HG10007950 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007950
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Coiled-coil domain-containing protein 9-like
Location	Chr10: 17804992 .. 17807041 (+)
RNA-Seq Expression	HG10007950
Synteny	HG10007950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGATATCCCTGTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCGACCTACCTACCAATCTCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAGATGCTCTTTCCCAATCAAGCCAATTTCTACTTCTAATTTGATTATTGGTAGAAGGAGAACGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGTATCTTTCTCATTCTTTCCCTCCTTTATTTTCCTTCCGTATTTGATGTTTTTCGCCTTGTAATGGAGTTCTTTTTCGTGGGATTTTTGTGATTTTGCTTCTCGTTGATGGAAATGATGATTTCCCTTTTTAATTAGCTTAGCTAGTGTATTGGTAGATTAGTTAGGGTGGATAATTGATATAATTATTGTTAAATTTTATCTTTGAAGGTTGTTTTAAAGGCTTATTCATGAGTTATCATGCCATGTTTTTCCTGCAAATTGTATCTGCCTGCTTGTTCGGCTATGTCTCCATTTCCTATGGAAAGTTATCCATCCTCGAGCATTATAGAAAGTGGGCTGTATCCGTCTTTGAACGAGGGGCATCAACCATCATAATGTTTGCCTATTCACATTGTCACTGATTTCGTGAGAATGGGCCATGGTTTTATGGATTCCACTGGCTGCAAACGTTTTCTTAAATGACATTCAATTTGTCAACCATCATGGATTGACCTAGTGGTAAAAAAAGAGACAAAGTCTCAATATATGGCTAAGAGGTCATGGGTTCAATCCATGGTGACCACCTACCTAGGAATAAATTTCTTACGAGTTTCCTTGACACCCAAATATTGTGGGATTAGTCGAGGTTGCGCGTAAACTGGCCCGGACACTCACGGATATAAAAAAAAAATGACATTCAATTTGTAGTCTGAATGCTTCTGCTCTATATCTGTGATAATTCTTGTTGTTTTTTTATTCTTGCACTGGGTAAATGTTTATTGCACTGTAGTAGTTAAACTGAGATTGGAGGAAGATATTGGCAGTCCTTGAGGCGTTTTTGTGGCAGTTCACAGTGTTGGTGTGGTCTCTTCGAGGCATTTGGCTACAACTTTGCCAGTTCGTAGGATTGCAGGGAGTCAATTGAGAAGTTTCTCCTCCATCCTTTGATCCTCCATCTCGAGAGAAAGGGCTGCTTTTGTGGCAAGCTGGGGTGTGTGTTGGTTTGATGGATTTGTGGGATGAAAGAAATAATAGAATCTTCAGGAGGGATGTTTGAGATAGATTCTTTGTTTCTCTTTGGACTTGGTGTTCAGATTTTTTGTAATTACTTGTTGAGTAACATCTTACTGACTGGAGTCCCTTCTTTTTTGTAGGTTTCTCCTTTTTGTATACTCGTGTATTCTTTTATTTTTTTTCCTTGAAAGTATGGTATTTTCATTAAAAAAAAATAGGATATTGGCACTGGCAGTCCTCATGAATGTTTGTTGGGTAATTTAATAGTTTATATTGGTACGTTGCCTTTTCAGTTTTGGGGGTGTGCAGATTATAATGGATGTTATGGCATTCATTTGACATGTGATGTCTGTTTGTTCAATTTATTTCCTGTTCTGCTGCCGGGTTTCTACATAATGCTTTTGGAAAATTCACATGATATCATTAGCTTGTTCATAAATTTGTCATGAACTCATTAGTAAGGGCACACTTTTTGGTGCTTAATTAAACTTCTAATATGAAACTGTTGATGTTCTTACCAGCAAACTAAATTAGTTAGTAACTAGTAAGAAAATTCTATGAAGTGATTGAGTAGGCTATACCTGGTGTTCTTTTACATTTAATGTTTCTTGACTATTTGGTTGCAGGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCGTTGCCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAG

mRNA sequence

ATGGCGTCGATATCCCTGTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCGACCTACCTACCAATCTCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAGATGCTCTTTCCCAATCAAGCCAATTTCTACTTCTAATTTGATTATTGGTAGAAGGAGAACGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCGTTGCCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAG

Coding sequence (CDS)

ATGGCGTCGATATCCCTGTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCGACCTACCTACCAATCTCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAGATGCTCTTTCCCAATCAAGCCAATTTCTACTTCTAATTTGATTATTGGTAGAAGGAGAACGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCGTTGCCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAG

Protein sequence

MASISLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

Homology

[Close]

BLAST of HG10007950 vs. NCBI nr
Match: XP_038879472.1 (uncharacterized protein LOC120071334 [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66
Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGRQ 60
           MASISLFSSKTLVLPSATYLPISSSST+H+CCFGGCRCSFP KPISTSNLIIGRRRTGRQ
Sbjct: 1   MASISLFSSKTLVLPSATYLPISSSSTNHTCCFGGCRCSFPNKPISTSNLIIGRRRTGRQ 60

Query: 61  VVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120
           VVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE
Sbjct: 61  VVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120

Query: 121 EEKKEEEEENPDKENPDEPEKQ 143
           EEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of HG10007950 vs. NCBI nr
Match: TYK00104.1 (coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 5.2e-61
Identity = 133/143 (93.01%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASISLFSSKTLV PSATYL I SSSSTSHSCC GGCRCSFPIKP+STSNLI GRRRTGR
Sbjct: 67  MASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGR 126

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           QVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 127 QVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 186

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENP+ PE+Q
Sbjct: 187 EEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of HG10007950 vs. NCBI nr
Match: XP_022987895.1 (uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 8.9e-61
Identity = 132/142 (92.96%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGRQ 60
           MASI L SSKTL LPSA YLPISSSSTSHSCCFGGCR SFP KPI TSNLII RRRTGR 
Sbjct: 1   MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRH 60

Query: 61  VVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120
           VVRMAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE
Sbjct: 61  VVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120

Query: 121 EEKKEEEEENPDKENPDEPEKQ 143
           EEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of HG10007950 vs. NCBI nr
Match: KAG6589907.1 (hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.5 bits (615), Expect = 4.4e-60
Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASI L SSKTLVLPSA YLP+ SSSSTSHSCCFGGCR SFP KPISTSNLI+ RRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of HG10007950 vs. NCBI nr
Match: XP_022960823.1 (uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 4.4e-60
Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASI L SSKTLVLPSA YLPI SSSST+HSCCFGGCR SFP KPISTSNLI+ RRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of HG10007950 vs. ExPASy TrEMBL
Match: A0A5D3BLF1 (Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00600 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.5e-61
Identity = 133/143 (93.01%), Postives = 137/143 (95.80%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASISLFSSKTLV PSATYL I SSSSTSHSCC GGCRCSFPIKP+STSNLI GRRRTGR
Sbjct: 67  MASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGR 126

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           QVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 127 QVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 186

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENP+ PE+Q
Sbjct: 187 EEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of HG10007950 vs. ExPASy TrEMBL
Match: A0A6J1JI28 (uncharacterized protein LOC111485300 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485300 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61
Identity = 132/142 (92.96%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGRQ 60
           MASI L SSKTL LPSA YLPISSSSTSHSCCFGGCR SFP KPI TSNLII RRRTGR 
Sbjct: 1   MASICLLSSKTLALPSAAYLPISSSSTSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGRH 60

Query: 61  VVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120
           VVRMAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE
Sbjct: 61  VVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEE 120

Query: 121 EEKKEEEEENPDKENPDEPEKQ 143
           EEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of HG10007950 vs. ExPASy TrEMBL
Match: A0A6J1HA36 (uncharacterized protein LOC111461515 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461515 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASI L SSKTLVLPSA YLPI SSSST+HSCCFGGCR SFP KPISTSNLI+ RRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of HG10007950 vs. ExPASy TrEMBL
Match: A0A5A7TT41 (Histone chaperone ASF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001310 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 132/143 (92.31%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASISLFSSKTLV PSATYL I SSSSTSHSCC GGCRCSFPIKP+STSNLI GRRRTGR
Sbjct: 67  MASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGR 126

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           QVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP PLPCDPPEEDEE
Sbjct: 127 QVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPLPLPCDPPEEDEE 186

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENP+ PE+Q
Sbjct: 187 EEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of HG10007950 vs. ExPASy TrEMBL
Match: A0A1S3CKP8 (uncharacterized protein LOC103501552 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501552 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 132/143 (92.31%), Postives = 136/143 (95.10%), Query Frame = 0


Query: 1   MASISLFSSKTLVLPSATYLPI-SSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGR 60
           MASISLFSSKTLV PSATYL I SSSSTSHSCC GGCRCSFPIKP+STSNLI GRRRTGR
Sbjct: 67  MASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGR 126

Query: 61  QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           QVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLP PLPCDPPEEDEE
Sbjct: 127 QVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPLPLPCDPPEEDEE 186

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENP+ PE+Q
Sbjct: 187 EEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of HG10007950 vs. TAIR 10
Match: AT2G17240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 3.7e-33
Identity = 89/138 (64.49%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 5   SLFSSKTLVLPSATYLPISSSSTSHSCCFGGCRCSFPIKPISTSNLIIGRRRTGRQVVRM 64
           SL S++ L  PS   L   +  +S S    GC  S      S       R R   QVV M
Sbjct: 3   SLCSARFLPSPSLDILSTKTKISSDSRSL-GCSSSRVFAFSSVHRSSSRRNRNQLQVVSM 62

Query: 65  APEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKK 124
           APEEEKLTRRNPLDFPIEWERPKPGRRPDIFP+FSPMKTPLPPP+P DPPEEDEEEEEKK
Sbjct: 63  APEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPPEEDEEEEEKK 122

Query: 125 EEEEENPDKENPDEPEKQ 143
           EEEEENPD+E  ++PEKQ
Sbjct: 123 EEEEENPDQEEEEQPEKQ 139

[Close]

BLAST of HG10007950 vs. TAIR 10
Match: AT3G24506.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink). )

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 78/129 (60.47%), Postives = 95/129 (73.64%), Query Frame = 0


Query: 21  PISSSSTSHSC-----CFGGCRCSFPIKPISTSNLIIGRR-RTGRQVVRMAPEEEKLTRR 80
           P+SSSS + +       F      F    I+     + R+ R   QVV MAPEEEKLTRR
Sbjct: 20  PLSSSSLNRAAPSIFSPFSRINHGFSCSFIAVQRFALSRKTRKQLQVVAMAPEEEKLTRR 79

Query: 81  NPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEE-EENPDK 140
           NPLDFPIEWERPKPGRRPDIFP+FSPMK+PLPPP+P DPPEE+EEEEEKKEEE E++P+K
Sbjct: 80  NPLDFPIEWERPKPGRRPDIFPKFSPMKSPLPPPMPYDPPEEEEEEEEKKEEETEDDPEK 139

Query: 141 ENPDEPEKQ 143
           E+ D+P+ +
Sbjct: 140 EDEDQPDNR 148

The following BLAST results are available for this feature:

BLAST of HG10007950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879472.1	4.1e-66	97.89	uncharacterized protein LOC120071334 [Benincasa hispida]	[more]
TYK00104.1	5.2e-61	93.01	coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa]	[more]
XP_022987895.1	8.9e-61	92.96	uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]	[more]
KAG6589907.1	4.4e-60	92.31	hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960823.1	4.4e-60	92.31	uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]	[more]

BLAST of HG10007950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10007950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLF1	2.5e-61	93.01	Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1JI28	4.3e-61	92.96	uncharacterized protein LOC111485300 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HA36	2.1e-60	92.31	uncharacterized protein LOC111461515 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7TT41	3.6e-60	92.31	Histone chaperone ASF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3CKP8	3.6e-60	92.31	uncharacterized protein LOC103501552 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10007950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17240.1	3.7e-33	64.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G24506.1	1.6e-28	60.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..91
None	No IPR available	PANTHER	PTHR35713:SF4	SUBFAMILY NOT NAMED	coord: 10..140
None	No IPR available	PANTHER	PTHR35713	ARGININE/SERINE-RICH-LIKE SPLICING FACTOR	coord: 10..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007950.1	HG10007950.1	mRNA