HG10008124 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008124
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Eukaryotic translation initiation factor 6
Location	Chr10: 20040225 .. 20044133 (+)
RNA-Seq Expression	HG10008124
Synteny	HG10008124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGTTGGGGTGCGTGCTTCACCGTGGAGTTTTATACGCTTAACAAATGTGTTTTTTCCCATACTGAGCATGTATGTTATTTTTTTGATTTAGGATGTCTTGTCTATAGAAAGGAACATAATTGAAAATAAAAAATTCATTCGGGGTGGTATTTTTATTAAAACGTGTAATACTCATAATTTAAGATTTTAGTACACATCATAGGGTTATTACTCTAAACCCTAAACATATTAAGGATTGAAACATCTCCATTTCATTTAAATAGTTAATTTGAGTTTTAGTTAAGTTGAATTTTGGGCCAAGAAGAAGTTGAAAAAGATGGGCTTTGACTTGGTCAAGATTAGGGTTTTGATTTTTGTTAAAAATATTATTAAGGGTTTTGACTTTTGTTAAAAATATTAAGAAGTCTTATTTTCTTTTTTAAGCAGCAGCCGTGAACCGTAAATTCTCTCTCCCTCTTACCCGCCCACACGCCCCTCTCATACGCTTCTATCTCTCAAGCTCGCGCATCTGCAAGCCGCTCGCCTCCGTCCAACTGCCGCCACCGTCGACTGGAGTCCGCCGCTGCCTCGCCACCGCTAATGTTCGCTGCCAGTAAGTAGGAATTGTGTTGAGGTTTTTGTCTCTCTCTCTCTCGCTATCTTATTCGGTTCTCTCTCTCCATGGTTCCGTTCACAGCAGGTTCGCCGCCATCGTAAAGTCGCCGCTGTTCGTCCTCGAGCCCCCGCCAAATTCGGTATTGTGCAGTGAGTAAGTCTTTAAGTGGAGTTTTTGGGTTTTTCTTTGATTAATCTTGTTTACCCATTAAATATTTGACCTAAAGTATGTCTTACCCATAAAAACCAATTAGAGGCCACTAATAGAAATGTCAAAATCAGGGTGGACAACTTTTAAAAAATATCTATTATGTAGAGATATTGGTGTTCAGTTTCCTTGAAGATTCCCGAAATCTTCTTAAAGGTCTACAGACCGAGAACGCAATATAACACCAATATCCCTACATGCTAAAAGTGTCCACCCAGATTTCCCGTTTCTATGAGTTGGCTCCTACTTCCTGGTAACTAAAAGTTGGGTGTACTTTTTAAGTTTCGGGTTTAGATTTGAGGTTTTGGGTAGTTTAAGGTCGCTGCCCAGTAAGGGTTGGATCGTTTGGGATGTCTCTGTGAGTGTTTAGGCTTTGGAATCCTTTTAATGTTGTTCTTTATACTGTGTGTATGAGGAAAAAAAAAAGAGATTAGTAACTGTTATTGATCGGGGAGCTTTTGAAACGTTTTGGTAAGTGTTTTTACTGTGCACAAACTGGGTAACACACCGTGGTTCTTTATACAATTGTCTCACATTACTGGATACATCTAACTTCCTTTTACTATGCAGGGGTTGCAAGGGACTTTGAGTTTATAGTCAAGGGAGGCAGTTGTTGATTGTTCAAGGTTATCGTGTGCTACTTATGGCGACCAGTAAGTCTCACAAAGTCTTTCCTTCCATTTTTGTGTATCTTCATTTTACCTATGTTCTGGTTTCTTCTTCGGCTACTTTTATTAAATGCCTTTTTAAGGATGTTCTTTGTGTTTGTGTCACTGTCAACTACAATATTTCTTACATGCTTTTGTTCTTTAGGGCTTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGGTTCTTTCTTTTCCCTTTCCTGTTTCCTTACTGTGTTTCTATCTTTTGAACTGGAAGCAATTTCTCATGAATATTTTTTTTTTATGTTTAGTGCCTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGGTTTGTAAAACTCACTCGCATTTTCTGCATCTTTTAACAGGAGTACCCATTAATTATGTGAGGCCCAGACTACTCATCTTCACGTTTCCATAACATTGTTTTTATTTCTTACTGTAGGAAACAAAAATGGGCTTCTTGTACCACACACCACGACTGACCAAGGCAAGCTTCTTTCTTCTTCTTCTTCTTCTTTTTTCCCCTCCCTATCTTGTCATATTACACCTTTAATTTAATAGTTGGGGTGCATACCTGCTGTACTGCATCTCTTTATCTTTCTTTTATCATGCAAGAGAGTTTTGAATTGGAGGCTAATGGAATTAAAAACAATATGCCCTTCTGTTAAAATTTTTACTTAAATGGTCATTTGCCTTTTTTTGTACTAATGATGTCTGACTCTAGCCATTTAGATTATAAAATTGTAAATGGTTACCACCTTGATCAATAAGAGTCTCGGATTATTCTCATGTATGATTGCATTATGAGTTGAATTATTAAATTCTGAATGTCTACTTGGTGGTTCTATTTTGTGGTGTCGGTGAAGCCTAAACATTTCTTAGGTAATCCTAGTTGTTACTACAAGTTGATAAATGTTGTTATCTTTCAACAGTTCTAGATAAACACGTTGGCTATTGTGTTTTCCACTGCCTCCTCTTATTTCCTTTGTAATATTTTCTTTGAAGTATCTAATCTAATGACCAATTGGTGAATTTTTTTTTTGAGAAATGTATTATATGTTTTTTTTCTAATGAAAAAGGATGAGAAATAAATTACCCACTTGTTTATGAATATAGCAACTGCATCATTATGCAATAATGAATTCATGTCTTGCACATGATGCCTGAAACTGTAAGCATTGTCATTATTAAATGTGTTGTGTTTATACAACTTCCTTAATTGAGGACGCACTGACTTGCACGAAACTCTTCTGGATGTTCTATAATTTATGTTTTTAGGTGATGATGTGTATGGCCAAATTACTTAATTGACATTATATTCCTATTATTTGCGTTTTGAAGAACTTCAGCACTTGAGGAACAGTCTACCAGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGATCGGGTATTTTTTTTACTTCTCCTTCCCACTTCACAGTATTCTTCTAGTGTCACTTTCTGCATCACCATCAGATTGTTTAGCTTGCAATCTTTTGAATAGTGTTCTCCCATTTCAATCTGGACATTTCATATCTCTAATATTCTCGTTCCTAGAAAATGTTCACAAAAGAGCTTGTACTTGCCTTGGAGGCAATAGCTTCTCTTGAGCACATATACAAATGAAAAAATAAAGACAGGACATTGTACAGTATGGACTTTTTAATTGGAGTGTCTTCTTAAAAAAAGTATTCTTTTGCAAATTATACATCTGGAACTTTAGACTGGTTTAGTTCTGTCCTCCATTCATCTTCTTCTACTAAATAATCGAGTTCTTCTCTCATTGATCAGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGGGGTGGCTTGGTAATATTCACCTTCCCTGCTCCTTAACCAAGTGTAGTCTCCATATTGAACTTCATTCCATCATCTTCATGTAAAAAAATTCCCTGAAAGTTGGGATTGTGCAAATATTCTGCAGGTTCATCCACATACATCTGTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTTATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

