Homology
BLAST of HG10007864 vs. NCBI nr
Match:
XP_038880540.1 (rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 805.4 bits (2079), Expect = 2.4e-229
Identity = 409/450 (90.89%), Postives = 429/450 (95.33%), Query Frame = 0
Query: 1 MLSTTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQ 60
MLSTTTTANSLTSLSAAAHTTATFLHPPR S L LFLRRRP ISA +N P PLAAKQQ
Sbjct: 1 MLSTTTTANSLTSLSAAAHTTATFLHPPRDSSLRLFLRRRPNSISATLN--PSPLAAKQQ 60
Query: 61 VYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITG 120
VYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITG
Sbjct: 61 VYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITG 120
Query: 121 ISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIV 180
I+GVQQNIFVVGAQVRESLVQSNN+DPDVIAAFDTSGAELLYE+RL+STEKRAAAA+YIV
Sbjct: 121 ITGVQQNIFVVGAQVRESLVQSNNADPDVIAAFDTSGAELLYEIRLLSTEKRAAAARYIV 180
Query: 181 ENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTV 240
ENRLD KGAQDLARA+KDFPRRRGDKGWECFDY+ PGDCLA+MYYRLSREYNNPSEPRT
Sbjct: 181 ENRLDIKGAQDLARALKDFPRRRGDKGWECFDYEEPGDCLAYMYYRLSREYNNPSEPRTA 240
Query: 241 ALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVM 300
ALE+ALKVVVTEKARDLIVGDLEGKGDG+EG EEEI +RVPVVRMKIGEVAEATTV++
Sbjct: 241 ALEEALKVVVTEKARDLIVGDLEGKGDGKEGVEEEIEVGIRVPVVRMKIGEVAEATTVLV 300
Query: 301 MPVCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAF 360
MPVCKAG+GEKGVGEAPME+RSEGEFGVVV EKEWR+WVVLPGWEPV GL+KGGGVVVAF
Sbjct: 301 MPVCKAGEGEKGVGEAPMELRSEGEFGVVVAEKEWRKWVVLPGWEPVVGLVKGGGVVVAF 360
Query: 361 EDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEM 420
EDARALPWRVNRWYKEEPILVV DR+RKEVVAGDGFYLTG TV GGGELKV+RGNALMEM
Sbjct: 361 EDARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTGATV-GGGELKVQRGNALMEM 420
Query: 421 GVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
GVKESLGTVLLVVRPPKEMEDDQLSDEDWD
Sbjct: 421 GVKESLGTVLLVVRPPKEMEDDQLSDEDWD 447
BLAST of HG10007864 vs. NCBI nr
Match:
TYK28779.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])
HSP 1 Score: 773.9 bits (1997), Expect = 7.8e-220
Identity = 395/451 (87.58%), Postives = 417/451 (92.46%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWFEYAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. NCBI nr
Match:
XP_008462710.1 (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])
HSP 1 Score: 772.7 bits (1994), Expect = 1.7e-219
Identity = 394/451 (87.36%), Postives = 417/451 (92.46%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWF+YAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. NCBI nr
Match:
KAA0062559.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])
HSP 1 Score: 771.2 bits (1990), Expect = 5.1e-219
Identity = 394/451 (87.36%), Postives = 416/451 (92.24%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWFEYAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKV VTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. NCBI nr
Match:
XP_004142574.1 (rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hypothetical protein Csa_007640 [Cucumis sativus])
HSP 1 Score: 762.3 bits (1967), Expect = 2.3e-216
Identity = 389/448 (86.83%), Postives = 414/448 (92.41%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSL+SLS+ AHTT+ FLH PR SPL LFLRRR PISAIINP LAAKQQVY
Sbjct: 4 STITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTPP LEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN F+VGAQVRESL+QSN+SDPDVIA+FDT GAELLYE+RL+STEKRAAAAKYIVEN
Sbjct: 124 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARAMKDFPRRRGDKGWE FDYD GDCLA+MYYRLSREYN+ +E RT AL
Sbjct: 184 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKARDLIVGDLEGKGDG++G EEEIGAAV+VPVVRMKIGEVAEATTVV+MP
Sbjct: 244 EEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEGEFGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAFED
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFED 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 422
AR LPWRVNRWYKEEPILVVADR+R+EVVAGDGFYL GG GGG+LKVERGNALMEMGV
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGG-DGGGDLKVERGNALMEMGV 423
Query: 423 KESLGTVLLVVRPPKEMEDDQLSDEDWD 451
KESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 424 KESLGTVLLVVRPPRETEDDQLSDEDWD 450
BLAST of HG10007864 vs. ExPASy Swiss-Prot
Match:
Q9LKR8 (Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.1 PE=1 SV=1)
HSP 1 Score: 446.8 bits (1148), Expect = 2.9e-124
Identity = 249/449 (55.46%), Postives = 321/449 (71.49%), Query Frame = 0
Query: 11 LTSLSAAAHTTATFLHPPRGSPLHLFLRRRP---KPISAIINPFPP----PLAAKQQVYQ 70
+ SL+A +++ F S H F RP KP + I + P KQQ+YQ
Sbjct: 1 MLSLTATTLSSSIFTQ----SKTHGFFNTRPVYRKPFTTITSALIPASNRQAPPKQQLYQ 60
Query: 71 PFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISG 130
PFRPPPSP+P ++RSLD GK+ VL++RLGLWFEYAPLISSL EGFTPP++EE+TGISG
Sbjct: 61 PFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISG 120
Query: 131 VQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENR 190
V+QN +VGAQVR+SLVQS + P++IAAFDT+GAELLYE+RL++T +R AAA+YIV++
Sbjct: 121 VEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHG 180
Query: 191 LDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALE 250
D+KGA DLARA+KDFP RRGD G FDY+ PGDCL+FM YR SRE+ +PSE RT LE
Sbjct: 181 FDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLE 240
Query: 251 DALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPV 310
AL+ VTEKA+ ++ +L G+ + E EEEI +RVPVVR++ GEVA A++VV++PV
Sbjct: 241 QALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVVVLPV 300
Query: 311 CKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDA 370
CKA +GE+ + EAPME S GEFGVV EK+W RWVVLPGW+PV + K GV V+F D
Sbjct: 301 CKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVSFSDD 360
Query: 371 R-ALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 430
R LPW K E I+VV DR +K V A +G+Y V G +K++RG L E GV
Sbjct: 361 REVLPWN----GKGEAIMVVIDREKKTVEADNGYYY---LVVADGGMKLDRGLVLKEKGV 420
Query: 431 KESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 NESLGMVVLVVRPPRDDDDEWQINDEDWD 434
BLAST of HG10007864 vs. ExPASy Swiss-Prot
Match:
Q9SR19 (Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.2 PE=1 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 3.2e-123
Identity = 236/415 (56.87%), Postives = 307/415 (73.98%), Query Frame = 0
Query: 41 PKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 100
PK SA + P PP A+QQ+YQPFRPP SP+P+Q+RSLD+ GK+ +L+ R+ LWFEYAP
Sbjct: 46 PKRSSANMIPKNPP--ARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAP 105
Query: 101 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 160
LISSL +GFTPPT+EE+TGIS ++QN +VGAQVR+S++QS + +P++I+AFDT GAEL
Sbjct: 106 LISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAEL 165
Query: 161 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 220
LYE+RL+ST +R AAA +I++ +DSKGAQDLARA+KD+P RRGD GW FDY+ PGDCL
Sbjct: 166 LYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCL 225
Query: 221 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL----IVGDLEGKGDGEEGDEEEI 280
+F+YYR SRE NPS+ RT L AL V +EKA++ + GD E + + E+ +EE
Sbjct: 226 SFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEE 285
Query: 281 GAAVRVPVVRMKIGEVAEATTVVMMPVCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWR 340
A+R+PVVR+K GEVAEAT+VV++PVCKA +GEK + EAPME+ + G+F VV EK W+
Sbjct: 286 VKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWK 345
Query: 341 RWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGF 400
RWVVLP W PVA + KGG V +D + LPW KEEP+LVVADR R V A DG+
Sbjct: 346 RWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGY 405
Query: 401 YLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
YL G LK+E+G+ L VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 YLVVAENG----LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449
BLAST of HG10007864 vs. ExPASy Swiss-Prot
Match:
Q7XDY9 (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RAF1 PE=2 SV=1)
HSP 1 Score: 357.1 bits (915), Expect = 3.0e-97
Identity = 213/443 (48.08%), Postives = 283/443 (63.88%), Query Frame = 0
Query: 20 TTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSL 79
TT+ + P G P+ R P + PPP A Q+YQPF PPPSPLP +Y+ L
Sbjct: 44 TTSAVILGPDGRPIGGGPRDNKLPFT------PPPTAPPDQLYQPFHPPPSPLPDKYKDL 103
Query: 80 DAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESL 139
D +L VL +RLGLW EYAPLIS+L +EGFTP ++EE TGISGV+QN VV QVR+SL
Sbjct: 104 DLGQRLAVLRDRLGLWHEYAPLISALSREGFTPSSIEEATGISGVEQNSVVVATQVRDSL 163
Query: 140 VQSNNSDP-DVIAAFDT-SGAELLYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMK 199
V P +++ FD+ G ELLYELR ++ +RA AA++ ++ RL+ +G ++LAR+MK
Sbjct: 164 VADEGGFPAELLRYFDSYGGPELLYELRFLNARQRADAARHAIDRRLEPRGVRELARSMK 223
Query: 200 DFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL 259
DFP+RRGD GWE F D+PGDCLAF +R SRE + +E LE AL+VV TE AR
Sbjct: 224 DFPQRRGDDGWEAFTRDNPGDCLAFARFRQSREAID-AEDSVAELERALEVVDTEPARAR 283
Query: 260 IVGDLE---GKGDGEEGDEEE-----IGAAVR--VPVVRMKIGEVAEATTVVMMPVCKAG 319
+ +L+ K GEE D+E+ AA R VPVVR+ GEVAEATTV+++PV + G
Sbjct: 284 VEAELDRARRKAAGEEVDDEDGAANAAAAASRPAVPVVRLMYGEVAEATTVLLLPVVREG 343
Query: 320 KGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARALP 379
G + + AP R++ + G+V V+K W RW V+PGW PVA + G VV+ D R LP
Sbjct: 344 DGGEALAHAPRRTRTDADLGMVEVDKGWTRWAVVPGWGPVAE-VAGEAVVIELADGRTLP 403
Query: 380 WRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGVKESLG 439
WR + E +LVVA+R R+EVV DG Y+ V G L VE+G L GV E+
Sbjct: 404 WRS---AEAERVLVVANRGRREVVE-DGIYV----VEREGRLVVEKGRKLAAEGVGEAAA 463
Query: 440 TVLLVVRPPKEMEDDQLSDEDWD 451
VL+VVRPP++ EDD +SD++WD
Sbjct: 464 EVLVVVRPPRD-EDDMISDDEWD 469
BLAST of HG10007864 vs. ExPASy Swiss-Prot
Match:
B4FR29 (Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV=1)
HSP 1 Score: 343.2 bits (879), Expect = 4.5e-93
Identity = 199/415 (47.95%), Postives = 272/415 (65.54%), Query Frame = 0
Query: 50 PF-PPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQE 109
PF PPP+A Q+YQPF PPPSPLP R+LD +L +L +R+GLW EYAPLISSL ++
Sbjct: 60 PFTPPPMAPPGQLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRD 119
Query: 110 GFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNS--DPDVIAAFDT-SGAELLYELR 169
GF P +++E TGISGV+QN VV +QVR+SL+ + PD++ FD+ G E+LYELR
Sbjct: 120 GFNPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELR 179
Query: 170 LVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYY 229
++ +RA AA++ + RL+ KG ++LARAMK FPR RG++GWE F DSP DCLAF +
Sbjct: 180 FLNARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARF 239
Query: 230 RLSREYNNPSEPRTVALEDALKVVVTEKARDLIVGDLE---GKGDG-----EEGDEEEIG 289
R SRE + + R LE AL+VV TE R + +LE K G EEG+E++
Sbjct: 240 RQSREAIDVQD-RVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAA 299
Query: 290 AAVR--VPVVRMKIGEVAEATTVVMMPVCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEW 349
A++R V VVR++ GEVAEATTV+++PV + G + AP +++ GVV V++ W
Sbjct: 300 ASLRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAW 359
