HG10008254 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10008254
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein PP2-B10-like
LocationChr10: 21272919 .. 21273552 (-)
RNA-Seq ExpressionHG10008254
SyntenyHG10008254
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGAGCAAGGGACCTCTCAGTTGTTTGGGGTGATACCCCTTTTTATTGGACCTGGGAACACCATCCTGATTCGAGGTTCAAAGTCTATGAGATATGAGCAAATCGTATTCCCCTCCCAATTCTAATACTCTGCTTTTTTAATGTGAATGTGTGGAATCAGATTTGCAGGGGTAGCTGTACTCCAAAATGTATGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTATCTCATAAAACAACTTATGCAATTTACTTTGTATTCAAGATGATGCGACATAGTTACTATGGGTTCGATATTGATCCTGCTGAGGCCGCAGTGGGAATTCTTGGAACTGAAAACCATCGGAAAAGTGTTTGTTTGGACCCTTATTTGAACAATCCTCGACCGGAGTACGATGATGAACCATTTATGATGTGGCCTCGGTCTGAAGACATGTCAGGATTCGAGCAGCCACAGGAGAGACATGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTGAAAGTAGTGATGGAGATGATGAAATTGAGATGAGTCTTATGGAGGTGAAAGGCACTACTGATAAGATTGGTCTTGTTGTTGAGGGGATTGAGATTAGGCCTAAACTCATGTTGTATCTATAA

mRNA sequence

ATGCTTGGAGCAAGGGACCTCTCAGTTGTTTGGGGTGATACCCCTTTTTATTGGACCTGGGAACACCATCCTGATTCGAGATTTGCAGGGGTAGCTGTACTCCAAAATGTATGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTATCTCATAAAACAACTTATGCAATTTACTTTGTATTCAAGATGATGCGACATAGTTACTATGGGTTCGATATTGATCCTGCTGAGGCCGCAGTGGGAATTCTTGGAACTGAAAACCATCGGAAAAGTGTTTGTTTGGACCCTTATTTGAACAATCCTCGACCGGAGTACGATGATGAACCATTTATGATGTGGCCTCGGTCTGAAGACATGTCAGGATTCGAGCAGCCACAGGAGAGACATGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTGAAAGTAGTGATGGAGATGATGAAATTGAGATGAGTCTTATGGAGGTGAAAGGCACTACTGATAAGATTGGTCTTGTTGTTGAGGGGATTGAGATTAGGCCTAAACTCATGTTGTATCTATAA

Coding sequence (CDS)

ATGCTTGGAGCAAGGGACCTCTCAGTTGTTTGGGGTGATACCCCTTTTTATTGGACCTGGGAACACCATCCTGATTCGAGATTTGCAGGGGTAGCTGTACTCCAAAATGTATGGTGGCTTGAAATACGTGGAAGAATAAGTTGCAGAATGTTATCTCATAAAACAACTTATGCAATTTACTTTGTATTCAAGATGATGCGACATAGTTACTATGGGTTCGATATTGATCCTGCTGAGGCCGCAGTGGGAATTCTTGGAACTGAAAACCATCGGAAAAGTGTTTGTTTGGACCCTTATTTGAACAATCCTCGACCGGAGTACGATGATGAACCATTTATGATGTGGCCTCGGTCTGAAGACATGTCAGGATTCGAGCAGCCACAGGAGAGACATGATGGTTGGTTTGAAATTGAGTTGGGAGAGTTTGAAAGTAGTGATGGAGATGATGAAATTGAGATGAGTCTTATGGAGGTGAAAGGCACTACTGATAAGATTGGTCTTGTTGTTGAGGGGATTGAGATTAGGCCTAAACTCATGTTGTATCTATAA

Protein sequence

MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIYFVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSEDMSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPKLMLYL
Homology
[Close]
BLAST of HG10008254 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 138/177 (77.97%), Postives = 153/177 (86.44%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLSVVWGDT  YWTWEH  +SRFA VAVL NVWWLEIRGRISCRMLS KTTYA+Y
Sbjct: 121 MLGARDLSVVWGDTSGYWTWEHRLESRFAEVAVLVNVWWLEIRGRISCRMLSPKTTYAVY 180

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVF M R  YYGFDIDPA+A VGILGTENHR+SVCLDPYL+NP+      P+MM P+SE 
Sbjct: 181 FVFNMRRCYYYGFDIDPADATVGILGTENHRRSVCLDPYLDNPQGRRRHAPWMMRPQSEG 240

