HG10007992 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGATGCTAAGAAGCAGTATAGGGACACTCAAGTTGAGGAACGACCCGTTTACAAACCCAATGATATTGAGGGGAGCCCATCAGAATCACGTACATCACAGGACGGTGAGGATGCTCATAGTCATTTTGGTGACTACAAGACTCACGAACATGAGTCTCAGGAGCACAAGACTTATGATCTTGAGACTCACCAACTGAGAGTTGTCCATTCGGAGCCCACGAGGGGCGTAGGTATTCGTAGATCACTCAAGAACTTAGACGATAGGGTATTGTGGGTGTAGAATAAATTAGGGGAAGTCCAGTTAGACTTGTAAGAGGTAAGGTCTGACCTGAGTGAGATGAAGGTTGACATGCAAACCATCACCAGCCTACTTCAAGCATTATGTCAGGTATGTAATATGTCCTAATGTAAGTCTACTAATTTTAGTTTTTGATCTAACGTATTTCTTTAAATCTGTAGGGCAATGGTGTATTGAATGACGATGTCGAGAACATTCAATGTGATTTAGATGAAGATGACCCTAGTTATGAGCCCATTCCTCTAGCACCTATTGAGCTCCGTTCTCCAGCACCCACCCAGCCCCGTTCTCCATCACCCATCGAGCCTGACGAAACACCCATCGAGCCACTTTTGCCAACACCCACCGAACCTGATGAAACACCCACTGAGCCCCATCCGTCAACACCCATCAAGCCTCTTCCTCTAGCACCCATTAAGCCCATTATTCCTTCGGCACCCATTGAGCTCATTCTTCCTTCAGCACTCATTGAGCCCTTTCTTCCTCCAACATCCACCGAGCACCTTATTCCTCCAACATCCACCAAGCCCCTTATTCCTCCAACACCCATTGAGCCCTTTCTTCCTCCAATACCCACCGAACCCCTACCTCTTCTTTCAGCATCCACAAAGCCTTTCGTGATACCACCTCTGCTCCCATCAACCATACAACATCTTGAGCTACTCTCGGTTCCACAATTATTCAAGAGGTTGAAAATTAATGTTAGGGGCTAG ATGTCTGATGCTAAGAAGCAGTATAGGGACACTCAAGTTGAGGAACGACCCGTTTACAAACCCAATGATATTGAGGGGAGCCCATCAGAATCACGTACATCACAGGACGGTGAGGATGCTCATAGTCATTTTGGTGACTACAAGACTCACGAACATGAGTCTCAGGAGCACAAGACTTATGATCTTGAGACTCACCAACTGAGAGTTGTCCATTCGGAGCCCACGAGGGGCGTAGGTATTCGTAGATCACTCAAGAACTTAGACGATAGGGGCAATGGTGTATTGAATGACGATGTCGAGAACATTCAATGTGATTTAGATGAAGATGACCCTAGTTATGAGCCCATTCCTCTAGCACCTATTGAGCTCCGTTCTCCAGCACCCACCCAGCCCCGTTCTCCATCACCCATCGAGCCTGACGAAACACCCATCGAGCCACTTTTGCCAACACCCACCGAACCTGATGAAACACCCACTGAGCCCCATCCGTCAACACCCATCAAGCCTCTTCCTCTAGCACCCATTAAGCCCATTATTCCTTCGGCACCCATTGAGCTCATTCTTCCTTCAGCACTCATTGAGCCCTTTCTTCCTCCAACATCCACCGAGCACCTTATTCCTCCAACATCCACCAAGCCCCTTATTCCTCCAACACCCATTGAGCCCTTTCTTCCTCCAATACCCACCGAACCCCTACCTCTTCTTTCAGCATCCACAAAGCCTTTCGTGATACCACCTCTGCTCCCATCAACCATACAACATCTTGAGCTACTCTCGGTTCCACAATTATTCAAGAGGTTGAAAATTAATGTTAGGGGCTAG ATGTCTGATGCTAAGAAGCAGTATAGGGACACTCAAGTTGAGGAACGACCCGTTTACAAACCCAATGATATTGAGGGGAGCCCATCAGAATCACGTACATCACAGGACGGTGAGGATGCTCATAGTCATTTTGGTGACTACAAGACTCACGAACATGAGTCTCAGGAGCACAAGACTTATGATCTTGAGACTCACCAACTGAGAGTTGTCCATTCGGAGCCCACGAGGGGCGTAGGTATTCGTAGATCACTCAAGAACTTAGACGATAGGGGCAATGGTGTATTGAATGACGATGTCGAGAACATTCAATGTGATTTAGATGAAGATGACCCTAGTTATGAGCCCATTCCTCTAGCACCTATTGAGCTCCGTTCTCCAGCACCCACCCAGCCCCGTTCTCCATCACCCATCGAGCCTGACGAAACACCCATCGAGCCACTTTTGCCAACACCCACCGAACCTGATGAAACACCCACTGAGCCCCATCCGTCAACACCCATCAAGCCTCTTCCTCTAGCACCCATTAAGCCCATTATTCCTTCGGCACCCATTGAGCTCATTCTTCCTTCAGCACTCATTGAGCCCTTTCTTCCTCCAACATCCACCGAGCACCTTATTCCTCCAACATCCACCAAGCCCCTTATTCCTCCAACACCCATTGAGCCCTTTCTTCCTCCAATACCCACCGAACCCCTACCTCTTCTTTCAGCATCCACAAAGCCTTTCGTGATACCACCTCTGCTCCCATCAACCATACAACATCTTGAGCTACTCTCGGTTCCACAATTATTCAAGAGGTTGAAAATTAATGTTAGGGGCTAG MSDAKKQYRDTQVEERPVYKPNDIEGSPSESRTSQDGEDAHSHFGDYKTHEHESQEHKTYDLETHQLRVVHSEPTRGVGIRRSLKNLDDRGNGVLNDDVENIQCDLDEDDPSYEPIPLAPIELRSPAPTQPRSPSPIEPDETPIEPLLPTPTEPDETPTEPHPSTPIKPLPLAPIKPIIPSAPIELILPSALIEPFLPPTSTEHLIPPTSTKPLIPPTPIEPFLPPIPTEPLPLLSASTKPFVIPPLLPSTIQHLELLSVPQLFKRLKINVRG Homology
BLAST of HG10007992 vs. NCBI nr
Match: PIT14970.1 (hypothetical protein BGI32_06510 [Snodgrassella alvi]) HSP 1 Score: 59.7 bits (143), Expect = 4.6e-05 Identity = 59/122 (48.36%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of HG10007992 vs. NCBI nr
Match: XP_014529333.1 (chaperone HSP70 [Blastocystis sp. subtype 4] >KNB45890.1 chaperone HSP70 [Blastocystis sp. subtype 4]) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-04 Identity = 62/164 (37.80%), Postives = 85/164 (51.83%), Query Frame = 0
BLAST of HG10007992 vs. NCBI nr
Match: XP_031676261.1 (uncharacterized protein LOC116371495 [Oncorhynchus kisutch]) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-04 Identity = 70/182 (38.46%), Postives = 88/182 (48.35%), Query Frame = 0
BLAST of HG10007992 vs. NCBI nr
Match: EAX07174.1 (hCG1793893, partial [Homo sapiens]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-04 Identity = 63/149 (42.28%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of HG10007992 vs. NCBI nr
Match: SKC16713.1 (hypothetical protein SAMN06295926_13251, partial [Lysinibacillus sp. AC-3]) HSP 1 Score: 56.2 bits (134), Expect = 5.0e-04 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 0
BLAST of HG10007992 vs. ExPASy TrEMBL
Match: A0A2N9WTM6 (Autotransporter domain-containing protein OS=Snodgrassella alvi OX=1196083 GN=BGI32_06510 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-05 Identity = 59/122 (48.36%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of HG10007992 vs. ExPASy TrEMBL
Match: A0A1T5H7M2 (Uncharacterized protein (Fragment) OS=Lysinibacillus sp. AC-3 OX=1680467 GN=SAMN06295926_13251 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 0
BLAST of HG10007992 vs. ExPASy TrEMBL
Match: A0A7D7LFS1 (FecR domain-containing protein OS=Nostoc edaphicum CCNP1411 OX=1472755 GN=HUN01_18490 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-04 Identity = 60/148 (40.54%), Postives = 72/148 (48.65%), Query Frame = 0
BLAST of HG10007992 vs. ExPASy TrEMBL
Match: A0A2G8T0Z3 (Uncharacterized protein OS=Massilia psychrophila OX=1603353 GN=CR103_11435 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.1e-04 Identity = 50/124 (40.32%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of HG10007992 vs. ExPASy TrEMBL
Match: A0A1T5GTQ3 (Uncharacterized protein (Fragment) OS=Lysinibacillus sp. AC-3 OX=1680467 GN=SAMN06295926_12490 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.1e-04 Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of HG10007992 vs. TAIR 10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein ) HSP 1 Score: 42.0 bits (97), Expect = 9.2e-04 Identity = 54/154 (35.06%), Postives = 69/154 (44.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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