Homology
BLAST of HG10007827 vs. NCBI nr
Match:
XP_038880759.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Benincasa hispida])
HSP 1 Score: 1121.7 bits (2900), Expect = 0.0e+00
Identity = 558/581 (96.04%), Postives = 568/581 (97.76%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPLSKPTIP+SHSDSLVTRKF NKTHLRNGASSAESREPHF NLHN
Sbjct: 1 MFSSEFLPQSLHFTNPLSKPTIPRSHSDSLVTRKFSNKTHLRNGASSAESREPHFSNLHN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA+RVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQIESAN+VFDRMR RGFSPDVVTYNIMIG LCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIESANKVFDRMRSRGFSPDVVTYNIMIGCLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAVEFV+ LSARGCNPD ISYNILLRSFLNKSRW DGEKLMKDMVL
Sbjct: 241 AIIRGICKEGMEDRAVEFVQGLSARGCNPDVISYNILLRSFLNKSRWADGEKLMKDMVLI 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISSLCREGRV EAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSLCREGRVGEAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS G KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT+FQPT
Sbjct: 421 LWSCGKKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATNFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC+PN+TSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCVPNKTSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
+LYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQ+
Sbjct: 541 ALYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQT 581
BLAST of HG10007827 vs. NCBI nr
Match:
KAA0038402.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 566/581 (97.42%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLD+VGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDQVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. NCBI nr
Match:
TYJ96990.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1114.0 bits (2880), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 565/581 (97.25%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+ HFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSFHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. NCBI nr
Match:
XP_008443759.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Cucumis melo])
HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 565/581 (97.25%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KL LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLALAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. NCBI nr
Match:
XP_004142590.1 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Cucumis sativus] >KGN66736.1 hypothetical protein Csa_007448 [Cucumis sativus])
HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 542/581 (93.29%), Postives = 558/581 (96.04%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPL+KPTIPQS SDS+ +F NKTHLRN SSAE R+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLRNVTSSAEFRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA+RVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPDVVTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL+SRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRA++FVR LSARGCNPD +SYNILLRSFLNKSRWEDGE+LMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPD+YSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALD+FEKLDEVGCPP V +YNTMFSA
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT FQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI DSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 731.5 bits (1887), Expect = 7.5e-210
Identity = 352/555 (63.42%), Postives = 440/555 (79.28%), Query Frame = 0
Query: 11 LHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHNRDAHLMKLLN 70
L F+N S P S S + T + E R+ H +L RD ++K+ +
Sbjct: 40 LTFSN--SNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFH 99
Query: 71 RSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYGDPD 130
RSCR+G + ESL+ LE++V KG+ PDV+LCTKLIKGFF RN+ KAVRVMEILE +G PD
Sbjct: 100 RSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 159
Query: 131 VYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190
V++YNA+I+GF K N+I+ A +V DRMR + FSPD VTYNIMIGSLCSRGKL+LA +V++
Sbjct: 160 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 219
Query: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEG 250
+LL D C+P+VITYTILIEAT+LEG ++EAL+L DE+LSRGL+PD++TYN IIRG+CKEG
Sbjct: 220 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 279
Query: 251 MEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHS 310
M DRA E VR L +GC PD ISYNILLR+ LN+ +WE+GEKLM M C+PNVVT+S
Sbjct: 280 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 339
Query: 311 ILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSD 370
ILI++LCR+G++ EA+N+LK+MKEKGLTPDAYSYDPLI+AFC+EGRLD+AIE+L M+SD
Sbjct: 340 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 399
Query: 371 GCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKA 430
GCLPDIVNYNT+LATLCK G AD AL+IF KL EVGC PN SSYNTMFSALWSSG+KI+A
Sbjct: 400 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 459
Query: 431 LEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNIVLLG 490
L MI EM+ GIDPDEITYNS+ISCLCR+G+VDEA LLVDM + F P+V+++NIVLLG
Sbjct: 460 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 519
Query: 491 MCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICE 550
CK HR+ + I +L +MV GC PNET+Y +LIEGI +AG+R EAMELAN L R+ I E
Sbjct: 520 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 579
Query: 551 DSSKRLNKTFPMLDV 566
S KRL++TFP+L+V
Sbjct: 580 YSFKRLHRTFPLLNV 592
BLAST of HG10007827 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 1.3e-129
Identity = 223/489 (45.60%), Postives = 322/489 (65.85%), Query Frame = 0
Query: 69 LNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYGD 128
L + R G+ E FLE++V G PD++ CT LI+GF +KA +++EILE G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 129 -PDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFE 188
PDV +YN MISG+ KA +I +A V DRM + SPDVVTYN ++ SLC GKL+ A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 228
Query: 189 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGIC 248
V+D +L+ C P VITYTILIEAT + + A++L DE+ RG PD+ TYN ++ GIC
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288
Query: 249 KEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVV 308
KEG D A++F+ ++ + GC P+ I++NI+LRS + RW D EKL+ DM+ G P+VV
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348
Query: 309 THSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKM 368
T +ILI+ LCR+G + A+++L+ M + G P++ SY+PL+ FCKE ++D AIEYL +M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408
Query: 369 VSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNK 428
VS GC PDIV YNT+L LCK G + A++I +L GC P + +YNT+ L +G
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468
Query: 429 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNIV 488
KA++++ EM K + PD ITY+SL+ L R+G VDEAI + E +P ++FN +
Sbjct: 469 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 528
Query: 489 LLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGV 548
+LG+CK + I+ L+ M+ +GC PNETSY +LIEG+AY G EA+EL N L G+
Sbjct: 529 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 588
Query: 549 ICEDSSKRL 557
+ + S++++
Sbjct: 589 MKKSSAEQV 594
BLAST of HG10007827 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 4.1e-83
Identity = 173/487 (35.52%), Postives = 278/487 (57.08%), Query Frame = 0
Query: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG-DPDVYSYNAM 138
++S LES+V+ G KP+V T+L+ + LKKA+RV+E++ + G PD +Y +
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 139 ISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGC 198
++ K + A Q+ ++M G+ + VTYN ++ LC G L + + ++ L++ G
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 199 KPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEGMEDRAVE 258
P+ TY+ L+EA E +EA++L DE++ +G P+L +YN ++ G CKEG D A+
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 259 FVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHSILISSLC 318
REL A+G + +SYNILLR RWE+ L+ +M P+VVT++ILI+SL
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 319 REGRVREAVNVLKVMKEKG--LTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSDGCLPD 378
GR +A+ VLK M + A SY+P+I+ CKEG++DL ++ L +M+ C P+
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 379 IVNYNTILATLCKFGS-ADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKALEMI 438
YN I +LC+ S A I + L Y ++ ++L GN A +++
Sbjct: 388 EGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 447
Query: 439 SEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM-EATSFQPTVISFNIVLLGMCK 498
EM R G DPD TY++LI LC +G+ A+ +L M E+ + +PTV +FN ++LG+CK
Sbjct: 448 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 507
Query: 499 VHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICEDSS 558
+ R +E+ MVEK +PNET+Y +L+EGIA+ A E+ + L VI +++
Sbjct: 508 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 567
Query: 559 KRLNKTF 561
R+ F
Sbjct: 568 DRIVMQF 573
BLAST of HG10007827 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 1.1e-75
Identity = 152/523 (29.06%), Postives = 265/523 (50.67%), Query Frame = 0
Query: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG 127
L+ CRA + ++ LE + S G PD T +++G+ +L A+R+ E + +G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 128 -------------------------------------DPDVYSYNAMISGFSKANQIESA 187
PD Y++N +++G KA ++ A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 188 NQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 247
++ D M G+ PDV TYN +I LC G+++ A EV+D+++ C P+ +TY LI
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 248 TILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEGMEDRAVEFVRELSARGCNPD 307
E ++ EA EL L S+G+ PD+ T+N++I+G+C A+E E+ ++GC PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 308 AISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHSILISSLCREGRVREAVNVLK 367
+YN+L+ S +K + ++ ++K M LSGC +V+T++ LI C+ + REA +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 368 VMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSDGCLPDIVNYNTILATLCKFG 427
M+ G++ ++ +Y+ LI CK R++ A + + +M+ +G PD YN++L C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 428 SADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKALEMISEMIRKGIDPDEITYN 487
A DI + + GC P++ +Y T+ S L +G A +++ + KGI+ YN
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 488 SLISCLCRDGLVDEAIGLLVDM-EATSFQPTVISFNIVLLGMCK-VHRVFEGIELLITMV 547
+I L R EAI L +M E P +S+ IV G+C + E ++ L+ ++
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 548 EKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICED 552
EKG +P +S +L EG+ ++L N + + E+
Sbjct: 675 EKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEE 717
BLAST of HG10007827 vs. ExPASy Swiss-Prot
Match:
Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)
HSP 1 Score: 279.6 bits (714), Expect = 7.8e-74
Identity = 141/480 (29.38%), Postives = 258/480 (53.75%), Query Frame = 0
Query: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG 127
L+N CR + +L L ++ G++P++V + L+ G+ +S+ + +AV +++ + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 128 -DPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAF 187
P+ ++N +I G N+ A + DRM +G PD+VTY +++ LC RG +LAF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 188 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGI 247
+++++ + +P V+ Y +I+ +++AL LF E+ ++G+RP++ TY+++I +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 248 CKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNV 307
C G A + ++ R NPD +++ L+ +F+ + + + EKL +MV +P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 308 VTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHK 367
VT+S LI+ C R+ EA + + M K PD +Y+ LI FCK R++ +E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 368 MVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGN 427
M G + + V YN ++ L + G D+A +IF+++ G PPN+ +YNT+ L +G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 428 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNI 487
KA+ + + R ++P TYN +I +C+ G V++ L ++ +P V+++N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 488 VLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLG 547
++ G C+ E L M E G LPN Y LI G R + EL + G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
BLAST of HG10007827 vs. ExPASy TrEMBL
Match:
A0A5A7T4J1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002930 PE=4 SV=1)
HSP 1 Score: 1114.4 bits (2881), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 566/581 (97.42%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLD+VGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDQVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. ExPASy TrEMBL
Match:
A0A5D3BAX6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00380 PE=4 SV=1)
HSP 1 Score: 1114.0 bits (2880), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 565/581 (97.25%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+ HFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSFHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. ExPASy TrEMBL
Match:
A0A1S3B9K3 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487275 PE=4 SV=1)
HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 554/581 (95.35%), Postives = 565/581 (97.25%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPLSKPTIPQSHSDS+ TR+F NKT+LRN SSAESR+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLSKPTIPQSHSDSIPTRRFSNKTYLRNVTSSAESRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPD+VTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDIVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KL LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN
Sbjct: 181 KLALAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRAV+FVR+LSARGCNPD +SYNILLRSFLNKSRWEDGEKLMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRAVDFVRDLSARGCNPDVVSYNILLRSFLNKSRWEDGEKLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLDKMVSDGCLPDIVNYNTILATLCKFGCADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCPPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI EDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. ExPASy TrEMBL
Match:
A0A0A0M3C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666460 PE=4 SV=1)
HSP 1 Score: 1092.8 bits (2825), Expect = 0.0e+00
Identity = 542/581 (93.29%), Postives = 558/581 (96.04%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSEFLPQ+LHFTNPL+KPTIPQS SDS+ +F NKTHLRN SSAE R+PHFPNL N
Sbjct: 1 MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLRNVTSSAEFRQPHFPNLDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA+RVM
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQI+SANQVFDRMR RGFSPDVVTYNIMIGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL+SRGLRPDLYTYN
Sbjct: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMEDRA++FVR LSARGCNPD +SYNILLRSFLNKSRWEDGE+LMKDMVLS
Sbjct: 241 AIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISS CREGRVREAVNVL+VMKEKGLTPD+YSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYL KMVSDGCLPDIVNYNTILATLCKFG ADLALD+FEKLDEVGCPP V +YNTMFSA
Sbjct: 361 IEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEAT FQPT
Sbjct: 421 LWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLGMCK HRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 582
SLYRLGVI DSSKRLNKTFPMLDVYKGLSLSESKNQLLQS
Sbjct: 541 SLYRLGVISGDSSKRLNKTFPMLDVYKGLSLSESKNQLLQS 581
BLAST of HG10007827 vs. ExPASy TrEMBL
Match:
A0A6J1H8M7 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461503 PE=4 SV=1)
HSP 1 Score: 1047.0 bits (2706), Expect = 3.0e-302
Identity = 520/571 (91.07%), Postives = 542/571 (94.92%), Query Frame = 0
Query: 1 MFSSEFLPQNLHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHN 60
MFSSE L Q+LHF NPLS PTIPQSHS S TR+FPNKTHLRNGASSAE+REPH P L N
Sbjct: 1 MFSSELLSQSLHFINPLSNPTIPQSHSSSF-TRRFPNKTHLRNGASSAETREPHDPILDN 60
Query: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVM 120
R+ HLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKA+RVM
Sbjct: 61 RETHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 121 EILETYGDPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRG 180
EILETYGDPDVYSYNAMISGFSKANQIESAN+VFDRMR RGFSPDVVTYNI+IGSLCSRG
Sbjct: 121 EILETYGDPDVYSYNAMISGFSKANQIESANKVFDRMRRRGFSPDVVTYNILIGSLCSRG 180
Query: 181 KLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYN 240
KLELA+EV+DELLKDGC+PSVITYTILIEATIL+GRI EAL+L DELLSRGLRPD YTYN
Sbjct: 181 KLELAYEVLDELLKDGCEPSVITYTILIEATILDGRIREALKLLDELLSRGLRPDRYTYN 240
Query: 241 AIIRGICKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLS 300
AIIRGICKEGMED+AVEFVR+L ARGCNPD ISYNILLRS LNKSRW DGE+LMKDMV S
Sbjct: 241 AIIRGICKEGMEDQAVEFVRDLLARGCNPDVISYNILLRSLLNKSRWGDGERLMKDMVSS 300
Query: 301 GCEPNVVTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLA 360
GCEPNVVTHSILISSLCREGRV EAVNVLKVMK+KGLTPDAYSYDPLISAFCKEGRLDLA
Sbjct: 301 GCEPNVVTHSILISSLCREGRVEEAVNVLKVMKQKGLTPDAYSYDPLISAFCKEGRLDLA 360
Query: 361 IEYLHKMVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
IEYLHKMVSDGCLPDIVNYN+ILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA
Sbjct: 361 IEYLHKMVSDGCLPDIVNYNSILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSA 420
Query: 421 LWSSGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
LWS GNKIKALEMISEMI KGID DEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT
Sbjct: 421 LWSCGNKIKALEMISEMIGKGIDADEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPT 480
Query: 481 VISFNIVLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELAN 540
VISFNIVLLG+CK HRVFEGIELL TMVEKGC PNETSYVLLIEGIAYAGWR EAMELAN
Sbjct: 481 VISFNIVLLGLCKAHRVFEGIELLTTMVEKGCQPNETSYVLLIEGIAYAGWRAEAMELAN 540
Query: 541 SLYRLGVICEDSSKRLNKTFPMLDVYKGLSL 572
+LYR+GVICE+SSKRLNK FPML+VYKGLSL
Sbjct: 541 ALYRMGVICEESSKRLNKIFPMLEVYKGLSL 570
BLAST of HG10007827 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 731.5 bits (1887), Expect = 5.3e-211
Identity = 352/555 (63.42%), Postives = 440/555 (79.28%), Query Frame = 0
Query: 11 LHFTNPLSKPTIPQSHSDSLVTRKFPNKTHLRNGASSAESREPHFPNLHNRDAHLMKLLN 70
L F+N S P S S + T + E R+ H +L RD ++K+ +
Sbjct: 40 LTFSN--SNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSLGFRDTQMLKIFH 99
Query: 71 RSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYGDPD 130
RSCR+G + ESL+ LE++V KG+ PDV+LCTKLIKGFF RN+ KAVRVMEILE +G PD
Sbjct: 100 RSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 159
Query: 131 VYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190
V++YNA+I+GF K N+I+ A +V DRMR + FSPD VTYNIMIGSLCSRGKL+LA +V++
Sbjct: 160 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 219
Query: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEG 250
+LL D C+P+VITYTILIEAT+LEG ++EAL+L DE+LSRGL+PD++TYN IIRG+CKEG
Sbjct: 220 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 279
Query: 251 MEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHS 310
M DRA E VR L +GC PD ISYNILLR+ LN+ +WE+GEKLM M C+PNVVT+S
Sbjct: 280 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 339
Query: 311 ILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSD 370
ILI++LCR+G++ EA+N+LK+MKEKGLTPDAYSYDPLI+AFC+EGRLD+AIE+L M+SD
Sbjct: 340 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 399
Query: 371 GCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKA 430
GCLPDIVNYNT+LATLCK G AD AL+IF KL EVGC PN SSYNTMFSALWSSG+KI+A
Sbjct: 400 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 459
Query: 431 LEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNIVLLG 490
L MI EM+ GIDPDEITYNS+ISCLCR+G+VDEA LLVDM + F P+V+++NIVLLG
Sbjct: 460 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 519
Query: 491 MCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICE 550
CK HR+ + I +L +MV GC PNET+Y +LIEGI +AG+R EAMELAN L R+ I E
Sbjct: 520 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 579
Query: 551 DSSKRLNKTFPMLDV 566
S KRL++TFP+L+V
Sbjct: 580 YSFKRLHRTFPLLNV 592
BLAST of HG10007827 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 464.9 bits (1195), Expect = 9.3e-131
Identity = 223/489 (45.60%), Postives = 322/489 (65.85%), Query Frame = 0
Query: 69 LNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYGD 128
L + R G+ E FLE++V G PD++ CT LI+GF +KA +++EILE G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 129 -PDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFE 188
PDV +YN MISG+ KA +I +A V DRM + SPDVVTYN ++ SLC GKL+ A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 228
Query: 189 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGIC 248
V+D +L+ C P VITYTILIEAT + + A++L DE+ RG PD+ TYN ++ GIC
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288
Query: 249 KEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVV 308
KEG D A++F+ ++ + GC P+ I++NI+LRS + RW D EKL+ DM+ G P+VV
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348
Query: 309 THSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKM 368
T +ILI+ LCR+G + A+++L+ M + G P++ SY+PL+ FCKE ++D AIEYL +M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408
Query: 369 VSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNK 428
VS GC PDIV YNT+L LCK G + A++I +L GC P + +YNT+ L +G
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468
Query: 429 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNIV 488
KA++++ EM K + PD ITY+SL+ L R+G VDEAI + E +P ++FN +
Sbjct: 469 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 528
Query: 489 LLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGV 548
+LG+CK + I+ L+ M+ +GC PNETSY +LIEG+AY G EA+EL N L G+
Sbjct: 529 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 588
Query: 549 ICEDSSKRL 557
+ + S++++
Sbjct: 589 MKKSSAEQV 594
BLAST of HG10007827 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 310.5 bits (794), Expect = 2.9e-84
Identity = 173/487 (35.52%), Postives = 278/487 (57.08%), Query Frame = 0
Query: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG-DPDVYSYNAM 138
++S LES+V+ G KP+V T+L+ + LKKA+RV+E++ + G PD +Y +
Sbjct: 88 SDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 139 ISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGC 198
++ K + A Q+ ++M G+ + VTYN ++ LC G L + + ++ L++ G
Sbjct: 148 VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 199 KPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEGMEDRAVE 258
P+ TY+ L+EA E +EA++L DE++ +G P+L +YN ++ G CKEG D A+
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 259 FVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHSILISSLC 318
REL A+G + +SYNILLR RWE+ L+ +M P+VVT++ILI+SL
