLV
Sbjct: 181 SL-NLPKRIEKLV 192

[Close]

BLAST of HG10008393 vs. ExPASy TrEMBL
Match: A0A6J1KQ67 (ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 7.1e-86
Identity = 167/193 (86.53%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFA+ EFR DSKPTIGVEFAYRNIKVADKL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFARAEFRLDSKPTIGVEFAYRNIKVADKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IKTQIW TAGQERFRAITSSYYRGALGALLVYDITR  TF+NVKKWLRELR+FGNSDMVI
Sbjct: 61  IKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRAATFENVKKWLRELRDFGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           +L+GNK DL+ SREV+EEE +RLAE EDLFFMETSA +NVNVEEAFLEMVRRIHAIASQK
Sbjct: 121 VLVGNKSDLNHSREVEEEEGRRLAESEDLFFMETSAMDNVNVEEAFLEMVRRIHAIASQK 180

Query: 181 SLDNLHTNFEKLV 194
           SL NL    EK V
Sbjct: 181 SL-NLPKRIEKFV 192

[Close]

BLAST of HG10008393 vs. ExPASy TrEMBL
Match: A0A6J1BZG6 (ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 163/192 (84.90%), Postives = 171/192 (89.06%), Query Frame = 0


Query: 1   MADSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKL 60
           MADS DEECDYLFKAVLTGDSGVGKSNLLSRFAK+EFR DSKPTIGVEFAYRNIKVA KL
Sbjct: 1   MADSFDEECDYLFKAVLTGDSGVGKSNLLSRFAKSEFRLDSKPTIGVEFAYRNIKVAGKL 60

Query: 61  IKTQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVI 120
           IK QIW TAGQERFRAITSSYYRGALGALLVYD+TR+ TF+NVKKWLRELREFGNSDMVI
Sbjct: 61  IKAQIWDTAGQERFRAITSSYYRGALGALLVYDVTRVATFENVKKWLRELREFGNSDMVI 120

Query: 121 ILIGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 180
           IL+GNKCDL  SREVQEEE + LAE E LFFMETSA  NVNVEE FL+MVRRIH IASQK
Sbjct: 121 ILVGNKCDLGHSREVQEEEGRLLAESESLFFMETSAMKNVNVEEVFLQMVRRIHEIASQK 180

Query: 181 SLDNLHTNFEKL 193
           +LD L    EKL
Sbjct: 181 ALD-LPKQIEKL 191

[Close]

BLAST of HG10008393 vs. TAIR 10
Match: AT1G73640.1 (RAB GTPase homolog A6A )

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-74
Identity = 132/178 (74.16%), Postives = 154/178 (86.52%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           D+ +EECDYLFKAVL GDS VGKSNLLSRF+K+EFRFDSKPTIGVEFAYRN+ V DK+IK
Sbjct: 4   DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIK 63

Query: 63  TQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIIL 122
            QIW TAGQERFRAITSSYYRGALGALL+YDITR TTFDN+KKWL ELR+F N + V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVL 123

Query: 123 IGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK 181
           +GNK DL QSREV+E+E + LAE E L+F+ETSA  NVNVEEAFL M+ RIH + +Q+
Sbjct: 124 VGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181

[Close]

BLAST of HG10008393 vs. TAIR 10
Match: AT1G18200.1 (RAB GTPase homolog A6B )

HSP 1 Score: 265.0 bits (676), Expect = 4.9e-71
Identity = 130/183 (71.04%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 3   DSLDEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIK 62
           +S DEECDYLFKAVL GDS VGKSNLLSRF+++EFR DSKPTIGV+FAYRN++V DK IK
Sbjct: 4   ESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIK 63

Query: 63  TQIWHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIIL 122
            QIW TAGQERFRAITSSYYRGALGALL+YDITR  TF N++KWL ELR F + + V++L
Sbjct: 64  AQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVL 123

Query: 123 IGNKCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQK-S 182
           +GNK DL QSREV+EEE + LAE E L+F+ETSA  N NVEEAFL M+ RIH + +QK  
Sbjct: 124 VGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIV 183

Query: 183 LDN 185
           LDN
Sbjct: 184 LDN 186

[Close]

BLAST of HG10008393 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 228.4 bits (581), Expect = 5.1e-60
Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           D+E DYLFK VL GDSGVGKSNLLSRF +NEF  +SK TIGVEFA R+I V DK++K QI
Sbjct: 7   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALLVYD+TR  TF+NV++WL+ELR+  ++++VI+ +GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           K DL   R V  E+A+  AE E+ FFMETSA  ++NVE AF E++ +I+ + S+K+LD
Sbjct: 127 KADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALD 184

[Close]

BLAST of HG10008393 vs. TAIR 10
Match: AT2G33870.1 (RAB GTPase homolog A1H )

HSP 1 Score: 228.0 bits (580), Expect = 6.6e-60
Identity = 108/178 (60.67%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           +++ DYLFK VLTGDSGVGKSNLLSRF +N+F  DS+ TIGVEFA R+I+V DK++K QI
Sbjct: 7   EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALLVYD+TR  TF+NV++WL+ELR+  +++ VI+L+GN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           K DL+  R +  EE +  AE E+ FFMETSA   +NVE AF E++ +I+ + S+K+LD
Sbjct: 127 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALD 184

[Close]

BLAST of HG10008393 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59
Identity = 112/178 (62.92%), Postives = 138/178 (77.53%), Query Frame = 0


Query: 6   DEECDYLFKAVLTGDSGVGKSNLLSRFAKNEFRFDSKPTIGVEFAYRNIKVADKLIKTQI 65
           DEE DYLFK VL GDSGVGKSNLLSRF KNEF  +SK TIGVEFA +  KV  K++K QI
Sbjct: 7   DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66

Query: 66  WHTAGQERFRAITSSYYRGALGALLVYDITRMTTFDNVKKWLRELREFGNSDMVIILIGN 125
           W TAGQER+RAITS+YYRGA+GALL+YD+TR  TF+N  +WLRELR   + ++V++LIGN
Sbjct: 67  WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126

Query: 126 KCDLDQSREVQEEEAQRLAEFEDLFFMETSAKNNVNVEEAFLEMVRRIHAIASQKSLD 184
           KCDL     V+ EEA+  AE E L+FMETSA +  NVE AF E++ +IH I S++S+D
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVD 184

The following BLAST results are available for this feature:

BLAST of HG10008393 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137339.1	1.2e-90	88.60	ras-related protein RABA6a [Cucumis sativus] >KGN63869.1 hypothetical protein Cs...	[more]
XP_038880228.1	1.5e-90	89.64	LOW QUALITY PROTEIN: ras-related protein RABA6a-like [Benincasa hispida]	[more]
XP_008453474.1	2.9e-89	88.08	PREDICTED: ras-related protein RABA6a-like [Cucumis melo]	[more]
XP_023529393.1	6.6e-86	87.05	ras-related protein RABA6b-like [Cucurbita pepo subsp. pepo]	[more]
KAG7021646.1	1.1e-85	87.05	Ras-related protein RABA6b, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10008393 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9U7	3.0e-73	74.16	Ras-related protein RABA6a OS=Arabidopsis thaliana OX=3702 GN=RABA6A PE=2 SV=1	[more]
Q0WQN4	6.9e-70	71.04	Ras-related protein RABA6b OS=Arabidopsis thaliana OX=3702 GN=RABA6B PE=2 SV=2	[more]
Q9FJH0	7.2e-59	61.80	Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1	[more]
Q1PEX3	9.3e-59	60.67	Ras-related protein RABA1h OS=Arabidopsis thaliana OX=3702 GN=RABA1H PE=2 SV=1	[more]
P28185	1.6e-58	62.92	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]

BLAST of HG10008393 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS89	5.6e-91	88.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025010 PE=4 SV=1	[more]
A0A1S3BWB9	1.4e-89	88.08	ras-related protein RABA6a-like OS=Cucumis melo OX=3656 GN=LOC103494177 PE=4 SV=...	[more]
A0A6J1F0C2	5.5e-86	87.05	ras-related protein RABA6b-like OS=Cucurbita moschata OX=3662 GN=LOC111441184 PE...	[more]
A0A6J1KQ67	7.1e-86	86.53	ras-related protein RABA6a-like OS=Cucurbita maxima OX=3661 GN=LOC111497252 PE=4...	[more]
A0A6J1BZG6	1.1e-83	84.90	ras-related protein RABA6b OS=Momordica charantia OX=3673 GN=LOC111006897 PE=4 S...	[more]

BLAST of HG10008393 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73640.1	2.1e-74	74.16	RAB GTPase homolog A6A	[more]
AT1G18200.1	4.9e-71	71.04	RAB GTPase homolog A6B	[more]
AT5G60860.1	5.1e-60	61.80	RAB GTPase homolog A1F	[more]
AT2G33870.1	6.6e-60	60.67	RAB GTPase homolog A1H	[more]
AT1G06400.1	1.1e-59	62.92	Ras-related small GTP-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 54..76 score: 45.98 coord: 116..129 score: 49.99 coord: 13..34 score: 52.08 coord: 151..173 score: 46.59 coord: 36..52 score: 34.81
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 4.2E-98 score: 341.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 1.3E-27 score: 107.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..197 e-value: 2.2E-5 score: 27.1
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 3..186
None	No IPR available	PANTHER	PTHR47979:SF52	RAS-RELATED PROTEIN RABA6B	coord: 3..186
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..175 score: 9.172775
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..201 score: 34.472679
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 3.62904E-104 score: 295.238
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..176 e-value: 3.6E-10 score: 11.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.4E-58 score: 197.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 7..201 score: 18.049795
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..167 e-value: 5.5E-30 score: 102.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..198 e-value: 2.8E-67 score: 227.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008393.1	HG10008393.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding