HG10008065 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008065
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin-responsive protein
Location	Chr10: 19270725 .. 19271723 (-)
RNA-Seq Expression	HG10008065
Synteny	HG10008065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATGGAGCTTCAACTGGGCCTTGCTTTAATCCCCACCAATCCCAGCAAACCCTTCGACTTATTAAACACCCATCACACCAATCCCCTTTCTTTCGATTTCCATTCCATCACTCACAAAAAGCGTTCTCGTCATTTCGACTCCTCTGCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGACGATGACGACGATTTTAATGACCCCCATTCCGCTTCCTCTAATGATTCGTATGTTAATATCTCCTACCCTCTTTTCTCTCTTTAATTTGGAATTTGATTTTGATTTGATGGGTGAGTTTTTGTTTGGTTGATGTAACAGAGACGAGGAGGAGGAACGGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTCATGCAGAAACGCCTCGGACGGGGCACGGTGATCCGACGTCCGGCGGTGGAGAACGGTGGCGGGTTTTACAGAGGATTGAACTCGAATTATTCTCGATACGTGAAGGTGAAGATGGATGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGCCAACATCATTCTTTTGATGCGCTTAGCTCCACTTTGATGAACATGTTTGGTAATCTAAAATCACTTTTAACCACATTTTCATACTATTAACATTGATTTTGAAAATAACAAAAATGGTTTTAGTCATTTCAGAATCACTGGAAACATACCATTATTTTGGATTTTTCTCTTTTTGTGTACTGATTTTGGGGTTGTTTGGATAACAGATGAAACGGATTCCGACGGTTACAGACTCAAATACCAGAATATCGACGGTGACTGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGCTAAAGATCTCGACATTTTTCATGGATATCAATTTATTTACATGGATTGTTTTAAAAAATTGAGTGGGGGTTTTGATTTTGACAGGGATTTCATCGGAAATGTTCAACGGATCAAACTGGAAAAGAAGAGCGACTGA

mRNA sequence

ATGTCTATGGAGCTTCAACTGGGCCTTGCTTTAATCCCCACCAATCCCAGCAAACCCTTCGACTTATTAAACACCCATCACACCAATCCCCTTTCTTTCGATTTCCATTCCATCACTCACAAAAAGCGTTCTCGTCATTTCGACTCCTCTGCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGACGATGACGACGATTTTAATGACCCCCATTCCGCTTCCTCTAATGATTCAGACGAGGAGGAGGAACGGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTCATGCAGAAACGCCTCGGACGGGGCACGGTGATCCGACGTCCGGCGGTGGAGAACGGTGGCGGGTTTTACAGAGGATTGAACTCGAATTATTCTCGATACGTGAAGGTGAAGATGGATGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGCCAACATCATTCTTTTGATGCGCTTAGCTCCACTTTGATGAACATGTTTGATGAAACGGATTCCGACGGTTACAGACTCAAATACCAGAATATCGACGGTGACTGGTTACTTGCTGAGAACGTAACTTGGAGGGATTTCATCGGAAATGTTCAACGGATCAAACTGGAAAAGAAGAGCGACTGA

Coding sequence (CDS)

ATGTCTATGGAGCTTCAACTGGGCCTTGCTTTAATCCCCACCAATCCCAGCAAACCCTTCGACTTATTAAACACCCATCACACCAATCCCCTTTCTTTCGATTTCCATTCCATCACTCACAAAAAGCGTTCTCGTCATTTCGACTCCTCTGCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGACGATGACGACGATTTTAATGACCCCCATTCCGCTTCCTCTAATGATTCAGACGAGGAGGAGGAACGGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTCATGCAGAAACGCCTCGGACGGGGCACGGTGATCCGACGTCCGGCGGTGGAGAACGGTGGCGGGTTTTACAGAGGATTGAACTCGAATTATTCTCGATACGTGAAGGTGAAGATGGATGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGCCAACATCATTCTTTTGATGCGCTTAGCTCCACTTTGATGAACATGTTTGATGAAACGGATTCCGACGGTTACAGACTCAAATACCAGAATATCGACGGTGACTGGTTACTTGCTGAGAACGTAACTTGGAGGGATTTCATCGGAAATGTTCAACGGATCAAACTGGAAAAGAAGAGCGACTGA

Protein sequence

MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLLLWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDSDGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKSD

Homology

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BLAST of HG10008065 vs. NCBI nr
Match: XP_038879327.1 (auxin-responsive protein IAA29-like [Benincasa hispida])

HSP 1 Score: 379.4 bits (973), Expect = 2.1e-101
Identity = 191/221 (86.43%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHT---NPLSFDFHSITHKKRSRHFDSSAAFRRTL 60
           M+MELQLGLAL PTNP KPFD LNTHH    NPL FDF SITHKKRSR F+ SAAFRRTL
Sbjct: 1   MAMELQLGLALTPTNPIKPFD-LNTHHNNPHNPLCFDFDSITHKKRSRDFNHSAAFRRTL 60

Query: 61  PLLLWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRG 120
           PLLLWNDHPN+ DDDD NDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFM+K +GR 
Sbjct: 61  PLLLWNDHPNDGDDDDSNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMKKHVGRA 120

Query: 121 TVIRRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDE 180
            VIRRP VENGGGFYRGLNSNYSRYVKVKM+GVGIARKVDLSQHHSFDAL +TLMNMFDE
Sbjct: 121 AVIRRPMVENGGGFYRGLNSNYSRYVKVKMEGVGIARKVDLSQHHSFDALRATLMNMFDE 180

Query: 181 TDSDGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           TDSD YRL YQNIDGDWLLAENVTWR+FIG VQR+KLEKKS
Sbjct: 181 TDSDDYRLTYQNIDGDWLLAENVTWRNFIGIVQRMKLEKKS 220

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BLAST of HG10008065 vs. NCBI nr
Match: KGN65132.1 (hypothetical protein Csa_023489 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 4.8e-90
Identity = 170/218 (77.98%), Postives = 190/218 (87.16%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQLGLALIPTNP KPFD LNTH+ NP+S  F SI HKKRSRH DS A FR+TLPLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFD-LNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLL 142

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHPN+ DDDD NDPHSASSNDSDEEEE ENGLVGWPPLKKRRKSLFM++ +GR  VI
Sbjct: 143 LWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVI 202

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPAV+N G F+RGL+ N SRYVKVKM+GVGIARKVDL +HHSFDAL +TLM MFDET+S
Sbjct: 203 RRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNS 262

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           +GY+L +QN  G+WLLAENVTWR+FIG VQRI LEKKS
Sbjct: 263 EGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 299

[Close]

BLAST of HG10008065 vs. NCBI nr
Match: XP_004150206.2 (auxin-responsive protein IAA29 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 4.8e-90
Identity = 170/218 (77.98%), Postives = 190/218 (87.16%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQLGLALIPTNP KPFD LNTH+ NP+S  F SI HKKRSRH DS A FR+TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFD-LNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLL 60

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHPN+ DDDD NDPHSASSNDSDEEEE ENGLVGWPPLKKRRKSLFM++ +GR  VI
Sbjct: 61  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVI 120

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPAV+N G F+RGL+ N SRYVKVKM+GVGIARKVDL +HHSFDAL +TLM MFDET+S
Sbjct: 121 RRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNS 180

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           +GY+L +QN  G+WLLAENVTWR+FIG VQRI LEKKS
Sbjct: 181 EGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 217

[Close]

BLAST of HG10008065 vs. NCBI nr
Match: XP_008443966.1 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 337.4 bits (864), Expect = 9.1e-89
Identity = 173/220 (78.64%), Postives = 193/220 (87.73%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAF-RRTLPL 60
           M+MELQLGLALIPTNP KPFD LNTH+ NP+S  F SI HKKRSRH DSS  F R TLPL
Sbjct: 1   MAMELQLGLALIPTNPIKPFD-LNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPL 60

Query: 61  LLWNDHPNNDDDDDFNDPHSASSNDSD-EEEERENGLVGWPPLKKRRKSLFMQKRLGRGT 120
           LLWNDHPN+ D DD NDP SASSNDSD EEEERENGLVGWPPLKKRRKSLFM++ +GR  
Sbjct: 61  LLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRA 120

Query: 121 VIRRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDET 180
           VIRRPAV+N GGF+RGL+ N SRYVKVKM+GVGIARKVDL +HHSFDAL +TLMNMFDET
Sbjct: 121 VIRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDET 180

Query: 181 DSDGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           +S+GYRL +QN +G+WLLAENVTWR+FIG+VQRIKLEKKS
Sbjct: 181 NSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 219

