HG10008255 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGAAACGTGGATGCAAAGGGAGGATGGAAAAATTGCCCATTTATCTTCTCTGCCTGAAGGAGTAATAGCTTACATCTTGTCGCTCACGAGTCCATTCGATGTCTGCAGATCGTCGGCAGTTTCCCGATTTTTCAATGCGACAGCGCAGTCGGATATCGCTTGGGATAGATTCCTGCCTACGGATTGGAACGTGTTGATTTCTCCGAGGAAATCAGTTGAACAGAATGTTGATCCAATTTCGAGCTCGAAGAAGTAG ATGGAAGAAGAAACGTGGATGCAAAGGGAGGATGGAAAAATTGCCCATTTATCTTCTCTGCCTGAAGGAGTAATAGCTTACATCTTGTCGCTCACGAGTCCATTCGATGTCTGCAGATCGTCGGCAGTTTCCCGATTTTTCAATGCGACAGCGCAGTCGGATATCGCTTGGGATAGATTCCTGCCTACGGATTGGAACGTGTTGATTTCTCCGAGGAAATCAGTTGAACAGAATGTTGATCCAATTTCGAGCTCGAAGAAGTAG ATGGAAGAAGAAACGTGGATGCAAAGGGAGGATGGAAAAATTGCCCATTTATCTTCTCTGCCTGAAGGAGTAATAGCTTACATCTTGTCGCTCACGAGTCCATTCGATGTCTGCAGATCGTCGGCAGTTTCCCGATTTTTCAATGCGACAGCGCAGTCGGATATCGCTTGGGATAGATTCCTGCCTACGGATTGGAACGTGTTGATTTCTCCGAGGAAATCAGTTGAACAGAATGTTGATCCAATTTCGAGCTCGAAGAAGTAG MEEETWMQREDGKIAHLSSLPEGVIAYILSLTSPFDVCRSSAVSRFFNATAQSDIAWDRFLPTDWNVLISPRKSVEQNVDPISSSKK Homology
BLAST of HG10008255 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia]) HSP 1 Score: 114.4 bits (285), Expect = 5.0e-22 Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of HG10008255 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia]) HSP 1 Score: 114.4 bits (285), Expect = 5.0e-22 Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of HG10008255 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida]) HSP 1 Score: 108.2 bits (269), Expect = 3.6e-20 Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of HG10008255 vs. NCBI nr
Match: XP_038878692.1 (F-box protein PP2-B10-like [Benincasa hispida]) HSP 1 Score: 107.1 bits (266), Expect = 7.9e-20 Identity = 56/87 (64.37%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of HG10008255 vs. NCBI nr
Match: XP_023001976.1 (F-box protein PP2-B10-like [Cucurbita maxima]) HSP 1 Score: 106.7 bits (265), Expect = 1.0e-19 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-11 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-08 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-08 Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 7.2e-08 Identity = 24/55 (43.64%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy TrEMBL
Match: A0A6J1BZ47 (F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22 Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy TrEMBL
Match: A0A6J1C117 (F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22 Identity = 60/87 (68.97%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy TrEMBL
Match: A0A6J1KK45 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495993 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.0e-20 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy TrEMBL
Match: A0A6J1ES31 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111436000 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 55/86 (63.95%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of HG10008255 vs. ExPASy TrEMBL
Match: A0A0A0LUI2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421930 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 9.5e-19 Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of HG10008255 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 ) HSP 1 Score: 62.4 bits (150), Expect = 2.1e-10 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of HG10008255 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 ) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09 Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of HG10008255 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 ) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-09 Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of HG10008255 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 ) HSP 1 Score: 57.8 bits (138), Expect = 5.1e-09 Identity = 24/55 (43.64%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of HG10008255 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 ) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08 Identity = 24/61 (39.34%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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