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
           MSG E+PQ+RHDGWFEIELGEFES DGDDE+EM+L E+KG++DK GLVVEGIEIRPK
Sbjct: 241 MSGLERPQKRHDGWFEIELGEFESGDGDDEVEMALKELKGSSDKSGLVVEGIEIRPK 297

[Close]
BLAST of HG10008254 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.8e-75
Identity = 136/177 (76.84%), Postives = 153/177 (86.44%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLS+VWGDT +YW+WEHH DSRFA VAVL +VWWLEIRGRISCRMLS KTTYA Y
Sbjct: 120 MLGARDLSIVWGDTSYYWSWEHHTDSRFAEVAVLLDVWWLEIRGRISCRMLSPKTTYAAY 179

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVFKM +  YYGF+I+PA+A VGILGTE HRKSVCLDPYL+NP+      P+MM P+SED
Sbjct: 180 FVFKMRQRRYYGFNINPADATVGILGTEPHRKSVCLDPYLDNPQRRRRHAPWMMRPQSED 239

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
           M+G E P ERHDGWFEIELGEFES DGDDE+EM+LMEVKG++ K GLVVEGIEIRPK
Sbjct: 240 MAGLEWPPERHDGWFEIELGEFESGDGDDEVEMALMEVKGSSAKSGLVVEGIEIRPK 296

[Close]
BLAST of HG10008254 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 264.2 bits (674), Expect = 8.1e-67
Identity = 125/178 (70.22%), Postives = 140/178 (78.65%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLSVVWGDT FYWTWE HP+SRFA VAVL  VWWLEIRGRISCRMLS  TTYA Y
Sbjct: 125 MLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAY 184

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVFKM +  YYGF++DPA+A VG  GTEN  KSVCLDP+++NP       P  +    E 
Sbjct: 185 FVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLAVDQPPES 244

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPKL 179
           M G E+P++RHDGWFEIELGEF+S  GDDEIEM LMEVKG T K GLVV+GIEIRPK+
Sbjct: 245 MEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKI 302

[Close]
BLAST of HG10008254 vs. NCBI nr
Match: XP_023530002.1 (F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 120/177 (67.80%), Postives = 136/177 (76.84%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGAR++++VW DTP YWTWEHHPDSRFA VAVL  VWWLEIRGR+SCR+L+ +TTY +Y
Sbjct: 114 MLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVY 173

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFKM    Y GF+ D AE   GILGTE+  K+VCLDP L N R      P++M    E 
Sbjct: 174 LVFKMNEDEYRGFNFDLAEVRAGILGTESDPKTVCLDPDLENSRLRL--APWLMDHSLEM 233

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
            SG EQP+ER DGWFEIELGEFES DGDDE+EM LMEVKG T KIGLVVEGIEIRPK
Sbjct: 234 SSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGTRKIGLVVEGIEIRPK 288

[Close]
BLAST of HG10008254 vs. NCBI nr
Match: XP_023001982.1 (F-box protein PP2-B10-like [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 119/177 (67.23%), Postives = 135/177 (76.27%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGAR++++VW DTP YWTWEHHPDSRFA VAVL  VWWLEIRGR+SCR+L+ +TTY +Y
Sbjct: 110 MLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVY 169

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFKM    Y GF+ DPAE   GILGTE+  K+VCLDP L N        P++M    E 
Sbjct: 170 LVFKMNEDEYRGFNFDPAEVRAGILGTESDPKTVCLDPDLENSHLRL--APWLMDHSLEM 229

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
            SG EQP+ER DGWFEIELGEFES DGDDE+EM LMEVKG T K GLVVEGIEIRPK
Sbjct: 230 SSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRPK 284

[Close]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 84/208 (40.38%), Postives = 114/208 (54.81%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML A +L+++WGD+P YW W   P+S+F  VA L+NV W E+RG+ISC MLS  T Y++Y
Sbjct: 126 MLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVY 185

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLD----------------PYLNNPR 120
            VFK      YGFD+ P EA VG +G    +KSV  +                 Y    R
Sbjct: 186 VVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSR 245

Query: 121 PEYDDEPFMMWPR--SEDMSGFEQ-------PQERHDGWFEIELGEFE------SSDGDD 178
                 P+M   R   E++ G  +       P+ER DGW E+ELG+F         DG D
Sbjct: 246 AFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSD 305

[Close]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.4e-34
Identity = 79/183 (43.17%), Postives = 105/183 (57.38%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML A +LS++WGD P YW W   P+SRF  VA L++V W EIRGR + R+LS +T Y+ Y
Sbjct: 108 MLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAY 167

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFK +    YGF     EAAVG++G E  R+ +C    +   R                
Sbjct: 168 IVFKGV-DKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGR---------------- 227

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDG---DDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 180
                +P++R DGW EIELGEF +  G   +DEIEMS +E K    K GL+++GIEIRP 
Sbjct: 228 -RNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPA 272

[Close]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 80/179 (44.69%), Postives = 100/179 (55.87%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           M+ AR L++VWG    YW W   P++RF  VA L  VWWLEI G+I+  +LS  T YA Y
Sbjct: 95  MMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAY 154

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVFK   HS YGF   P E ++ +  TE+    V               +P M+    +D
Sbjct: 155 FVFK-WNHSPYGFR-QPVETSLVLADTESTDNVV---------------QPSMI-SLMQD 214

Query: 121 MSGFE--QPQERHDGWFEIELGEFESSDGD-DEIEMSLMEVKGTTDKIGLVVEGIEIRP 177
             G E   P  R DGW+E+ELG+F    GD  EIEMSL E KG  +K GL+V GIEIRP
Sbjct: 215 SGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255

[Close]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 73/182 (40.11%), Postives = 105/182 (57.69%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           M+ A +L++ WG++P  W W   P +RF  VA L  V   EIRGRI+ R++S KT Y+ Y
Sbjct: 132 MISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAY 191

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILG---TENHRKSVCLDPYLNNPRPEYDDEPFMMWPR 120
            V+K + +  YGF+    E  VG++G    E+ R+ +C D        E  DE F    R
Sbjct: 192 IVYKKL-NICYGFENVAVEVVVGVVGQDLEESCRRYICFD--------ETMDEQFRRRDR 251

Query: 121 SEDMSGFEQPQERHDGWFEIELGEFESSDG---DDEIEMSLMEVKGTTDKIGLVVEGIEI 177
            +++    +P+ R DGW EI++GEF +  G   DDEIEM  +E K    K GL+++GIEI
Sbjct: 252 GKNL---VKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEI 301

[Close]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-27
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML +++L + WG +P YW W   P+SRF  +A L +V W EIRG+ S R+LS  T Y+ Y
Sbjct: 155 MLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAY 214

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFK  +    G    P E  +G++G E+ ++ +    Y   PR               +
Sbjct: 215 IVFK-TKDRCPGLGHLPVEVGLGLVGQESSKRFI----YFIGPRDRRG---------RRE 274

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRP 177
                +P +R DGW E ELGEF + +  DEIE S++E+K  + K GL+++GIE RP
Sbjct: 275 TRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.9e-67
Identity = 125/178 (70.22%), Postives = 140/178 (78.65%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLSVVWGDT FYWTWE HP+SRFA VAVL  VWWLEIRGRISCRMLS  TTYA Y
Sbjct: 125 MLGARDLSVVWGDTSFYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPATTYAAY 184

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVFKM +  YYGF++DPA+A VG  GTEN  KSVCLDP+++NP       P  +    E 
Sbjct: 185 FVFKMRKRRYYGFNVDPADAMVGTGGTENRSKSVCLDPFIDNPLRRRRHVPLAVDQPPES 244

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPKL 179
           M G E+P++RHDGWFEIELGEF+S  GDDEIEM LMEVKG T K GLVV+GIEIRPK+
Sbjct: 245 MEGSERPKQRHDGWFEIELGEFQSDSGDDEIEMVLMEVKGNTPKSGLVVQGIEIRPKI 302

[Close]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match: A0A6J1KI64 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495996 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 119/177 (67.23%), Postives = 135/177 (76.27%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGAR++++VW DTP YWTWEHHPDSRFA VAVL  VWWLEIRGR+SCR+L+ +TTY +Y
Sbjct: 110 MLGARNITIVWSDTPEYWTWEHHPDSRFAEVAVLLQVWWLEIRGRMSCRILTRRTTYGVY 169

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFKM    Y GF+ DPAE   GILGTE+  K+VCLDP L N        P++M    E 
Sbjct: 170 LVFKMNEDEYRGFNFDPAEVRAGILGTESDPKTVCLDPDLENSHLRL--APWLMDHSLEM 229

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
            SG EQP+ER DGWFEIELGEFES DGDDE+EM LMEVKG T K GLVVEGIEIRPK
Sbjct: 230 SSGLEQPKERQDGWFEIELGEFESGDGDDEVEMDLMEVKGGTRKTGLVVEGIEIRPK 284

[Close]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match: A0A5D3CDA9 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G001090 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.2e-62
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLS+ WG+   YWTWE HPDSRFA VAVL  VWWLEIRGR+SCRMLS KT YA+Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDE--PFMMWPRS 120
           FVF +   SYYGF+IDP +A VGILG ENH KSVCLDPYL+ PR        P+   P+S
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPRQRQRQRRAPWERRPQS 235

Query: 121 EDMSGFEQPQERHDGWFEIELGEFESSDG-DDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 178
           E M   ++P +RHDGWFEIELGEF S D  DDE+EM+L EVKG++ K GLVVEGIEIRPK
Sbjct: 236 EHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVEGIEIRPK 295

[Close]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match: A0A5A7UT44 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006340 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-62
Identity = 121/182 (66.48%), Postives = 138/182 (75.82%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLS+ WG+   YWTWE HPDSRFA VAVL  VWWLEIRGR+SCRMLS KT YA+Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNP----RPEYDDEPFMMWP 120
           FVF +   SYYGF+IDP +A VGILG ENH KSVCLDPYL+ P    R      P+   P
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPQQRQRQRQRRAPWERRP 235

Query: 121 RSEDMSGFEQPQERHDGWFEIELGEFESSDG-DDEIEMSLMEVKGTTDKIGLVVEGIEIR 178
           +SE M   ++P +RHDGWFEIELGEF S D  DDE+EM+L EVKG++ K GLVVEGIEIR
Sbjct: 236 QSEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVEGIEIR 295

[Close]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match: A0A1S3BWQ1 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-62
Identity = 121/182 (66.48%), Postives = 138/182 (75.82%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           MLGARDLS+ WG+   YWTWE HPDSRFA VAVL  VWWLEIRGR+SCRMLS KT YA+Y
Sbjct: 116 MLGARDLSITWGENSDYWTWEDHPDSRFAEVAVLIYVWWLEIRGRLSCRMLSPKTVYAVY 175

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNP----RPEYDDEPFMMWP 120
           FVF +   SYYGF+IDP +A VGILG ENH KSVCLDPYL+ P    R      P+   P
Sbjct: 176 FVFNIEESSYYGFNIDPPDATVGILGHENHPKSVCLDPYLDQPQQRQRQRQRRAPWERRP 235

Query: 121 RSEDMSGFEQPQERHDGWFEIELGEFESSDG-DDEIEMSLMEVKGTTDKIGLVVEGIEIR 178
           +SE M   ++P +RHDGWFEIELGEF S D  DDE+EM+L EVKG++ K GLVVEGIEIR
Sbjct: 236 QSEHMPALDRPHKRHDGWFEIELGEFISGDDVDDELEMALKEVKGSSSKGGLVVEGIEIR 295

[Close]
BLAST of HG10008254 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 84/208 (40.38%), Postives = 114/208 (54.81%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML A +L+++WGD+P YW W   P+S+F  VA L+NV W E+RG+ISC MLS  T Y++Y
Sbjct: 126 MLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVY 185

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLD----------------PYLNNPR 120
            VFK      YGFD+ P EA VG +G    +KSV  +                 Y    R
Sbjct: 186 VVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSR 245

Query: 121 PEYDDEPFMMWPR--SEDMSGFEQ-------PQERHDGWFEIELGEFE------SSDGDD 178
                 P+M   R   E++ G  +       P+ER DGW E+ELG+F         DG D
Sbjct: 246 AFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSD 305

[Close]
BLAST of HG10008254 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 144.8 bits (364), Expect = 6.7e-35
Identity = 79/183 (43.17%), Postives = 105/183 (57.38%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML A +LS++WGD P YW W   P+SRF  VA L++V W EIRGR + R+LS +T Y+ Y
Sbjct: 108 MLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAY 167

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFK +    YGF     EAAVG++G E  R+ +C    +   R                
Sbjct: 168 IVFKGV-DKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGR---------------- 227

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDG---DDEIEMSLMEVKGTTDKIGLVVEGIEIRPK 180
                +P++R DGW EIELGEF +  G   +DEIEMS +E K    K GL+++GIEIRP 
Sbjct: 228 -RNVVKPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPA 272

[Close]
BLAST of HG10008254 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 80/179 (44.69%), Postives = 100/179 (55.87%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           M+ AR L++VWG    YW W   P++RF  VA L  VWWLEI G+I+  +LS  T YA Y
Sbjct: 95  MMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAY 154

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
           FVFK   HS YGF   P E ++ +  TE+    V               +P M+    +D
Sbjct: 155 FVFK-WNHSPYGFR-QPVETSLVLADTESTDNVV---------------QPSMI-SLMQD 214

Query: 121 MSGFE--QPQERHDGWFEIELGEFESSDGD-DEIEMSLMEVKGTTDKIGLVVEGIEIRP 177
             G E   P  R DGW+E+ELG+F    GD  EIEMSL E KG  +K GL+V GIEIRP
Sbjct: 215 SGGEEGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255

[Close]
BLAST of HG10008254 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 124.8 bits (312), Expect = 7.2e-29
Identity = 73/182 (40.11%), Postives = 105/182 (57.69%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           M+ A +L++ WG++P  W W   P +RF  VA L  V   EIRGRI+ R++S KT Y+ Y
Sbjct: 132 MISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAY 191

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILG---TENHRKSVCLDPYLNNPRPEYDDEPFMMWPR 120
            V+K + +  YGF+    E  VG++G    E+ R+ +C D        E  DE F    R
Sbjct: 192 IVYKKL-NICYGFENVAVEVVVGVVGQDLEESCRRYICFD--------ETMDEQFRRRDR 251

Query: 121 SEDMSGFEQPQERHDGWFEIELGEFESSDG---DDEIEMSLMEVKGTTDKIGLVVEGIEI 177
            +++    +P+ R DGW EI++GEF +  G   DDEIEM  +E K    K GL+++GIEI
Sbjct: 252 GKNL---VKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEI 301

[Close]
BLAST of HG10008254 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0 

Query: 1   MLGARDLSVVWGDTPFYWTWEHHPDSRFAGVAVLQNVWWLEIRGRISCRMLSHKTTYAIY 60
           ML +++L + WG +P YW W   P+SRF  +A L +V W EIRG+ S R+LS  T Y+ Y
Sbjct: 155 MLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAY 214

Query: 61  FVFKMMRHSYYGFDIDPAEAAVGILGTENHRKSVCLDPYLNNPRPEYDDEPFMMWPRSED 120
            VFK  +    G    P E  +G++G E+ ++ +    Y   PR               +
Sbjct: 215 IVFK-TKDRCPGLGHLPVEVGLGLVGQESSKRFI----YFIGPRDRRG---------RRE 274

Query: 121 MSGFEQPQERHDGWFEIELGEFESSDGDDEIEMSLMEVKGTTDKIGLVVEGIEIRP 177
                +P +R DGW E ELGEF + +  DEIE S++E+K  + K GL+++GIE RP
Sbjct: 275 TRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316

The following BLAST results are available for this feature:
BLAST of HG10008254 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880064.11.6e-7577.97F-box protein PP2-B10-like [Benincasa hispida][more]
XP_038878468.14.8e-7576.84F-box protein PP2-B10-like [Benincasa hispida][more]
XP_022135496.18.1e-6770.22F-box protein PP2-B10-like [Momordica charantia][more]
XP_023530002.13.5e-6267.80F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo][more]
XP_023001982.13.5e-6267.23F-box protein PP2-B10-like [Cucurbita maxima][more]
BLAST of HG10008254 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NPT82.5e-3440.38F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1[more]
Q9ZVQ69.4e-3443.17F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1[more]
Q949S55.3e-2944.69F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1[more]
Q9ZVQ81.0e-2740.11Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1[more]
Q3E6P42.2e-2737.50F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1[more]
BLAST of HG10008254 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C0X73.9e-6770.22F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S... [more]
A0A6J1KI641.7e-6267.23F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111495996 PE=4 SV=1[more]
A0A5D3CDA92.2e-6267.22F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A5A7UT448.5e-6266.48F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A1S3BWQ18.5e-6266.48F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494283 PE=4 SV=1[more]
BLAST of HG10008254 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02230.11.8e-3540.38phloem protein 2-B1 [more]
AT2G02360.16.7e-3543.17phloem protein 2-B10 [more]
AT1G80110.13.8e-3044.69phloem protein 2-B11 [more]
AT2G02340.17.2e-2940.11phloem protein 2-B8 [more]
AT2G02240.11.6e-2837.50F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 1..176
e-value: 6.6E-53
score: 178.7
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 1..178
NoneNo IPR availablePANTHERPTHR32278:SF71SUBFAMILY NOT NAMEDcoord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10008254.1HG10008254.1mRNA