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BLAST of HG10008065 vs. NCBI nr
Match: XP_023515749.1 (uncharacterized protein LOC111779818 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 3.8e-79
Identity = 157/216 (72.69%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQL LAL PTNP+KPFD LNTHH     FDF SI+ KKR    D S+AFRRTLPLL
Sbjct: 1   MAMELQLSLALFPTNPTKPFD-LNTHHRALPCFDFDSISRKKRPLDIDPSSAFRRTLPLL 60

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHPNNDDDD  NDP+SASSN  +  EE+E  LVGWPPLKKRRK+LF+QKR+GR   I
Sbjct: 61  LWNDHPNNDDDDP-NDPNSASSNHPNNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAI 120

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPA EN GG YR LN N SRYVKVKM+GVGI RKVD+ QHH  DAL +TLMNMFD+ DS
Sbjct: 121 RRPATENDGGVYRELNPNNSRYVKVKMEGVGIGRKVDVRQHHCLDALRATLMNMFDKPDS 180

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEK 217
           DGY L YQ+ DGDWLLAE+VTWRDFI  VQRIKLEK
Sbjct: 181 DGYNLTYQDTDGDWLLAEDVTWRDFIQTVQRIKLEK 214

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BLAST of HG10008065 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 4.0e-15
Identity = 76/250 (30.40%), Postives = 111/250 (44.40%), Query Frame = 0


Query: 3   MELQLGLALIPTNPSK---PFDLLNTH----------HTNPLSFD-FHSITHKKRSRHFD 62
           MEL LGL+L P   SK    FD LN H           T  L F+    + + + + +  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFD-LNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMP 60

Query: 63  SSAAFRRTLPLLLWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKK----- 122
               F         N  PN +D+    DP  + S+   ++EE  + +VGWPP+K      
Sbjct: 61  KQRLF-------ALNGQPNEEDE----DPLESESSIVYDDEEENSEVVGWPPVKTCMIKY 120

Query: 123 --------RRKSLFMQKRLGRGTVIRRPAVEN------GGGFYRGLNSNYSRYVKVKMDG 182
                   R          GR        + N      G      ++S  S YVKVKMDG
Sbjct: 121 GSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDG 180

Query: 183 VGIARKVDLSQHHSFDALSSTLMNMFDE-----TDSDGYRLKYQNIDGDWLLAENVTWRD 215
           V IARKVD+   +S+++L+++L+ MF E      +   Y   +Q  +GDWLL  +VTW+ 
Sbjct: 181 VAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKI 238

[Close]

BLAST of HG10008065 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 46/149 (30.87%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 94  GLVGWPPLKK-RRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSNYSR-----YVKVKM 153
           G+VGWPP+++ R  SLF Q +        +    N     +       +     +VKV M
Sbjct: 111 GVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNM 170

Query: 154 DGVGIARKVDLSQHHSFDALSSTLMNMFDE-----------------TDSDGYRLKYQNI 213
           DG  I RKVDL+ H S+  L+  L  MF +                  +S  Y+L Y++ 
Sbjct: 171 DGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDR 230

Query: 214 DGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           DGDW+L  +V W  F+ +V+R+++ + SD
Sbjct: 231 DGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]

BLAST of HG10008065 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 46/149 (30.87%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 94  GLVGWPPLKK-RRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSNYSR-----YVKVKM 153
           G+VGWPP+++ R  SLF Q +        +    N     +       +     +VKV M
Sbjct: 111 GVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNM 170

Query: 154 DGVGIARKVDLSQHHSFDALSSTLMNMFDE-----------------TDSDGYRLKYQNI 213
           DG  I RKVDL+ H S+  L+  L  MF +                  +S  Y+L Y++ 
Sbjct: 171 DGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDR 230

Query: 214 DGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           DGDW+L  +V W  F+ +V+R+++ + SD
Sbjct: 231 DGDWMLVGDVPWEMFVSSVKRLRIMRTSD 259

[Close]

BLAST of HG10008065 vs. ExPASy Swiss-Prot
Match: Q38829 (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 95  LVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSN----YSRYVKVKMDGV 154
           +VGWPP++  R +  + +   + +    P +E      +  + +     S +VKV MDG+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 155 GIARKVDLSQHHSFDALSSTLMNMF---------DETD-------------SDGYRLKYQ 214
            I RK+DL+ H  +++LS+TL  MF          ETD             S G  L Y+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 215 NIDGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           + +GDW+L  +V W  FIG+V+R+++ K S+
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237

