HG10008109 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008109
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Sterile alpha motif (SAM) domain-containing protein
Location	Chr10: 19923271 .. 19924065 (+)
RNA-Seq Expression	HG10008109
Synteny	HG10008109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPRSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT

Homology

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BLAST of HG10008109 vs. NCBI nr
Match: XP_038879652.1 (uncharacterized protein LOC120071438 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL PDDIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHSHQQ-THNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH+HQQ T N  LLSAFTKTK CLRNCLRKLILPTARP+KG+FRED AVISPEPPT++ 
Sbjct: 61  KSHTHQQPTLNNPLLSAFTKTKICLRNCLRKLILPTARPDKGVFREDTAVISPEPPTLD- 120

Query: 121 EEQEVKVKEVLK-PPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFP 180
              EVKVKEV+K PP+RRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPP MFP
Sbjct: 121 ---EVKVKEVVKPPPKRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPP-MFP 180

Query: 181 RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCR 240
           RSPRTSGPLDGR+SDWALSKSPK+NGPPQGRMM+LIPPSRSPRVSGPLDGRDGSP ICCR
Sbjct: 181 RSPRTSGPLDGRVSDWALSKSPKVNGPPQGRMMKLIPPSRSPRVSGPLDGRDGSPRICCR 240

Query: 241 CNRERIETDDDYHSLWVSLFYDMKPT 265
           CNRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 CNRERMETDDDYHSLWVSLFYDMKPT 261

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BLAST of HG10008109 vs. NCBI nr
Match: KAG6589808.1 (hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445.3 bits (1144), Expect = 3.7e-121
Identity = 218/265 (82.26%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of HG10008109 vs. NCBI nr
Match: KAG7023481.1 (hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.9 bits (1143), Expect = 4.9e-121
Identity = 217/265 (81.89%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP +CCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of HG10008109 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444.9 bits (1143), Expect = 4.9e-121
Identity = 219/265 (82.64%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAVISPEP T  E+
Sbjct: 80  KCDREEATQKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPKICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of HG10008109 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 444.5 bits (1142), Expect = 6.4e-121
Identity = 218/265 (82.26%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of HG10008109 vs. ExPASy TrEMBL
Match: A0A6J1HAF4 (uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC111461567 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121
Identity = 218/265 (82.26%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

[Close]

BLAST of HG10008109 vs. ExPASy TrEMBL
Match: A0A6J1JJY8 (uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.2e-118
Identity = 215/265 (81.13%), Postives = 232/265 (87.55%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSA  KTKNCLRNCLRKLI   A+ EKG+FREDAAVISPEP T  E+
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++ +VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  M PR
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MVPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVS PLDGRDGSP ICCRC
Sbjct: 181 SPRLSGPLDGRVSDWASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGSPRICCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

[Close]

BLAST of HG10008109 vs. ExPASy TrEMBL
Match: A0A5A7U992 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00390 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.3e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of HG10008109 vs. ExPASy TrEMBL
Match: A0A1S3B951 (uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.3e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of HG10008109 vs. ExPASy TrEMBL
Match: A0A5D3CF00 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00280 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.0e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSHAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]

BLAST of HG10008109 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 101/291 (34.71%), Postives = 146/291 (50.17%), Query Frame = 0


Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L  +DI  FNH+FL+ +G+++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  K-------SHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISP- 120
           K       S++H+    K L+S   K    + N          R  K L     AV+ P 
Sbjct: 61  KRETQALSSYNHRPVSAK-LISVVIKATKSVGN----------RLNKWLSLGGTAVVEPL 120

Query: 121 ----EPPTV-----------EEEEQEVKVKEVLKPPRRRSKHVSLSGPLD---GRTHEKF 180
                PP              +   E  V +V + P  + K +  SGPLD   G   +  
Sbjct: 121 KEKQSPPPAYRTGAFLTGNNNKVNAEKAVVQVERLPVIKRKRIVKSGPLDRNHGIQEKMT 180

Query: 181 VMSSKSLKLSGPLDRKERPPLMFP-RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRL 240
           ++S++S+ LSGPLDR  +  L+   RSP  SG LDG +++                  RL
Sbjct: 181 LVSNRSMNLSGPLDRSVQERLILAYRSPIVSGQLDGNLNE------------------RL 240

Query: 241 IPPSRSPRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
                  R+SGPL GR  SP++    N+     DDD  + W ++F+++KPT
Sbjct: 241 -------RLSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

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BLAST of HG10008109 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-18
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 1  MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L  +DI  FNH FLQ++GISIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 K 62
          +
Sbjct: 61 R 61

[Close]

BLAST of HG10008109 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-17
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 3  WFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKS 62
          WFSWLSRT L+P   +EYGL F++N L  +DI  F+H FLQ++GISIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 HSHQQTHNKS-----LLSAFTKTKNCLRNCLRKLI 93
                   S     +++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

The following BLAST results are available for this feature:

BLAST of HG10008109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879652.1	1.4e-131	90.23	uncharacterized protein LOC120071438 [Benincasa hispida]	[more]
KAG6589808.1	3.7e-121	82.26	hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023481.1	4.9e-121	81.89	hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516525.1	4.9e-121	82.64	uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo]	[more]
XP_022960905.1	6.4e-121	82.26	uncharacterized protein LOC111461567 [Cucurbita moschata]	[more]

BLAST of HG10008109 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAF4	3.1e-121	82.26	uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC1114615...	[more]
A0A6J1JJY8	4.2e-118	81.13	uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262...	[more]
A0A5A7U992	2.3e-116	80.36	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3B951	2.3e-116	80.36	uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=...	[more]
A0A5D3CF00	3.0e-116	80.36	Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of HG10008109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G12462.1	7.2e-30	34.71	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con...	[more]
AT1G80520.1	4.8e-18	68.85	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G15760.1	2.4e-17	49.47	Sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 1..70 e-value: 5.0E-10 score: 40.8
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 12..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..209
None	No IPR available	PANTHER	PTHR33915	OSJNBA0033G05.11 PROTEIN	coord: 1..264
None	No IPR available	PANTHER	PTHR33915:SF3	STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN	coord: 1..264
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 2..61 e-value: 7.5556E-9 score: 48.7749

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008109.1	HG10008109.1	mRNA