HG10008095 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008095
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr10: 19664690 .. 19666949 (-)
RNA-Seq Expression	HG10008095
Synteny	HG10008095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTTTCCGGTATGCCCTTTCTTTCTCTGATCATCATCATGCCCTGTTTCTGTTTGTTAAAATGCCTGAAAGGAAAGATTTCTTTGCGTCCATACACTGTTTTTCTTATGTGGGATTTTGCTCGAGACGATGAATCGTCCTTCTTTGAGCTTTGAAAATTAATGGGGTGCCACAGATGGATATGGGTTTTCTAAGTAATTGGCATTTTTGGAAGTGCAATTGGGGTCTATCTTCAAGAACGAAATTTTGGAGAGTTGGGGGAAATAAAGAATGAATGTTAGTTTTTCTTTGCCTTTTTTAAGTATTTCAATTCTACTAGAAGATAAAGGGGGTTGGTATGGGCCTTTTTTAAGGATGCATTCTGTTTCAGAGATGTAGTTTGTTGACCAATCTCAGTCAATTGGCTACTTCAATACCTTTGGAAATTAGCTTTGGTTGGATGCATTTGTGTTCTCTTTCTTTTGATTACATGAAGATTGAGATGTGTTATTCTAGATATCAAGGTGGAGTTGAGTTAATTTTACGCTATAGAACTGATGATTAAGTTAACTCTATTTGCTATGTTTTGAATGATGAAATGGAACATGTTTCGTACTTATTTTGCAGGTATAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGTTTGTACTCTTTTGTTGCTTAAGTGAGTAGGCAAAAGAATACTTTAATCCTTTCCCTTAGTAAGAAAATATTTAAGTCGAATTAAAAATTTGGTCCCTATGATAAGGAGGAAGTTAGAATTTAGTCCTTTCCGTTCGTATGGTTTGATAAGACCTCATAAGTAGTTCTATGGTTTGATAAACCTCTCATAATGGTAGAACTATTTATGAGGGGTTTATCAAACTATAGAGACTAAATTCTAATTATAAACCATATGTACCAAATTTGAATTTAACCAAGCATTTAAGTTAAGTTTTTTCCTTATAGTCAACCACAATCTATTAAACTTAGGTTGTATTGAACCAGCAGGATCGGGGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAGTATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCTACGTCTCATGAAAACCGTGTCAGAACCGTACTTGAAGAACGACCCGCTTTTAAACTTGGTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGGTACCCTTTTTGAAGTTCCTAAACATGGTCGTTTATGTTTTCTCTGGGAGTAATGAGAGTACTTCTCACGATGGCATATTAAATACTTATATGATCTTTAAATGTTGCAAAGATATTTTAGAATTCATACTCTATAAATTATGTGGCTCTCTCCAATCAGATGAAAAGACCTGAAAACCTAAATAATGCTAGAACTAAGTGTTTTGTATGCCACATCTCAAATTAATTAAATTTCAACATTTCTTCTGGTTGGATGACTAGACACCTTGCTTTGAATTAGATTTCGACCCTCTTTGGAATGACTTTCTAAGTGCTTAAGAAAGTCTGTTTTTCAGCATTTAGAAAGCCATTCCACACGGGCCATTGGCGTTCTTTGTGACGTAAATATATTGAATATCAGTTGCCTGTTTTCTTATCTCATTTATTTGCAGTTTTGGTGATTTTAGTACTTGAATTCTGGATAAAGAACAGTCAATTGTGTGGCATGAAATTACAAGGGAAATGTCCTAATAATATAGCATAGACCTGAACCAAGTTGAAATTTTCATCAAGATGAATCCTAATGACTAAATGACGATGAAGTATACAACTATTAGCCTCTCGATGGTGTGCTTTTGCTCTATTGGGGGAAGATAATTGCTTCTTCTAAATTGATGATGTTGTTCTTCTGTATTATCTCAAAATTTGTCTTGATTTTAGAAAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTTCAATTCCTTGGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGAATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACACTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCGAATGTCGAAGATAGAAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTCCCAAAGTCGACGATTCAAAAGGAGGAGAACAGGAATGA

mRNA sequence

ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTTTCCGGTATAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGGGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAGTATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCTACGTCTCATGAAAACCGTGTCAGAACCGTACTTGAAGAACGACCCGCTTTTAAACTTGGTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGAAAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTTCAATTCCTTGGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGAATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACACTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCGAATGTCGAAGATAGAAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTCCCAAAGTCGACGATTCAAAAGGAGGAGAACAGGAATGA