[Close]

BLAST of HG10008065 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-12
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 76  DPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGL 135
           D  S  +   D+   R+  +VGWPP+   R++                     GG     
Sbjct: 57  DDGSCCNTSDDDCRRRKKTVVGWPPVSSARRAC--------------------GG----- 116

Query: 136 NSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMF--------------DETDSD 195
               + YVKVK +G  I RKVDL+ H S+D L++TL  MF              D  D+ 
Sbjct: 117 ----ANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAA 176

Query: 196 GYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKL 215
           G  + Y++ DGDW+L  +V W DF  +V+R+K+
Sbjct: 177 GPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKI 180

[Close]

BLAST of HG10008065 vs. ExPASy TrEMBL
Match: A0A0A0LWC5 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.3e-90
Identity = 170/218 (77.98%), Postives = 190/218 (87.16%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQLGLALIPTNP KPFD LNTH+ NP+S  F SI HKKRSRH DS A FR+TLPLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFD-LNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLL 142

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHPN+ DDDD NDPHSASSNDSDEEEE ENGLVGWPPLKKRRKSLFM++ +GR  VI
Sbjct: 143 LWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVI 202

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPAV+N G F+RGL+ N SRYVKVKM+GVGIARKVDL +HHSFDAL +TLM MFDET+S
Sbjct: 203 RRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNS 262

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           +GY+L +QN  G+WLLAENVTWR+FIG VQRI LEKKS
Sbjct: 263 EGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 299

[Close]

BLAST of HG10008065 vs. ExPASy TrEMBL
Match: A0A1S3B8T8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.4e-89
Identity = 173/220 (78.64%), Postives = 193/220 (87.73%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAF-RRTLPL 60
           M+MELQLGLALIPTNP KPFD LNTH+ NP+S  F SI HKKRSRH DSS  F R TLPL
Sbjct: 1   MAMELQLGLALIPTNPIKPFD-LNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPL 60

Query: 61  LLWNDHPNNDDDDDFNDPHSASSNDSD-EEEERENGLVGWPPLKKRRKSLFMQKRLGRGT 120
           LLWNDHPN+ D DD NDP SASSNDSD EEEERENGLVGWPPLKKRRKSLFM++ +GR  
Sbjct: 61  LLWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRA 120

Query: 121 VIRRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDET 180
           VIRRPAV+N GGF+RGL+ N SRYVKVKM+GVGIARKVDL +HHSFDAL +TLMNMFDET
Sbjct: 121 VIRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDET 180

Query: 181 DSDGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKS 219
           +S+GYRL +QN +G+WLLAENVTWR+FIG+VQRIKLEKKS
Sbjct: 181 NSEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKS 219

[Close]

BLAST of HG10008065 vs. ExPASy TrEMBL
Match: A0A6J1HA19 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 156/216 (72.22%), Postives = 172/216 (79.63%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQL LAL PTNP+KPFD LNTHH      DF SI+ KKR    D S+AFRRTLPLL
Sbjct: 1   MAMELQLSLALFPTNPTKPFD-LNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLL 60

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHPNN DDD  N P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+QKR+GR   I
Sbjct: 61  LWNDHPNNGDDDPKN-PNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAI 120

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPA+EN GG YR LNSN SRYVKVKM+GVGI RKVD+ QHH  DAL +TLMNMFD+ DS
Sbjct: 121 RRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDS 180

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEK 217
           DGY L YQ+ DGDWLLAE+VTWRDFI  VQRIKLEK
Sbjct: 181 DGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEK 214

[Close]

BLAST of HG10008065 vs. ExPASy TrEMBL
Match: A0A6J1JF88 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.0e-77
Identity = 155/216 (71.76%), Postives = 174/216 (80.56%), Query Frame = 0


Query: 1   MSMELQLGLALIPTNPSKPFDLLNTHHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 60
           M+MELQLGLAL PTNP+KPF  LNTHH      DF SI+ KKR    D S+AFRRTLPLL
Sbjct: 79  MAMELQLGLALFPTNPTKPFH-LNTHHRALPCLDFDSISGKKRPLDIDPSSAFRRTLPLL 138

Query: 61  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 120
           LWNDHP ND DDD NDP+SASSN  D  +E+E  LVGWPPLKKRRK+LF+QKR+ R  VI
Sbjct: 139 LWNDHP-NDGDDDPNDPNSASSNHPDNPKEQEIELVGWPPLKKRRKTLFVQKRIRRAVVI 198

Query: 121 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 180
           RRPA+ENGGG +R LNSN S YVKVKM+GVGI RKVD+ QHH FDAL +TLMNMFD+ DS
Sbjct: 199 RRPAMENGGGVHRELNSNNSLYVKVKMEGVGIGRKVDIRQHHCFDALRATLMNMFDKPDS 258

Query: 181 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEK 217
           DGY L YQ+ DGDWLLA++VTWRDFI  VQRIKLEK
Sbjct: 259 DGYNLTYQDTDGDWLLADDVTWRDFIRTVQRIKLEK 292

[Close]

BLAST of HG10008065 vs. ExPASy TrEMBL
Match: A0A6J1I2H3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111469303 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 8.4e-64
Identity = 142/216 (65.74%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 3   MELQLGLALIPTNPSKPFDLLNT--HHTNPLSFDFHSITHKKRSRHFDSSAAFRRTLPLL 62
           MELQLGL+LI   P+KPFDL N+   H      D  S   KKR  H D S+AFRRTLPLL
Sbjct: 1   MELQLGLSLI---PAKPFDLNNSLLLHDTASCLDLTSTIRKKRPLHVDPSSAFRRTLPLL 60

Query: 63  LWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVI 122
           LWNDHPNN DDDD NDPHSAS++  ++E+E +N LVGWPPLKKR+    MQKR GRG   
Sbjct: 61  LWNDHPNNGDDDD-NDPHSASNDSDEDEDEEDNRLVGWPPLKKRKTRSLMQKRRGRG--- 120

Query: 123 RRPAVENGGGFYRGLNSNYSRYVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDETDS 182
            RPAV NGGG     NSN SRYVKVKM+GVGI RKVDLSQ+H FD L +TLM MFD+ D 
Sbjct: 121 -RPAV-NGGGL--NWNSN-SRYVKVKMEGVGIGRKVDLSQYHCFDQLRATLMKMFDKMDP 180

Query: 183 DGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEK 217
           D +RL YQ+IDGDWLLA++VTWR+FIG VQRIKLEK
Sbjct: 181 DSHRLTYQDIDGDWLLADDVTWRNFIGTVQRIKLEK 204

[Close]

BLAST of HG10008065 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 76/250 (30.40%), Postives = 111/250 (44.40%), Query Frame = 0


Query: 3   MELQLGLALIPTNPSK---PFDLLNTH----------HTNPLSFD-FHSITHKKRSRHFD 62
           MEL LGL+L P   SK    FD LN H           T  L F+    + + + + +  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFD-LNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMP 60

Query: 63  SSAAFRRTLPLLLWNDHPNNDDDDDFNDPHSASSNDSDEEEERENGLVGWPPLKK----- 122
               F         N  PN +D+    DP  + S+   ++EE  + +VGWPP+K      
Sbjct: 61  KQRLF-------ALNGQPNEEDE----DPLESESSIVYDDEEENSEVVGWPPVKTCMIKY 120

Query: 123 --------RRKSLFMQKRLGRGTVIRRPAVEN------GGGFYRGLNSNYSRYVKVKMDG 182
                   R          GR        + N      G      ++S  S YVKVKMDG
Sbjct: 121 GSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDG 180

Query: 183 VGIARKVDLSQHHSFDALSSTLMNMFDE-----TDSDGYRLKYQNIDGDWLLAENVTWRD 215
           V IARKVD+   +S+++L+++L+ MF E      +   Y   +Q  +GDWLL  +VTW+ 
Sbjct: 181 VAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTWKI 238

[Close]

BLAST of HG10008065 vs. TAIR 10
Match: AT4G28640.1 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 95  LVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSN----YSRYVKVKMDGV 154
           +VGWPP++  R +  + +   + +    P +E      +  + +     S +VKV MDG+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 155 GIARKVDLSQHHSFDALSSTLMNMF---------DETD-------------SDGYRLKYQ 214
            I RK+DL+ H  +++LS+TL  MF          ETD             S G  L Y+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 215 NIDGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           + +GDW+L  +V W  FIG+V+R+++ K S+
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237

[Close]

BLAST of HG10008065 vs. TAIR 10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 95  LVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSN----YSRYVKVKMDGV 154
           +VGWPP++  R +  + +   + +    P +E      +  + +     S +VKV MDG+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 155 GIARKVDLSQHHSFDALSSTLMNMF---------DETD-------------SDGYRLKYQ 214
            I RK+DL+ H  +++LS+TL  MF          ETD             S G  L Y+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 215 NIDGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           + +GDW+L  +V W  FIG+V+R+++ K S+
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237

[Close]

BLAST of HG10008065 vs. TAIR 10
Match: AT4G28640.3 (indole-3-acetic acid inducible 11 )

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 95  LVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSN----YSRYVKVKMDGV 154
           +VGWPP++  R +  + +   + +    P +E      +  + +     S +VKV MDG+
Sbjct: 89  VVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGI 148

Query: 155 GIARKVDLSQHHSFDALSSTLMNMF---------DETD-------------SDGYRLKYQ 214
            I RK+DL+ H  +++LS+TL  MF          ETD             S G  L Y+
Sbjct: 149 PIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYE 208

Query: 215 NIDGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
           + +GDW+L  +V W  FIG+V+R+++ K S+
Sbjct: 209 DKEGDWMLVGDVPWGMFIGSVRRLRIMKTSE 237

[Close]

BLAST of HG10008065 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 48/169 (28.40%), Postives = 76/169 (44.97%), Query Frame = 0


Query: 81  SSNDSDEEEERENGLVGWPPLKKRRKSLFMQKRLGRGTVIRRPAVENGGGFYRGLNSNYS 140
           SS+       R + +VGWPP+      L     L     ++    E G G  + + ++  
Sbjct: 56  SSSHQGASPPRSSQVVGWPPI-----GLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDEL 115

Query: 141 R--------------YVKVKMDGVGIARKVDLSQHHSFDALSSTLMNMFDE--------- 200
           +              +VKV MDGVGI RKVD+  H S++ L+ TL  MF           
Sbjct: 116 KDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREK 175

Query: 201 -------TDSDGYRLKYQNIDGDWLLAENVTWRDFIGNVQRIKLEKKSD 220
                    S  + L Y++ +GDW+L  +V WR FI +V+R+++   S+
Sbjct: 176 VKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSE 219

The following BLAST results are available for this feature:

BLAST of HG10008065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879327.1	2.1e-101	86.43	auxin-responsive protein IAA29-like [Benincasa hispida]	[more]
KGN65132.1	4.8e-90	77.98	hypothetical protein Csa_023489 [Cucumis sativus]	[more]
XP_004150206.2	4.8e-90	77.98	auxin-responsive protein IAA29 [Cucumis sativus]	[more]
XP_008443966.1	9.1e-89	78.64	PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo]	[more]
XP_023515749.1	3.8e-79	72.69	uncharacterized protein LOC111779818 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10008065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	4.0e-15	30.40	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
A2XB18	2.9e-13	30.87	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	2.9e-13	30.87	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]
Q38829	3.8e-13	31.13	Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=...	[more]
Q6K846	5.5e-12	31.37	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]

BLAST of HG10008065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWC5	2.3e-90	77.98	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1	[more]
A0A1S3B8T8	4.4e-89	78.64	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1	[more]
A0A6J1HA19	1.2e-78	72.22	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461467 PE=3 SV=1	[more]
A0A6J1JF88	1.0e-77	71.76	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485214 PE=3 SV=1	[more]
A0A6J1I2H3	8.4e-64	65.74	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111469303 PE=3 SV=1	[more]

BLAST of HG10008065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	2.9e-16	30.40	indole-3-acetic acid inducible 29	[more]
AT4G28640.1	2.7e-14	31.13	indole-3-acetic acid inducible 11	[more]
AT4G28640.2	2.7e-14	31.13	indole-3-acetic acid inducible 11	[more]
AT4G28640.3	2.7e-14	31.13	indole-3-acetic acid inducible 11	[more]
AT1G04550.2	1.9e-12	28.40	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 180..219 e-value: 6.8E-5 score: 22.8 coord: 41..177 e-value: 1.4E-18 score: 67.7
None	No IPR available	GENE3D	3.10.20.90		coord: 136..219 e-value: 1.6E-20 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..85
None	No IPR available	PANTHER	PTHR31734:SF38	AUXIN-RESPONSIVE PROTEIN IAA20	coord: 3..217
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 133..214
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 3..217
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 140..219 score: 18.434082

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008065.1	HG10008065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003830	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity
molecular_function	GO:0005515	protein binding