mRNA sequence

ATGACAAGTTGGGCAGCCGTGAACCGTAAATTCTCTCTCCCTCTTACCCGCCCACACGCCCCTCTCATACGCTTCTATCTCTCAAGCTCGCGCATCTGCAAGCCGCTCGCCTCCGTCCAACTGCCGCCACCGTCGACTGGAGTCCGCCGCTGCCTCGCCACCGCTAATGTTCGCTGCCAGTTCGCCGCCATCGTAAAGTCGCCGCTGTTCGTCCTCGAGCCCCCGCCAAATTCGGTATTGTGCAGGCTTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTGCCTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCACTTGAGGAACAGTCTACCAGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGGGGTGGCTTGGTTCATCCACATACATCTGTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTTATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

Coding sequence (CDS)

ATGACAAGTTGGGCAGCCGTGAACCGTAAATTCTCTCTCCCTCTTACCCGCCCACACGCCCCTCTCATACGCTTCTATCTCTCAAGCTCGCGCATCTGCAAGCCGCTCGCCTCCGTCCAACTGCCGCCACCGTCGACTGGAGTCCGCCGCTGCCTCGCCACCGCTAATGTTCGCTGCCAGTTCGCCGCCATCGTAAAGTCGCCGCTGTTCGTCCTCGAGCCCCCGCCAAATTCGGTATTGTGCAGGCTTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTGCCTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCACTTGAGGAACAGTCTACCAGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGGGGTGGCTTGGTTCATCCACATACATCTGTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTTATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

Protein sequence

MTSWAAVNRKFSLPLTRPHAPLIRFYLSSSRICKPLASVQLPPPSTGVRRCLATANVRCQFAAIVKSPLFVLEPPPNSVLCRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Homology

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BLAST of HG10008124 vs. NCBI nr
Match: XP_038900322.1 (eukaryotic translation initiation factor 6-2 [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 6.5e-117
Identity = 224/242 (92.56%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVK SIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. NCBI nr
Match: XP_038880643.1 (eukaryotic translation initiation factor 6-2-like [Benincasa hispida])

HSP 1 Score: 430.6 bits (1106), Expect = 1.1e-116
Identity = 224/242 (92.56%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVK SIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKASIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 243

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BLAST of HG10008124 vs. NCBI nr
Match: XP_022973842.1 (eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 eukaryotic translation initiation factor 6-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512388.1 eukaryotic translation initiation factor 6-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6571328.1 Eukaryotic translation initiation factor 6-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428.3 bits (1100), Expect = 5.5e-116
Identity = 221/242 (91.32%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. NCBI nr
Match: XP_022931983.1 (eukaryotic translation initiation factor 6-2-like [Cucurbita moschata])

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-115
Identity = 220/242 (90.91%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. NCBI nr
Match: XP_022147757.1 (eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758.1 eukaryotic translation initiation factor 6-2 [Momordica charantia])

HSP 1 Score: 425.6 bits (1093), Expect = 3.6e-115
Identity = 220/242 (90.91%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy Swiss-Prot
Match: Q9M060 (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.8e-109
Identity = 198/242 (81.82%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLC
Sbjct: 4   RLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VAL HTDLD+
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDK 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVA
Sbjct: 124 ETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+
Sbjct: 184 GTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSLIDT 243

[Close]

BLAST of HG10008124 vs. ExPASy Swiss-Prot
Match: Q9TU47 (Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-90
Identity = 170/240 (70.83%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C
Sbjct: 4   RASFENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
                           ELQH+RN LPD V ++R++ERLSALGN   CND+VAL H DLDR
Sbjct: 64  VGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVA
Sbjct: 124 ETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 307
           GTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Sbjct: 184 GTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy Swiss-Prot
Match: P56537 (Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.2e-90
Identity = 170/240 (70.83%), Postives = 189/240 (78.75%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C
Sbjct: 4   RASFENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
                           ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDR
Sbjct: 64  VGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVA
Sbjct: 124 ETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 307
           GTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Sbjct: 184 GTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy Swiss-Prot
Match: O55135 (Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1 SV=2)

HSP 1 Score: 333.2 bits (853), Expect = 3.2e-90
Identity = 169/240 (70.42%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C
Sbjct: 4   RASFENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
                           ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDR
Sbjct: 64  VGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVA
Sbjct: 124 ETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 307
           GTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Sbjct: 184 GTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy Swiss-Prot
Match: Q3KRD8 (Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 9.2e-90
Identity = 168/240 (70.00%), Postives = 189/240 (78.75%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C
Sbjct: 4   RASFENNCEVGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
                           ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDR
Sbjct: 64  VGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVA
Sbjct: 124 ETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 307
           GTVNRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Sbjct: 184 GTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy TrEMBL
Match: A0A6J1I8L9 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111472384 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.7e-116
Identity = 221/242 (91.32%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy TrEMBL
Match: A0A6J1F0A8 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111438315 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.8e-116
Identity = 220/242 (90.91%), Postives = 225/242 (92.98%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy TrEMBL
Match: A0A6J1D392 (Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC111016616 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.7e-115
Identity = 220/242 (90.91%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy TrEMBL
Match: A0A6J1L2F0 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111499780 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.6e-115
Identity = 218/242 (90.08%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL  NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. ExPASy TrEMBL
Match: A0A6J1G8F7 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111451787 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.6e-115
Identity = 218/242 (90.08%), Postives = 223/242 (92.15%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLC
Sbjct: 4   RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVA
Sbjct: 124 ETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAGL  NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDS
Sbjct: 184 GTVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDS 243

[Close]

BLAST of HG10008124 vs. TAIR 10
Match: AT3G55620.1 (Translation initiation factor IF6 )

HSP 1 Score: 394.8 bits (1013), Expect = 6.3e-110
Identity = 198/242 (81.82%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 82  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLC 141
           RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLC
Sbjct: 4   RLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLC 63

Query: 142 A---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDR 201
           A               ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VAL HTDLD+
Sbjct: 64  AGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDK 123

Query: 202 ETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVA 261
           ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVA
Sbjct: 124 ETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVPLVA 183

Query: 262 GTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 309
           GTVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+
Sbjct: 184 GTVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSLIDT 243

[Close]

BLAST of HG10008124 vs. TAIR 10
Match: AT2G39820.1 (Translation initiation factor IF6 )

HSP 1 Score: 303.1 bits (775), Expect = 2.5e-82
Identity = 153/244 (62.70%), Postives = 193/244 (79.10%), Query Frame = 0


Query: 82  RLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGR 141
           RL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG 
Sbjct: 4   RLQYDNNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGS 63

Query: 142 LCA---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDL 201
           LC                ELQHLR+SLPD+VVVQRI+E + ALGN IACND+VAL H  L
Sbjct: 64  LCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKL 123

Query: 202 DRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPL 261
           +++TEE+I+DVLGVEV+RQT+A N LVGSYC+ +N GG+VH +T+VE++ EL+ L+QVPL
Sbjct: 124 EKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPL 183

Query: 262 VAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLI 309
           VAGTVNRGS+VI+AGLT NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLI
Sbjct: 184 VAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSLI 243

The following BLAST results are available for this feature:

BLAST of HG10008124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900322.1	6.5e-117	92.56	eukaryotic translation initiation factor 6-2 [Benincasa hispida]	[more]
XP_038880643.1	1.1e-116	92.56	eukaryotic translation initiation factor 6-2-like [Benincasa hispida]	[more]
XP_022973842.1	5.5e-116	91.32	eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 ...	[more]
XP_022931983.1	1.6e-115	90.91	eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]	[more]
XP_022147757.1	3.6e-115	90.91	eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758...	[more]

BLAST of HG10008124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M060	8.8e-109	81.82	Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9TU47	1.1e-90	70.83	Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV...	[more]
P56537	3.2e-90	70.83	Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 ...	[more]
O55135	3.2e-90	70.42	Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1...	[more]
Q3KRD8	9.2e-90	70.00	Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6...	[more]

BLAST of HG10008124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8L9	2.7e-116	91.32	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F0A8	7.8e-116	90.91	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1D392	1.7e-115	90.91	Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1L2F0	6.6e-115	90.08	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G8F7	6.6e-115	90.08	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of HG10008124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55620.1	6.3e-110	81.82	Translation initiation factor IF6	[more]
AT2G39820.1	2.5e-82	62.70	Translation initiation factor IF6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002769	Translation initiation factor IF6	SMART	SM00654	eIF6neu2	coord: 81..267 e-value: 1.1E-111 score: 387.1
IPR002769	Translation initiation factor IF6	PFAM	PF01912	eIF-6	coord: 82..266 e-value: 3.3E-62 score: 209.4
IPR002769	Translation initiation factor IF6	TIGRFAM	TIGR00323	TIGR00323	coord: 82..287 e-value: 6.2E-70 score: 232.9
IPR002769	Translation initiation factor IF6	PANTHER	PTHR10784	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 81..308
IPR002769	Translation initiation factor IF6	HAMAP	MF_00032	eIF_6	coord: 68..308 score: 117.190849
IPR002769	Translation initiation factor IF6	CDD	cd00527	IF6	coord: 82..286 e-value: 3.89743E-113 score: 324.238
None	No IPR available	GENE3D	3.75.10.10		coord: 79..288 e-value: 1.2E-100 score: 337.4
None	No IPR available	PANTHER	PTHR10784:SF8	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 81..308
None	No IPR available	SUPERFAMILY	55909	Pentein	coord: 81..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008124.1	HG10008124.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902626	assembly of large subunit precursor of preribosome
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity