HG10008282 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008282
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Location	Chr10: 21540104 .. 21541273 (-)
RNA-Seq Expression	HG10008282
Synteny	HG10008282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGGCATCGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAAGATGAAATTGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGAAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACCAAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAGCTATCGATTTGGCTAGGTCACCGAGGTTAGTCTATTGTAGATGTATTATTTCCCATTTTTTGATTTTTTTTCTCATATGGTGGTGTTTGGGATTTATTAGCTCCGCTTATAATCTGAAAATAAATGTAATTACTGTGGTTGATAAGGACATATTGAACTGTTGTAACAATTGAATAGCTTAGTCCACTGCCTTCTTCCTTGAAGTTTAAGCAACAACTTTGCTTGTTGCCAGATTCTTATTATAATCTCTGGAACGAGAGTGTTTTTGTATTTGTACAGAGTCTAGATTGTAGCCTTCTCCCTGACATTCGGTTTTAATAGTCAGATTAATGTGTTAATTAATTGTGCACTGTGTTTCTATACTCCACTTCCTAGTCACTTATAATTTTATAGATGTTCAATGGGATATCTGAATATATCGTCATCCTTGAGGCTCTGACTAAAGTACTTGACATCTATACTCCTGAGAATGCTCCTTAG

mRNA sequence

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCATGTTCAATGGGATATCTGAATATATCGTCATCCTTGAGGCTCTGACTAAAGTACTTGACATCTATACTCCTGAGAATGCTCCTTAG

Coding sequence (CDS)

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCATGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCATGTTCAATGGGATATCTGAATATATCGTCATCCTTGAGGCTCTGACTAAAGTACTTGACATCTATACTCCTGAGAATGCTCCTTAG

Protein sequence

MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFMFNGISEYIVILEALTKVLDIYTPENAP

Homology

[Close]

BLAST of HG10008282 vs. NCBI nr
Match: KAG6589703.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023383.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-47
Identity = 127/146 (86.99%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRY DRERDRD+RERDRRRDREDRDRDRERRR+++DRD E
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGRGKRSHTP+R RSRHTRSRTRSPDRHRSRSLSRTPEDRS RRRHRSPSPDH RKRH
Sbjct: 61  RERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFMFNGISE 147
           R+DLT DDEK+RQKAVSDF+ +GI++
Sbjct: 121 RRDLTADDEKDRQKAVSDFV-DGIAK 145

[Close]

BLAST of HG10008282 vs. NCBI nr
Match: XP_008453595.1 (PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo] >KAA0058267.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa] >TYK11820.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFMFNGISE 147
           ARKRHR+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFV-DGIAK 148

[Close]

BLAST of HG10008282 vs. NCBI nr
Match: XP_004146322.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65465.1 hypothetical protein Csa_019811 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 131/151 (86.75%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRDQ+
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRS TPDR RSR  RSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFMFNGISE 147
           ARKRHR+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFV-DGIAK 148

[Close]

BLAST of HG10008282 vs. NCBI nr
Match: XP_023530476.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530477.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530478.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530479.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-44
Identity = 123/146 (84.25%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDR     DRDR+RERRRD+EDRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDR-----DRDRERERRRDREDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPDRHR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSPDRHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFMFNGISE 147
           R+DLT DD+KERQK VSDF+ +GI++
Sbjct: 121 RRDLTVDDDKERQKVVSDFV-DGIAK 140

[Close]

BLAST of HG10008282 vs. NCBI nr
Match: XP_022135124.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-44
Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRE           RDRERRRD++DRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRE-----------RDRERRRDRDDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPDRHRSRSLSRTPEDRS RRRHR+PSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRTRSRHTRSRTRSPDRHRSRSLSRTPEDRSGRRRHRTPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFMFNGISE 147
           R+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 RRDLTADDEKERQKAVSDFV-DGIAK 134

[Close]

BLAST of HG10008282 vs. ExPASy Swiss-Prot
Match: Q551H4 (Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum OX=44689 GN=fray2 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 68/131 (51.91%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 3   DRERDRD---RGRDRDKDWDRDRYKDRERDRDH---RERDRRRDRE-----DRDRDRERR 62
           DRER+RD   R RDRD++ +R+R +DRERDRD    R RDR RDRE     DR RDR+R 
Sbjct: 756 DRERERDRHNRSRDRDRERERERDRDRERDRDRSRDRSRDRSRDRERDRSRDRSRDRDRS 815