Coding sequence (CDS)

ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTTTCCGGTATAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCGGGGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAGTATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCTACGTCTCATGAAAACCGTGTCAGAACCGTACTTGAAGAACGACCCGCTTTTAAACTTGGTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGAAAGCATTGAGAGCACCTTTTGGGGGCCAGAAAGGATAAGGTTCAATTCCTTGGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGAATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAACACACTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCGAATGTCGAAGATAGAAGCGATCCACCTTGTCCATTGTGCATGGAACCGCCTCCCAAAGTCGACGATTCAAAAGGAGGAGAACAGGAATGA

Protein sequence

MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKGGEQE

Homology

[Close]

BLAST of HG10008095 vs. NCBI nr
Match: XP_038878632.1 (uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108
Identity = 190/204 (93.14%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQMDVRSEEDR  ARPVFMKRSRHQYSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEDRSPARPVFMKRSRHQYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STS ANAS S ENRV+TVLEERPAFK  AHCNSEFPDHIESIE TFWGPERIR+NS GKD
Sbjct: 61  STSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           A SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR
Sbjct: 121 AFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLCMEPPP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCMEPPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. NCBI nr
Match: XP_038878631.1 (uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 190/205 (92.68%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEE-DRGLARPVFMKRSRHQYSHQYCRR 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQMDVRSEE DR  ARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQMDVRSEEQDRSPARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGK 120
           GSTS ANAS S ENRV+TVLEERPAFK  AHCNSEFPDHIESIE TFWGPERIR+NS GK
Sbjct: 61  GSTSHANASMSRENRVKTVLEERPAFKFAAHCNSEFPDHIESIEKTFWGPERIRYNSFGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DA SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED
Sbjct: 121 DAFSSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180

Query: 181 RSDPPCPLCMEPPPKVDDSKGGEQE 205
           RSDPPCPLCMEPPP+VDDSKGGEQE
Sbjct: 181 RSDPPCPLCMEPPPEVDDSKGGEQE 205

[Close]

BLAST of HG10008095 vs. NCBI nr
Match: XP_008443927.1 (PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA0050085.1 uncharacterized protein E6C27_scaffold675G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 186/204 (91.18%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IESIESTF GPERIR+NSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC + PP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. NCBI nr
Match: TYK06338.1 (uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103
Identity = 185/204 (90.69%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IESIESTF GPERIR+NSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC + PP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. NCBI nr
Match: XP_022134599.1 (uncharacterized protein LOC111006826 [Momordica charantia])

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99
Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEED+ LARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGK 120
           GSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFP+HIESIE+TFWGPERIR++SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEPPPKVDDSKGGE 203
           RSDPPCPLC EP  K+DDSKGG+
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQ 203

[Close]

BLAST of HG10008095 vs. ExPASy TrEMBL
Match: A0A5A7U906 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00690 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 186/204 (91.18%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IESIESTF GPERIR+NSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC + PP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. ExPASy TrEMBL
Match: A0A1S3B956 (uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487402 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 186/204 (91.18%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IESIESTF GPERIR+NSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC + PP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. ExPASy TrEMBL
Match: A0A5D3C5B4 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00020 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 185/204 (90.69%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHYSHQYCRRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IESIESTF GPERIR+NSLGKD
Sbjct: 61  STSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPDRIESIESTFRGPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           AISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AISSHLVRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC + PP+VDDSKGGEQE
Sbjct: 181 SDPPCPLCTKLPPEVDDSKGGEQE 204

[Close]

BLAST of HG10008095 vs. ExPASy TrEMBL
Match: A0A6J1BZ68 (uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006826 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 8.8e-100
Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRR 60
           MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEED+ LARPVFMKRSRHQYSHQYCRR
Sbjct: 1   MGKRKRASSDHTHPDPPLHLSGVVPFSNQMDVLSEEDQSLARPVFMKRSRHQYSHQYCRR 60

Query: 61  GSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGK 120
           GSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFP+HIESIE+TFWGPERIR++SLGK
Sbjct: 61  GSTSQANASTSRENRVRTVLEERPAFKFAAHCNSEFPNHIESIENTFWGPERIRYSSLGK 120

Query: 121 DAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVED 180
           DAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VED
Sbjct: 121 DAISSHGVRMLCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHADCLEIRSKVED 180

Query: 181 RSDPPCPLCMEPPPKVDDSKGGE 203
           RSDPPCPLC EP  K+DDSKGG+
Sbjct: 181 RSDPPCPLCTEPSTKIDDSKGGQ 203

[Close]

BLAST of HG10008095 vs. ExPASy TrEMBL
Match: A0A0A0LT71 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 179/204 (87.75%), Postives = 187/204 (91.67%), Query Frame = 0


Query: 1   MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRG 60
           MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH +SHQYC RG
Sbjct: 1   MGKRKRGSDQTHHDPPLHLSGMVPFSNQTDVRSEEDTSLARPIFMKRSRHHHSHQYCWRG 60

Query: 61  STSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPERIRFNSLGKD 120
           STSQANAS S ENRVRTVLEERPAFK  AH NSEFPD IESIESTF  PERIR+NSLGKD
Sbjct: 61  STSQANASASRENRVRTVLEERPAFKFAAHYNSEFPDRIESIESTFREPERIRYNSLGKD 120

Query: 121 AISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDR 180
           A SSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDR
Sbjct: 121 AFSSHVMRMICGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSSVEDR 180

Query: 181 SDPPCPLCMEPPPKVDDSKGGEQE 205
           SDPPCPLC +PPP+VDDSK GEQE
Sbjct: 181 SDPPCPLCTKPPPEVDDSKRGEQE 204

[Close]

BLAST of HG10008095 vs. TAIR 10
Match: AT1G75400.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-12
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 128 RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPL 187
           + VCG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  +   ++ DP CP+
Sbjct: 278 QQVCGACSKLLTER-----SSIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPI 333

Query: 188 C 189
           C
Sbjct: 338 C 333

[Close]

BLAST of HG10008095 vs. TAIR 10
Match: AT1G19680.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 108 GPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYH 167
           G  R+   S  + + S    +  CG C KL+  +     + ++  +LP+ AVL CGHVYH
Sbjct: 250 GRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTER-----SPVARFDLPIPAVLACGHVYH 309

Query: 168 AECLENRSNVEDRSDPPCPLCME 191
           A CLE  +N  ++ DP CP+C E
Sbjct: 310 AACLETMTNETEKYDPTCPICTE 327

[Close]

BLAST of HG10008095 vs. TAIR 10
Match: AT4G39140.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of HG10008095 vs. TAIR 10
Match: AT4G39140.2 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

[Close]

BLAST of HG10008095 vs. TAIR 10
Match: AT4G39140.3 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-11
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 117 LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAE 176
           L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH E
Sbjct: 240 LQRDKIDHHGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNELSVSAILACGHVYHGE 299

Query: 177 CLENRSNVEDRSDPPCPLC 189
           CLE  +   D+ DP CP+C
Sbjct: 300 CLEQMTPEIDKFDPSCPIC 318

The following BLAST results are available for this feature:

BLAST of HG10008095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878632.1	1.6e-108	93.14	uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]	[more]
XP_038878631.1	4.0e-107	92.68	uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]	[more]
XP_008443927.1	1.2e-103	91.18	PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo] >KAA00...	[more]
TYK06338.1	3.5e-103	90.69	uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]	[more]
XP_022134599.1	1.8e-99	87.68	uncharacterized protein LOC111006826 [Momordica charantia]	[more]

BLAST of HG10008095 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10008095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U906	5.9e-104	91.18	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3B956	5.9e-104	91.18	uncharacterized protein LOC103487402 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C5B4	1.7e-103	90.69	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1BZ68	8.8e-100	87.68	uncharacterized protein LOC111006826 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0LT71	2.0e-99	87.75	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G217850 P...	[more]

BLAST of HG10008095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75400.1	3.1e-12	47.54	RING/U-box superfamily protein	[more]
AT1G19680.1	2.0e-11	37.35	RING/U-box superfamily protein	[more]
AT4G39140.1	2.6e-11	41.77	RING/U-box superfamily protein	[more]
AT4G39140.2	2.6e-11	41.77	RING/U-box superfamily protein	[more]
AT4G39140.3	2.6e-11	41.77	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 131..188 e-value: 1.8E-4 score: 30.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 131..188 score: 10.261575
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 128..192 e-value: 2.4E-7 score: 32.5
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 131..186 e-value: 2.0E-5 score: 24.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..72
None	No IPR available	PANTHER	PTHR31150	EXPRESSED PROTEIN	coord: 39..197
None	No IPR available	PANTHER	PTHR31150:SF6	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 39..197
None	No IPR available	CDD	cd16448	RING-H2	coord: 131..189 e-value: 1.9433E-4 score: 35.8907
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 130..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008095.1	HG10008095.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding