HG10007877 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10007877
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	long chain acyl-CoA synthetase 2
Location	Chr10: 16363184 .. 16363585 (-)
RNA-Seq Expression	HG10007877
Synteny	HG10007877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACCTATTGCATCTACAAGGGTTCATCTTTTGGGTTTCGGCATGGGGACATCAGGTTTTTGCTGGTTGATATGCAGGAACTAAAGCCAACAATAGTTTTTGGAGTTCCTAGAGTCTATGATCGTATTTATTATGGAATTCTGAACAAAGTTTCTTTTGGAGGTAGTTTGCGAAAGATGTTATTTGATTATGCATACAATTACAAGATGGGACATCTGAAGAAGGGTCTGCTCCAGGAAAAAGCAGCCCCTCTCTTGGACAGGCTTGTATTTGACAAGATAAAAGAAGCATTTGGTGGAAGAGTTTATCTTAAGTTCTTGAGGATTACTAGTTGTGCAACTTTAAGCCAAGGATATGGCCTTACAGAAAGTTGTGGTGGATGTTTTACATCCATATAG

mRNA sequence

ATGGAGACCTATTGCATCTACAAGGGTTCATCTTTTGGGTTTCGGCATGGGGACATCAGGTTTTTGCTGGTTGATATGCAGGAACTAAAGCCAACAATAGTTTTTGGAGTTCCTAGAGTCTATGATCGTATTTATTATGGAATTCTGAACAAAGTTTCTTTTGGAGGTAGTTTGCGAAAGATGTTATTTGATTATGCATACAATTACAAGATGGGACATCTGAAGAAGGGTCTGCTCCAGGAAAAAGCAGCCCCTCTCTTGGACAGGCTTGTATTTGACAAGATAAAAGAAGCATTTGGTGGAAGAGTTTATCTTAAGTTCTTGAGGATTACTAGTTGTGCAACTTTAAGCCAAGGATATGGCCTTACAGAAAGTTGTGGTGGATGTTTTACATCCATATAG

Coding sequence (CDS)

ATGGAGACCTATTGCATCTACAAGGGTTCATCTTTTGGGTTTCGGCATGGGGACATCAGGTTTTTGCTGGTTGATATGCAGGAACTAAAGCCAACAATAGTTTTTGGAGTTCCTAGAGTCTATGATCGTATTTATTATGGAATTCTGAACAAAGTTTCTTTTGGAGGTAGTTTGCGAAAGATGTTATTTGATTATGCATACAATTACAAGATGGGACATCTGAAGAAGGGTCTGCTCCAGGAAAAAGCAGCCCCTCTCTTGGACAGGCTTGTATTTGACAAGATAAAAGAAGCATTTGGTGGAAGAGTTTATCTTAAGTTCTTGAGGATTACTAGTTGTGCAACTTTAAGCCAAGGATATGGCCTTACAGAAAGTTGTGGTGGATGTTTTACATCCATATAG

Protein sequence

METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYLKFLRITSCATLSQGYGLTESCGGCFTSI

Homology

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BLAST of HG10007877 vs. NCBI nr
Match: TYK13620.1 (long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

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BLAST of HG10007877 vs. NCBI nr
Match: XP_008459243.1 (PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

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BLAST of HG10007877 vs. NCBI nr
Match: KAA0045965.1 (long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

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BLAST of HG10007877 vs. NCBI nr
Match: XP_011649216.1 (long chain acyl-CoA synthetase 2 [Cucumis sativus] >KGN61759.1 hypothetical protein Csa_005961 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 7.3e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYIYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRHVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

[Close]

BLAST of HG10007877 vs. NCBI nr
Match: XP_038901459.1 (long chain acyl-CoA synthetase 2 [Benincasa hispida])

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-56
Identity = 115/146 (78.77%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGS  GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 286 METYCIYKGSCIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAYNYK+G+LKKGLL +KAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 346 MLFDYAYNYKLGYLKKGLLHDKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPSHVEEF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 406 LRVTSCATLSQGYGLTESCGGCFTSI 431

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BLAST of HG10007877 vs. ExPASy Swiss-Prot
Match: M4ISH1 (Probable CoA ligase CCL6 OS=Humulus lupulus OX=3486 GN=CCL6 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.0e-49
Identity = 95/146 (65.07%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E YCIYKGS+ G+  GDIRFL+ D+QELKPTI  GVPRVYDRIY GI +KVS GG+L+K
Sbjct: 281 VENYCIYKGSAIGYWRGDIRFLMDDLQELKPTIFCGVPRVYDRIYAGIFHKVSSGGTLKK 340

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYLKF------------- 120
           MLF YAYNYKM +++KGL   +AAPL+D+L FDKIK+ FGGR+ L F             
Sbjct: 341 MLFQYAYNYKMANMEKGLPHGQAAPLMDKLFFDKIKQGFGGRIRLMFSGAAPLPHHVEEY 400

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCA LSQGYGLTESCGGC TSI
Sbjct: 401 LRVTSCAALSQGYGLTESCGGCLTSI 426

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BLAST of HG10007877 vs. ExPASy Swiss-Prot
Match: Q9XIA9 (Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana OX=3702 GN=LACS2 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.0e-42
Identity = 81/146 (55.48%), Postives = 107/146 (73.29%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           ME Y + +GSS G+  GDIR+L+ D+Q LKPT+  GVPRVYD++Y GI+ K+S  G +RK
Sbjct: 286 MEIYFLSRGSSVGYWRGDIRYLMDDVQALKPTVFCGVPRVYDKLYAGIMQKISASGLIRK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            LFD+AYNYK+G+++KG  QE+A+P LDRL+FDKIKEA GGR ++             +F
Sbjct: 346 KLFDFAYNYKLGNMRKGFSQEEASPRLDRLMFDKIKEALGGRAHMLLSGAAPLPRHVEEF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LRI   + LSQGYGLTESCGG FT++
Sbjct: 406 LRIIPASNLSQGYGLTESCGGSFTTL 431

[Close]

BLAST of HG10007877 vs. ExPASy Swiss-Prot
Match: Q9C7W4 (Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana OX=3702 GN=LACS3 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-32
Identity = 67/146 (45.89%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E  CIY+ +S GF  GD++ L+ D+  LKPT+   VPRV +RIY G+  K+S GG ++K
Sbjct: 286 IEELCIYEAASIGFWRGDVKILIEDIAALKPTVFCAVPRVLERIYTGLQQKLSDGGFVKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            LF++A+ YK  +++KG   E+A+P+ D++VF K+KE  GG V L              F
Sbjct: 346 KLFNFAFKYKHKNMEKGQPHEQASPIADKIVFKKVKEGLGGNVRLILSGAAPLAAHIESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+ +CA + QGYGLTESCGG F SI
Sbjct: 406 LRVVACAHVLQGYGLTESCGGTFVSI 431

[Close]

BLAST of HG10007877 vs. ExPASy Swiss-Prot
Match: Q9T0A0 (Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana OX=3702 GN=LACS4 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E   I  G++ GF  GD++ L+ D+ ELKPTI   VPRV DR+Y G+  K+S GG L+K
Sbjct: 286 IEECFIQHGAAIGFWRGDVKLLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            +FD A++YK G++KKG    +A+PL D+LVF K+K+  GG V +              F
Sbjct: 346 FIFDSAFSYKFGYMKKGQSHVEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+ +C  + QGYGLTESC G F S+
Sbjct: 406 LRVVACCHVLQGYGLTESCAGTFVSL 431

[Close]

BLAST of HG10007877 vs. ExPASy Swiss-Prot
Match: Q9T009 (Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana OX=3702 GN=LACS5 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-29
Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E   I  G S GF  GD++ L+ D+ ELKP+I   VPRV DR+Y G+  K+S GG  +K
Sbjct: 286 IEECIIQVGGSIGFWRGDVKLLIEDLGELKPSIFCAVPRVLDRVYTGLQQKLSGGGFFKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            +FD A++YK G++KKG     A+P  D+LVF+K+K+  GG V +              F
Sbjct: 346 KVFDVAFSYKFGNMKKGQSHVAASPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTS 133
           LR+ +C  + QGYGLTESC G F +
Sbjct: 406 LRVVACCNVLQGYGLTESCAGTFAT 430

[Close]

BLAST of HG10007877 vs. ExPASy TrEMBL
Match: A0A5A7TX35 (Long chain acyl-CoA synthetase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005130 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

[Close]

BLAST of HG10007877 vs. ExPASy TrEMBL
Match: A0A5D3CQ95 (Long chain acyl-CoA synthetase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001240 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

[Close]

BLAST of HG10007877 vs. ExPASy TrEMBL
Match: A0A1S3CAY4 (long chain acyl-CoA synthetase 2 OS=Cucumis melo OX=3656 GN=LOC103498426 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.6e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYTYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRLVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

[Close]

BLAST of HG10007877 vs. ExPASy TrEMBL
Match: A0A0A0LL21 (AMP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G238260 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.5e-57
Identity = 117/146 (80.14%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 284 METYCIYKGSSIGFWRGDIRFLLDDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 343

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 344 MLFDYAYIYKLGYLKKGLLQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRHVEEF 403

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGCFTSI
Sbjct: 404 LRVTSCATLSQGYGLTESCGGCFTSI 429

[Close]

BLAST of HG10007877 vs. ExPASy TrEMBL
Match: A0A6J1JE62 (long chain acyl-CoA synthetase 2 OS=Cucurbita maxima OX=3661 GN=LOC111484205 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.7e-56
Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRK
Sbjct: 286 METYCIYKGSSIGFWRGDIRFLLNDIQELKPTIFSGVPRVYDRIYSGILNKVSSGGSLRK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
           MLFDYAYNYK+G+L KG+ QEKAAPLLD+LVFDKIKEAFGGRV L             +F
Sbjct: 346 MLFDYAYNYKLGYLSKGVPQEKAAPLLDKLVFDKIKEAFGGRVRLFLSGAAPLPRHVEEF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+TSCATLSQGYGLTESCGGC TSI
Sbjct: 406 LRVTSCATLSQGYGLTESCGGCLTSI 431

[Close]

BLAST of HG10007877 vs. TAIR 10
Match: AT1G49430.1 (long-chain acyl-CoA synthetase 2 )

HSP 1 Score: 171.0 bits (432), Expect = 6.4e-43
Identity = 81/146 (55.48%), Postives = 107/146 (73.29%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           ME Y + +GSS G+  GDIR+L+ D+Q LKPT+  GVPRVYD++Y GI+ K+S  G +RK
Sbjct: 286 MEIYFLSRGSSVGYWRGDIRYLMDDVQALKPTVFCGVPRVYDKLYAGIMQKISASGLIRK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            LFD+AYNYK+G+++KG  QE+A+P LDRL+FDKIKEA GGR ++             +F
Sbjct: 346 KLFDFAYNYKLGNMRKGFSQEEASPRLDRLMFDKIKEALGGRAHMLLSGAAPLPRHVEEF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LRI   + LSQGYGLTESCGG FT++
Sbjct: 406 LRIIPASNLSQGYGLTESCGGSFTTL 431

[Close]

BLAST of HG10007877 vs. TAIR 10
Match: AT1G64400.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-33
Identity = 67/146 (45.89%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E  CIY+ +S GF  GD++ L+ D+  LKPT+   VPRV +RIY G+  K+S GG ++K
Sbjct: 286 IEELCIYEAASIGFWRGDVKILIEDIAALKPTVFCAVPRVLERIYTGLQQKLSDGGFVKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            LF++A+ YK  +++KG   E+A+P+ D++VF K+KE  GG V L              F
Sbjct: 346 KLFNFAFKYKHKNMEKGQPHEQASPIADKIVFKKVKEGLGGNVRLILSGAAPLAAHIESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+ +CA + QGYGLTESCGG F SI
Sbjct: 406 LRVVACAHVLQGYGLTESCGGTFVSI 431

[Close]

BLAST of HG10007877 vs. TAIR 10
Match: AT4G23850.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 137.5 bits (345), Expect = 7.8e-33
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E   I  G++ GF  GD++ L+ D+ ELKPTI   VPRV DR+Y G+  K+S GG L+K
Sbjct: 286 IEECFIQHGAAIGFWRGDVKLLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            +FD A++YK G++KKG    +A+PL D+LVF K+K+  GG V +              F
Sbjct: 346 FIFDSAFSYKFGYMKKGQSHVEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTSI 134
           LR+ +C  + QGYGLTESC G F S+
Sbjct: 406 LRVVACCHVLQGYGLTESCAGTFVSL 431

[Close]

BLAST of HG10007877 vs. TAIR 10
Match: AT4G11030.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 0


Query: 1   METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRK 60
           +E   I  G S GF  GD++ L+ D+ ELKP+I   VPRV DR+Y G+  K+S GG  +K
Sbjct: 286 IEECIIQVGGSIGFWRGDVKLLIEDLGELKPSIFCAVPRVLDRVYTGLQQKLSGGGFFKK 345

Query: 61  MLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KF 120
            +FD A++YK G++KKG     A+P  D+LVF+K+K+  GG V +              F
Sbjct: 346 KVFDVAFSYKFGNMKKGQSHVAASPFCDKLVFNKVKQGLGGNVRIILSGAAPLASHIESF 405

Query: 121 LRITSCATLSQGYGLTESCGGCFTS 133
           LR+ +C  + QGYGLTESC G F +
Sbjct: 406 LRVVACCNVLQGYGLTESCAGTFAT 430

[Close]

BLAST of HG10007877 vs. TAIR 10
Match: AT2G47240.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 111.3 bits (277), Expect = 6.0e-25
Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 2   ETYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKM 61
           E Y   KG+S G+ HG++  L  D+QELKPT + GVPRV++RI+ GI   +      R+ 
Sbjct: 284 EEYFFRKGASVGYYHGNLNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRRF 343

Query: 62  LFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYL-------------KFL 121
           +F+  Y +K+  L +G    KA+P+ D + F KI++  GGR+ L             +FL
Sbjct: 344 IFNALYKHKLAWLNRGYSHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSPEIEEFL 403

Query: 122 RITSCATLSQGYGLTESCGG 129
           R+T C  + QGYGLTE+ GG
Sbjct: 404 RVTCCCFVVQGYGLTETLGG 423

The following BLAST results are available for this feature:

BLAST of HG10007877 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13620.1	3.3e-57	80.14	long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa]	[more]
XP_008459243.1	3.3e-57	80.14	PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis melo]	[more]
KAA0045965.1	3.3e-57	80.14	long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa]	[more]
XP_011649216.1	7.3e-57	80.14	long chain acyl-CoA synthetase 2 [Cucumis sativus] >KGN61759.1 hypothetical prot...	[more]
XP_038901459.1	2.1e-56	78.77	long chain acyl-CoA synthetase 2 [Benincasa hispida]	[more]

BLAST of HG10007877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M4ISH1	2.0e-49	65.07	Probable CoA ligase CCL6 OS=Humulus lupulus OX=3486 GN=CCL6 PE=2 SV=1	[more]
Q9XIA9	9.0e-42	55.48	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana OX=3702 GN=LACS2 PE=2 S...	[more]
Q9C7W4	1.7e-32	45.89	Long chain acyl-CoA synthetase 3 OS=Arabidopsis thaliana OX=3702 GN=LACS3 PE=2 S...	[more]
Q9T0A0	1.1e-31	45.21	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana OX=3702 GN=LACS4 PE=2 S...	[more]
Q9T009	1.8e-29	43.45	Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana OX=3702 GN=LACS5 PE=2 S...	[more]

BLAST of HG10007877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TX35	1.6e-57	80.14	Long chain acyl-CoA synthetase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3CQ95	1.6e-57	80.14	Long chain acyl-CoA synthetase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CAY4	1.6e-57	80.14	long chain acyl-CoA synthetase 2 OS=Cucumis melo OX=3656 GN=LOC103498426 PE=4 SV...	[more]
A0A0A0LL21	3.5e-57	80.14	AMP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G238260...	[more]
A0A6J1JE62	8.7e-56	78.08	long chain acyl-CoA synthetase 2 OS=Cucurbita maxima OX=3661 GN=LOC111484205 PE=...	[more]

BLAST of HG10007877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49430.1	6.4e-43	55.48	long-chain acyl-CoA synthetase 2	[more]
AT1G64400.1	1.2e-33	45.89	AMP-dependent synthetase and ligase family protein	[more]
AT4G23850.1	7.8e-33	45.21	AMP-dependent synthetase and ligase family protein	[more]
AT4G11030.1	1.2e-30	43.45	AMP-dependent synthetase and ligase family protein	[more]
AT2G47240.1	6.0e-25	40.00	AMP-dependent synthetase and ligase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 3..130 e-value: 1.0E-9 score: 37.5
IPR042099	ANL, N-terminal domain	GENE3D	3.40.50.12780		coord: 2..133 e-value: 3.6E-6 score: 27.7
None	No IPR available	PANTHER	PTHR43272:SF4	LONG CHAIN ACYL-COA SYNTHETASE 2	coord: 1..133
None	No IPR available	PANTHER	PTHR43272	LONG-CHAIN-FATTY-ACID--COA LIGASE	coord: 1..133
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10007877.1	HG10007877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010143	cutin biosynthetic process
biological_process	GO:0001676	long-chain fatty acid metabolic process
biological_process	GO:0010025	wax biosynthetic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0004467	long-chain fatty acid-CoA ligase activity