HG10007857 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007857
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr10: 16078943 .. 16079170 (+)
RNA-Seq ExpressionHG10007857
SyntenyHG10007857
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGAACCTCTTCGAAGGCCTTCCACCGCCGATTTCAGCGACAAACCCTTCGCCGGAGACCCAATTACCAGACGCAGCCACCAATCAAAGTCGGCCCTCTGAACCTTCTACCAATCCCGCCGCTTCTTCTTCTTCTTCTCCGGCGCCGGTCATCAAGAGCGCCCTCAAGCGCCCGAAGACTGCCCAAGAACCCAACCCCGCAGGTCTTCTGTTCTCCTCCTGA

mRNA sequence

ATGGCCGAGAACCTCTTCGAAGGCCTTCCACCGCCGATTTCAGCGACAAACCCTTCGCCGGAGACCCAATTACCAGACGCAGCCACCAATCAAAGTCGGCCCTCTGAACCTTCTACCAATCCCGCCGCTTCTTCTTCTTCTTCTCCGGCGCCGGTCATCAAGAGCGCCCTCAAGCGCCCGAAGACTGCCCAAGAACCCAACCCCGCAGGTCTTCTGTTCTCCTCCTGA

Coding sequence (CDS)

ATGGCCGAGAACCTCTTCGAAGGCCTTCCACCGCCGATTTCAGCGACAAACCCTTCGCCGGAGACCCAATTACCAGACGCAGCCACCAATCAAAGTCGGCCCTCTGAACCTTCTACCAATCCCGCCGCTTCTTCTTCTTCTTCTCCGGCGCCGGTCATCAAGAGCGCCCTCAAGCGCCCGAAGACTGCCCAAGAACCCAACCCCGCAGGTCTTCTGTTCTCCTCCTGA

Protein sequence

MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRPKTAQEPNPAGLLFSS
Homology
BLAST of HG10007857 vs. NCBI nr
Match: XP_038879153.1 (uncharacterized protein LOC120071141 isoform X2 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 6.6e-23
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MAENLFEGLPPPIS TNPSPE QLPDAATNQ+RPS+PSTNPAA SSSSPAPVIKSALKRP
Sbjct: 1  MAENLFEGLPPPISTTNPSPEAQLPDAATNQNRPSDPSTNPAA-SSSSPAPVIKSALKRP 60

Query: 61 KTAQEPNPA 70
          KTAQEPNPA
Sbjct: 61 KTAQEPNPA 68

BLAST of HG10007857 vs. NCBI nr
Match: XP_038879152.1 (uncharacterized protein LOC120071141 isoform X1 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 6.6e-23
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MAENLFEGLPPPIS TNPSPE QLPDAATNQ+RPS+PSTNPAA SSSSPAPVIKSALKRP
Sbjct: 1  MAENLFEGLPPPISTTNPSPEAQLPDAATNQNRPSDPSTNPAA-SSSSPAPVIKSALKRP 60

Query: 61 KTAQEPNPA 70
          KTAQEPNPA
Sbjct: 61 KTAQEPNPA 68

BLAST of HG10007857 vs. NCBI nr
Match: XP_022988130.1 (uncharacterized protein LOC111485467 isoform X1 [Cucurbita maxima] >XP_022988132.1 uncharacterized protein LOC111485467 isoform X1 [Cucurbita maxima])

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MA+NLFEGLPPPISA +PSPETQL DA T Q+RPS+PS NP ASSSS P PVIKSALKRP
Sbjct: 1  MADNLFEGLPPPISAIDPSPETQLYDANTTQNRPSDPSPNPPASSSSCPPPVIKSALKRP 60

Query: 61 KTAQEPNPAG 71
          KTA EPNP G
Sbjct: 61 KTALEPNPTG 70

BLAST of HG10007857 vs. NCBI nr
Match: XP_008462709.1 (PREDICTED: uncharacterized protein LOC103501010 [Cucumis melo] >XP_016902919.1 PREDICTED: uncharacterized protein LOC103501010 [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 3.8e-18
Identity = 59/69 (85.51%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MAENLFEGLPPPISATN  PET LPDA TNQ RPS+PS NP A SSSSPAPVIKSALKRP
Sbjct: 1  MAENLFEGLPPPISATNLLPETLLPDAPTNQIRPSDPSINP-APSSSSPAPVIKSALKRP 60

Query: 61 KTAQEPNPA 70
          KTAQEPN A
Sbjct: 61 KTAQEPNSA 68

BLAST of HG10007857 vs. NCBI nr
Match: XP_022960859.1 (uncharacterized protein LOC111461540 isoform X1 [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 4.9e-18
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MA+NLFEGLPPPISA +P PETQL DA T Q+RPS+PS NP ASSSS P PVIKSALKRP
Sbjct: 1  MADNLFEGLPPPISAIDPLPETQLQDANTTQNRPSDPSPNPPASSSSCPPPVIKSALKRP 60

Query: 61 KTAQEPNPAG 71
          KTA EPNP G
Sbjct: 61 KTALEPNPTG 70

BLAST of HG10007857 vs. ExPASy TrEMBL
Match: A0A6J1JIQ9 (uncharacterized protein LOC111485467 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485467 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.2e-19
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MA+NLFEGLPPPISA +PSPETQL DA T Q+RPS+PS NP ASSSS P PVIKSALKRP
Sbjct: 1  MADNLFEGLPPPISAIDPSPETQLYDANTTQNRPSDPSPNPPASSSSCPPPVIKSALKRP 60

Query: 61 KTAQEPNPAG 71
          KTA EPNP G
Sbjct: 61 KTALEPNPTG 70

BLAST of HG10007857 vs. ExPASy TrEMBL
Match: A0A1S3CHK0 (uncharacterized protein LOC103501010 OS=Cucumis melo OX=3656 GN=LOC103501010 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 59/69 (85.51%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MAENLFEGLPPPISATN  PET LPDA TNQ RPS+PS NP A SSSSPAPVIKSALKRP
Sbjct: 1  MAENLFEGLPPPISATNLLPETLLPDAPTNQIRPSDPSINP-APSSSSPAPVIKSALKRP 60

Query: 61 KTAQEPNPA 70
          KTAQEPN A
Sbjct: 61 KTAQEPNSA 68

BLAST of HG10007857 vs. ExPASy TrEMBL
Match: A0A6J1HCB8 (uncharacterized protein LOC111461540 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461540 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MA+NLFEGLPPPISA +P PETQL DA T Q+RPS+PS NP ASSSS P PVIKSALKRP
Sbjct: 1  MADNLFEGLPPPISAIDPLPETQLQDANTTQNRPSDPSPNPPASSSSCPPPVIKSALKRP 60

Query: 61 KTAQEPNPAG 71
          KTA EPNP G
Sbjct: 61 KTALEPNPTG 70

BLAST of HG10007857 vs. ExPASy TrEMBL
Match: A0A6J1JLD5 (uncharacterized protein LOC111485467 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485467 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-18
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MA+NLFEGLPPPISA +PSPETQL DA T Q+RPS+PS NP ASSSS P PVIKSALKRP
Sbjct: 1  MADNLFEGLPPPISAIDPSPETQLYDANTTQNRPSDPSPNPPASSSSCPPPVIKSALKRP 60

Query: 61 KTAQEPNP 69
          KTA EPNP
Sbjct: 61 KTALEPNP 68

BLAST of HG10007857 vs. ExPASy TrEMBL
Match: A0A0A0M0Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690250 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17
Identity = 56/69 (81.16%), Postives = 57/69 (82.61%), Query Frame = 0

Query: 1  MAENLFEGLPPPISATNPSPETQLPDAATNQSRPSEPSTNPAASSSSSPAPVIKSALKRP 60
          MAENLFEGLPPPISATN SPETQLPDA TNQ RPS+PSTN        PAPVIKSALKRP
Sbjct: 1  MAENLFEGLPPPISATNLSPETQLPDAPTNQIRPSDPSTN--------PAPVIKSALKRP 60

Query: 61 KTAQEPNPA 70
          KTAQEPN A
Sbjct: 61 KTAQEPNSA 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038879153.16.6e-2392.75uncharacterized protein LOC120071141 isoform X2 [Benincasa hispida][more]
XP_038879152.16.6e-2392.75uncharacterized protein LOC120071141 isoform X1 [Benincasa hispida][more]
XP_022988130.11.7e-1880.00uncharacterized protein LOC111485467 isoform X1 [Cucurbita maxima] >XP_022988132... [more]
XP_008462709.13.8e-1885.51PREDICTED: uncharacterized protein LOC103501010 [Cucumis melo] >XP_016902919.1 P... [more]
XP_022960859.14.9e-1878.57uncharacterized protein LOC111461540 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JIQ98.2e-1980.00uncharacterized protein LOC111485467 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CHK01.8e-1885.51uncharacterized protein LOC103501010 OS=Cucumis melo OX=3656 GN=LOC103501010 PE=... [more]
A0A6J1HCB82.4e-1878.57uncharacterized protein LOC111461540 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JLD54.0e-1880.88uncharacterized protein LOC111485467 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A0A0M0Y51.2e-1781.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690250 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007857.1HG10007857.1mRNA