Query: 63  RDQ-EDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRS 122
           RD+  DR RER+R R  R  + DR RSR + SR RS DR RS S  R    R SR + R 
Sbjct: 816 RDRSRDRSRERDRDR-SRDRSRDRSRSRDSDSRDRSRDRSRSHSNRRRSRSRDSRNKSRD 875

[Close]

BLAST of HG10008282 vs. ExPASy TrEMBL
Match: A0A5D3CK71 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00330 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.4e-47
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFMFNGISE 147
           ARKRHR+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFV-DGIAK 148

[Close]

BLAST of HG10008282 vs. ExPASy TrEMBL
Match: A0A1S3BW27 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494258 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 5.4e-47
Identity = 132/151 (87.42%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFMFNGISE 147
           ARKRHR+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFV-DGIAK 148

[Close]

BLAST of HG10008282 vs. ExPASy TrEMBL
Match: A0A0A0LU61 (SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.0e-46
Identity = 131/151 (86.75%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRDQ+
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRS TPDR RSR  RSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFMFNGISE 147
           ARKRHR+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFV-DGIAK 148

[Close]

BLAST of HG10008282 vs. ExPASy TrEMBL
Match: A0A6J1C0K3 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Momordica charantia OX=3673 GN=LOC111007178 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.3e-44
Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRE           RDRERRRD++DRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRE-----------RDRERRRDRDDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPDRHRSRSLSRTPEDRS RRRHR+PSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRTRSRHTRSRTRSPDRHRSRSLSRTPEDRSGRRRHRTPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFMFNGISE 147
           R+DLT DDEKERQKAVSDF+ +GI++
Sbjct: 121 RRDLTADDEKERQKAVSDFV-DGIAK 134

[Close]

BLAST of HG10008282 vs. ExPASy TrEMBL
Match: A0A6J1L1Y6 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111499666 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.6e-44
Identity = 121/146 (82.88%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDR     DRDR+RERRRD++DRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDR-----DRDRERERRRDRDDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPD+HR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSPDQHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFMFNGISE 147
           R+DLT DD+KERQK VSDF+ +GI++
Sbjct: 121 RRDLTVDDDKERQKVVSDFV-DGIAK 140

[Close]

BLAST of HG10008282 vs. TAIR 10
Match: AT5G57370.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 0


Query: 19  DRDRYKDRERDRDHR-ERDRRRDREDRDRDRERRRDQEDRDRERERG---RGKRSHTPDR 78
           +RDR ++RERD+D   +RDRRR R+DRDRDR+R R++ DR+R+R+RG   +  RS TPD 
Sbjct: 3   ERDR-RERERDKDREPDRDRRRGRDDRDRDRDRDRER-DRERDRDRGLRNKKSRSRTPD- 62

Query: 79  DRSRHTRSR-TRSPDRHRSRSLS---RTPEDRSSRRRHRSPSPD-HARKRHRQDLTGDDE 135
               H R+R  RSP+R+RSRS S       DR    R RSPSPD  +RKR RQ  + DDE
Sbjct: 63  ---HHARARHVRSPERYRSRSRSIDRDRDRDRQRHHRRRSPSPDAPSRKRPRQG-SVDDE 120

The following BLAST results are available for this feature:

BLAST of HG10008282 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589703.1	1.0e-47	86.99	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argy...	[more]
XP_008453595.1	1.1e-46	87.42	PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo...	[more]
XP_004146322.1	1.2e-45	86.75	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65...	[more]
XP_023530476.1	1.8e-44	84.25	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo sub...	[more]
XP_022135124.1	6.8e-44	82.19	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Momordica charantia]	[more]

BLAST of HG10008282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q551H4	9.3e-04	51.91	Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum OX=44689 GN=fr...	[more]

BLAST of HG10008282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK71	5.4e-47	87.42	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. mak...	[more]
A0A1S3BW27	5.4e-47	87.42	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 ...	[more]
A0A0A0LU61	6.0e-46	86.75	SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=...	[more]
A0A6J1C0K3	3.3e-44	82.19	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Momordica charantia O...	[more]
A0A6J1L1Y6	5.6e-44	82.88	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima...	[more]

BLAST of HG10008282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57370.1	2.5e-04	52.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008282.1	HG10008282.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005634	nucleus