Query: 350 RRWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDG 409
RW V+PGW PVA VVV D R LPWR++ EEP+LV+A+R++KEVV +G
Sbjct: 360 ARWAVVPGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EG 419
Query: 410 FYLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
Y+ + G L VERG L E G+ + V++VVRPPK+ EDD +SDE+WD
Sbjct: 420 VYV----LEREGRLVVERGKKLAEQGIAAAAAEVVIVVRPPKD-EDDMVSDEEWD 463
BLAST of HG10007864 vs. ExPASy Swiss-Prot
Match:
Q8YLP6 (RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=raf1 PE=1 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 9.8e-24
Identity = 110/389 (28.28%), Postives = 190/389 (48.84%), Query Frame = 0
Query: 67 PPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISGVQQ 126
PP +P P + A+ L L + G W E+ I+SL + G+ P + E TG VQQ
Sbjct: 5 PPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQ 64
Query: 127 NIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENRLDS 186
N +VG+QV SL +S S +A + T G+++LYELRL++ E+RAAA +++D+
Sbjct: 65 NQVIVGSQVYNSLEKSGAS-AATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDA 124
Query: 187 KGAQDLARAMKDFPR-RRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALEDA 246
A+++A+A+KDF R R +G+ + PGD +A+ ++L+R+Y++ E R+ +
Sbjct: 125 DEAREIAKAIKDFSRFRILPEGFS----NHPGDAVAYQAWKLARQYSDLQE-RSRLIARG 184
Query: 247 LKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPVCK 306
L+ +E AR I L + + + P+ + + ++ V +
Sbjct: 185 LRFAHSETARKQIEQLLV---------DFTVVSQRPAPIPPFFRFDTEDELPRIVPVVGQ 244
Query: 307 AGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDARA 366
+ + P+ V F +V E + WV LPGW+ V++A ED
Sbjct: 245 LPLKAEELKAVPL-VEEIEPFRLVKFSGE-QAWVALPGWQ----------VLLAAEDPVT 304
Query: 367 LPWRVNRWYKEE-----PILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEM 426
+ +R+ K+ P+LVV DR+++E D Y V GEL + E
Sbjct: 305 ILATSDRFPKQNQTEPGPVLVVVDRSQRE--WNDFSYF---VVDHDGELDFQWFETKPEF 357
Query: 427 GVKESLGTVLLVVRPPKEMEDDQLSDEDW 450
+ LG V+++VR P+ + D+ ++ + W
Sbjct: 365 PI---LGKVIILVR-PRRILDENVTKDSW 357
BLAST of HG10007864 vs. ExPASy TrEMBL
Match:
A0A5D3DZE4 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001420 PE=4 SV=1)
HSP 1 Score: 773.9 bits (1997), Expect = 3.8e-220
Identity = 395/451 (87.58%), Postives = 417/451 (92.46%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWFEYAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. ExPASy TrEMBL
Match:
A0A1S3CHL8 (rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501013 PE=4 SV=1)
HSP 1 Score: 772.7 bits (1994), Expect = 8.4e-220
Identity = 394/451 (87.36%), Postives = 417/451 (92.46%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWF+YAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. ExPASy TrEMBL
Match:
A0A5A7VA63 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00440 PE=4 SV=1)
HSP 1 Score: 771.2 bits (1990), Expect = 2.4e-219
Identity = 394/451 (87.36%), Postives = 416/451 (92.24%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSLTSLS+ AHTTA FLH P SPL LFLRRR PISAIINP P PLAAKQQVY
Sbjct: 4 STITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWFEYAPLISSL+QEGFTPPTLEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN FVVGAQVRESLVQSN+SDPDVIA+FDTSGAELLYE+RL+STEKR AAAKYIVEN
Sbjct: 124 GVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARA+KDFPRR+GD+GWECFDYDS GDCLA+MYYRLSREYNN SE RT AL
Sbjct: 184 RLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKV VTEKAR+LIVGDLE KGDG++G EEE GA VRVPVVR+KIGEVAEAT VV+MP
Sbjct: 244 EEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEG+FGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAF+D
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFKD 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVG---GGGELKVERGNALME 422
AR LPWRVNRWYKEEPILVVADR+RKEVVAGDGFYL GGTVG GGGELKVERGNAL E
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALTE 423
Query: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
MGVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 424 MGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454
BLAST of HG10007864 vs. ExPASy TrEMBL
Match:
A0A0A0LY43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1)
HSP 1 Score: 762.3 bits (1967), Expect = 1.1e-216
Identity = 389/448 (86.83%), Postives = 414/448 (92.41%), Query Frame = 0
Query: 3 STTTTANSLTSLSAAAHTTATFLHPPRGSPLHLFLRRRPKPISAIINPFPPPLAAKQQVY 62
ST T ANSL+SLS+ AHTT+ FLH PR SPL LFLRRR PISAIINP LAAKQQVY
Sbjct: 4 STITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQQVY 63
Query: 63 QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIS 122
QPFRPPPSPLP QYRSLD EGKLN+LSNRLGLWFEYAPLISSL+QEGFTPP LEEITGIS
Sbjct: 64 QPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEITGIS 123
Query: 123 GVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVEN 182
GVQQN F+VGAQVRESL+QSN+SDPDVIA+FDT GAELLYE+RL+STEKRAAAAKYIVEN
Sbjct: 124 GVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183
Query: 183 RLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVAL 242
RLDSKGAQDLARAMKDFPRRRGDKGWE FDYD GDCLA+MYYRLSREYN+ +E RT AL
Sbjct: 184 RLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRTAAL 243
Query: 243 EDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMP 302
E+ALKVVVTEKARDLIVGDLEGKGDG++G EEEIGAAV+VPVVRMKIGEVAEATTVV+MP
Sbjct: 244 EEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVVVMP 303
Query: 303 VCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFED 362
VCKAG+GEKGVGEAPMEVRSEGEFGVVV EK W RWVVLPGWEPVAGL+KGGGVVVAFED
Sbjct: 304 VCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFED 363
Query: 363 ARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 422
AR LPWRVNRWYKEEPILVVADR+R+EVVAGDGFYL GG GGG+LKVERGNALMEMGV
Sbjct: 364 ARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLMGGG-DGGGDLKVERGNALMEMGV 423
Query: 423 KESLGTVLLVVRPPKEMEDDQLSDEDWD 451
KESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 424 KESLGTVLLVVRPPRETEDDQLSDEDWD 450
BLAST of HG10007864 vs. ExPASy TrEMBL
Match:
A0A6J1F451 (rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439956 PE=4 SV=1)
HSP 1 Score: 680.2 bits (1754), Expect = 5.7e-192
Identity = 361/454 (79.52%), Postives = 396/454 (87.22%), Query Frame = 0
Query: 1 MLSTTTTANSLTSLSAAAHTTATF-LHPPRGSPLHLFLRRRPKPISAIIN--PFPPPLAA 60
MLS T A SL+ +AAAHTT TF LH P PL LFLRR P PISA +N P P PL A
Sbjct: 1 MLSATAPATSLS--AAAAHTTTTFLLHTP---PLRLFLRRPPNPISASLNPSPSPSPLVA 60
Query: 61 KQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEE 120
K QVYQPFRPPPSPLPSQYRSLDA GKL+VL+NRLGLWFEYAPLISSLIQEGFTPPT+EE
Sbjct: 61 KPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIEE 120
Query: 121 ITGISGVQQNIFVVGAQVRESLVQS-NNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAA 180
ITGI GVQQN VVGAQVRESLVQ+ N++DPD+IAAFDT GAELLYE+RL++ EKRAAAA
Sbjct: 121 ITGIGGVQQNTLVVGAQVRESLVQTINDADPDLIAAFDTGGAELLYEIRLLNAEKRAAAA 180
Query: 181 KYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSE 240
+YIVENRLD KGAQDLARAMKDFPRRRGDKGWE F+YD PGDCLAFM+YRLSREY+N SE
Sbjct: 181 RYIVENRLDGKGAQDLARAMKDFPRRRGDKGWESFNYDYPGDCLAFMHYRLSREYSNMSE 240
Query: 241 PRTVALEDALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEAT 300
RT ALEDALKV VTE+AR LIV DLE +G+G++ EEEI A VRVPVVR+KIGEVAEAT
Sbjct: 241 ARTAALEDALKVAVTEEARSLIVRDLEREGEGKDEVEEEIEAGVRVPVVRLKIGEVAEAT 300
Query: 301 TVVMMPVCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGV 360
TVV++PVC +G KGVGEAPMEVRSEGEFGVVV E+ WRRWVVLPGWEP+AGL K GGV
Sbjct: 301 TVVVLPVCNGEEGGKGVGEAPMEVRSEGEFGVVVAEEGWRRWVVLPGWEPIAGLGK-GGV 360
Query: 361 VVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNA 420
VVAF+DARALPWRVNRWYKEE ILVVADR+RKEV AGDGFYLTG T G GELKV+RG+
Sbjct: 361 VVAFKDARALPWRVNRWYKEEAILVVADRSRKEVEAGDGFYLTGAT-GSDGELKVQRGSE 420
Query: 421 LMEMGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 451
LMEMG+KESLGTVLLVVRPPK+M+DDQLSDEDWD
Sbjct: 421 LMEMGLKESLGTVLLVVRPPKDMDDDQLSDEDWD 447
BLAST of HG10007864 vs. TAIR 10
Match:
AT5G28500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 446.8 bits (1148), Expect = 2.0e-125
Identity = 249/449 (55.46%), Postives = 321/449 (71.49%), Query Frame = 0
Query: 11 LTSLSAAAHTTATFLHPPRGSPLHLFLRRRP---KPISAIINPFPP----PLAAKQQVYQ 70
+ SL+A +++ F S H F RP KP + I + P KQQ+YQ
Sbjct: 1 MLSLTATTLSSSIFTQ----SKTHGFFNTRPVYRKPFTTITSALIPASNRQAPPKQQLYQ 60
Query: 71 PFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISG 130
PFRPPPSP+P ++RSLD GK+ VL++RLGLWFEYAPLISSL EGFTPP++EE+TGISG
Sbjct: 61 PFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISG 120
Query: 131 VQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENR 190
V+QN +VGAQVR+SLVQS + P++IAAFDT+GAELLYE+RL++T +R AAA+YIV++
Sbjct: 121 VEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHG 180
Query: 191 LDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALE 250
D+KGA DLARA+KDFP RRGD G FDY+ PGDCL+FM YR SRE+ +PSE RT LE
Sbjct: 181 FDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLE 240
Query: 251 DALKVVVTEKARDLIVGDLEGKGDGEEGDEEEIGAAVRVPVVRMKIGEVAEATTVVMMPV 310
AL+ VTEKA+ ++ +L G+ + E EEEI +RVPVVR++ GEVA A++VV++PV
Sbjct: 241 QALETAVTEKAKKAVLRELHGESEEERVKEEEI-KIIRVPVVRLRFGEVAGASSVVVLPV 300
Query: 311 CKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWRRWVVLPGWEPVAGLMKGGGVVVAFEDA 370
CKA +GE+ + EAPME S GEFGVV EK+W RWVVLPGW+PV + K GV V+F D
Sbjct: 301 CKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVAVSFSDD 360
Query: 371 R-ALPWRVNRWYKEEPILVVADRNRKEVVAGDGFYLTGGTVGGGGELKVERGNALMEMGV 430
R LPW K E I+VV DR +K V A +G+Y V G +K++RG L E GV
Sbjct: 361 REVLPWN----GKGEAIMVVIDREKKTVEADNGYYY---LVVADGGMKLDRGLVLKEKGV 420
Query: 431 KESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 NESLGMVVLVVRPPRDDDDEWQINDEDWD 434
BLAST of HG10007864 vs. TAIR 10
Match:
AT3G04550.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )
HSP 1 Score: 443.4 bits (1139), Expect = 2.3e-124
Identity = 236/415 (56.87%), Postives = 307/415 (73.98%), Query Frame = 0
Query: 41 PKPISAIINPFPPPLAAKQQVYQPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAP 100
PK SA + P PP A+QQ+YQPFRPP SP+P+Q+RSLD+ GK+ +L+ R+ LWFEYAP
Sbjct: 46 PKRSSANMIPKNPP--ARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAP 105
Query: 101 LISSLIQEGFTPPTLEEITGISGVQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAEL 160
LISSL +GFTPPT+EE+TGIS ++QN +VGAQVR+S++QS + +P++I+AFDT GAEL
Sbjct: 106 LISSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQSIH-EPELISAFDTGGAEL 165
Query: 161 LYELRLVSTEKRAAAAKYIVENRLDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCL 220
LYE+RL+ST +R AAA +I++ +DSKGAQDLARA+KD+P RRGD GW FDY+ PGDCL
Sbjct: 166 LYEIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCL 225
Query: 221 AFMYYRLSREYNNPSEPRTVALEDALKVVVTEKARDL----IVGDLEGKGDGEEGDEEEI 280
+F+YYR SRE NPS+ RT L AL V +EKA++ + GD E + + E+ +EE
Sbjct: 226 SFLYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEE 285
Query: 281 GAAVRVPVVRMKIGEVAEATTVVMMPVCKAGKGEKGVGEAPMEVRSEGEFGVVVVEKEWR 340
A+R+PVVR+K GEVAEAT+VV++PVCKA +GEK + EAPME+ + G+F VV EK W+
Sbjct: 286 VKAIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWK 345
Query: 341 RWVVLPGWEPVAGLMKGGGVVVAFEDARALPWRVNRWYKEEPILVVADRNRKEVVAGDGF 400
RWVVLP W PVA + KGG V +D + LPW KEEP+LVVADR R V A DG+
Sbjct: 346 RWVVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGY 405
Query: 401 YLTGGTVGGGGELKVERGNALMEMGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 451
YL G LK+E+G+ L VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 YLVVAENG----LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449
BLAST of HG10007864 vs. TAIR 10
Match:
AT5G28500.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1). )
HSP 1 Score: 285.4 bits (729), Expect = 7.8e-77
Identity = 153/271 (56.46%), Postives = 198/271 (73.06%), Query Frame = 0
Query: 11 LTSLSAAAHTTATFLHPPRGSPLHLFLRRRP---KPISAIINPFPP----PLAAKQQVYQ 70
+ SL+A +++ F S H F RP KP + I + P KQQ+YQ
Sbjct: 1 MLSLTATTLSSSIFTQ----SKTHGFFNTRPVYRKPFTTITSALIPASNRQAPPKQQLYQ 60
Query: 71 PFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGISG 130
PFRPPPSP+P ++RSLD GK+ VL++RLGLWFEYAPLISSL EGFTPP++EE+TGISG
Sbjct: 61 PFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEELTGISG 120
Query: 131 VQQNIFVVGAQVRESLVQSNNSDPDVIAAFDTSGAELLYELRLVSTEKRAAAAKYIVENR 190
V+QN +VGAQVR+SLVQS + P++IAAFDT+GAELLYE+RL++T +R AAA+YIV++
Sbjct: 121 VEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAEYIVDHG 180
Query: 191 LDSKGAQDLARAMKDFPRRRGDKGWECFDYDSPGDCLAFMYYRLSREYNNPSEPRTVALE 250
D+KGA DLARA+KDFP RRGD G FDY+ PGDCL+FM YR SRE+ +PSE RT LE
Sbjct: 181 FDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEIRTTLLE 240
Query: 251 DALKVVVTEKARDLIVGDLEGKGDGEEGDEE 275
AL+ VTEKA+ ++ +L G+ + E G E+
Sbjct: 241 QALETAVTEKAKKAVLRELHGESEEERGKED 266
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038880540.1 | 2.4e-229 | 90.89 | rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida] | [more] |
| TYK28779.1 | 7.8e-220 | 87.58 | rubisco accumulation factor 1 [Cucumis melo var. makuwa] | [more] |
| XP_008462710.1 | 1.7e-219 | 87.36 | PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo] | [more] |
| KAA0062559.1 | 5.1e-219 | 87.36 | rubisco accumulation factor 1 [Cucumis melo var. makuwa] | [more] |
| XP_004142574.1 | 2.3e-216 | 86.83 | rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hyp... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9LKR8 | 2.9e-124 | 55.46 | Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... | [more] |
| Q9SR19 | 3.2e-123 | 56.87 | Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... | [more] |
| Q7XDY9 | 3.0e-97 | 48.08 | Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=... | [more] |
| B4FR29 | 4.5e-93 | 47.95 | Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV... | [more] |
| Q8YLP6 | 9.8e-24 | 28.28 | RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DZE4 | 3.8e-220 | 87.58 | Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A1S3CHL8 | 8.4e-220 | 87.36 | rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350... | [more] |
| A0A5A7VA63 | 2.4e-219 | 87.36 | Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
| A0A0A0LY43 | 1.1e-216 | 86.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1 | [more] |
| A0A6J1F451 | 5.7e-192 | 79.52 | rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=366... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G28500.1 | 2.0e-125 | 55.46 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT3G04550.1 | 2.3e-124 | 56.87 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas... | [more] |
| AT5G28500.2 | 7.8e-77 | 56.46 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