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 319 REGRVREAVNVLKVMKEKG--LTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSDGCLPD 378
GR +A+ VLK M + A SY+P+I+ CKEG++DL ++ L +M+ C P+
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 379 IVNYNTILATLCKFGS-ADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKALEMI 438
YN I +LC+ S A I + L Y ++ ++L GN A +++
Sbjct: 388 EGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 447
Query: 439 SEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM-EATSFQPTVISFNIVLLGMCK 498
EM R G DPD TY++LI LC +G+ A+ +L M E+ + +PTV +FN ++LG+CK
Sbjct: 448 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 507
Query: 499 VHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICEDSS 558
+ R +E+ MVEK +PNET+Y +L+EGIA+ A E+ + L VI +++
Sbjct: 508 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 567
Query: 559 KRLNKTF 561
R+ F
Sbjct: 568 DRIVMQF 573
BLAST of HG10007827 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 285.8 bits (730), Expect = 7.8e-77
Identity = 152/523 (29.06%), Postives = 265/523 (50.67%), Query Frame = 0
Query: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG 127
L+ CRA + ++ LE + S G PD T +++G+ +L A+R+ E + +G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 128 -------------------------------------DPDVYSYNAMISGFSKANQIESA 187
PD Y++N +++G KA ++ A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 188 NQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 247
++ D M G+ PDV TYN +I LC G+++ A EV+D+++ C P+ +TY LI
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 248 TILEGRINEALELFDELLSRGLRPDLYTYNAIIRGICKEGMEDRAVEFVRELSARGCNPD 307
E ++ EA EL L S+G+ PD+ T+N++I+G+C A+E E+ ++GC PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 308 AISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNVVTHSILISSLCREGRVREAVNVLK 367
+YN+L+ S +K + ++ ++K M LSGC +V+T++ LI C+ + REA +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 368 VMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHKMVSDGCLPDIVNYNTILATLCKFG 427
M+ G++ ++ +Y+ LI CK R++ A + + +M+ +G PD YN++L C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 428 SADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGNKIKALEMISEMIRKGIDPDEITYN 487
A DI + + GC P++ +Y T+ S L +G A +++ + KGI+ YN
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 488 SLISCLCRDGLVDEAIGLLVDM-EATSFQPTVISFNIVLLGMCK-VHRVFEGIELLITMV 547
+I L R EAI L +M E P +S+ IV G+C + E ++ L+ ++
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 548 EKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLGVICED 552
EKG +P +S +L EG+ ++L N + + E+
Sbjct: 675 EKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEE 717
BLAST of HG10007827 vs. TAIR 10
Match:
AT1G62670.1 (rna processing factor 2 )
HSP 1 Score: 279.6 bits (714), Expect = 5.6e-75
Identity = 141/480 (29.38%), Postives = 258/480 (53.75%), Query Frame = 0
Query: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAVRVMEILETYG 127
L+N CR + +L L ++ G++P++V + L+ G+ +S+ + +AV +++ + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 128 -DPDVYSYNAMISGFSKANQIESANQVFDRMRIRGFSPDVVTYNIMIGSLCSRGKLELAF 187
P+ ++N +I G N+ A + DRM +G PD+VTY +++ LC RG +LAF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 188 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELLSRGLRPDLYTYNAIIRGI 247
+++++ + +P V+ Y +I+ +++AL LF E+ ++G+RP++ TY+++I +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 248 CKEGMEDRAVEFVRELSARGCNPDAISYNILLRSFLNKSRWEDGEKLMKDMVLSGCEPNV 307
C G A + ++ R NPD +++ L+ +F+ + + + EKL +MV +P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 308 VTHSILISSLCREGRVREAVNVLKVMKEKGLTPDAYSYDPLISAFCKEGRLDLAIEYLHK 367
VT+S LI+ C R+ EA + + M K PD +Y+ LI FCK R++ +E +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 368 MVSDGCLPDIVNYNTILATLCKFGSADLALDIFEKLDEVGCPPNVSSYNTMFSALWSSGN 427
M G + + V YN ++ L + G D+A +IF+++ G PPN+ +YNT+ L +G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 428 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATSFQPTVISFNI 487
KA+ + + R ++P TYN +I +C+ G V++ L ++ +P V+++N
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 488 VLLGMCKVHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRPEAMELANSLYRLG 547
++ G C+ E L M E G LPN Y LI G R + EL + G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880759.1 | 0.0e+00 | 96.04 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Benincasa ... | [more] |
KAA0038402.1 | 0.0e+00 | 95.35 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
TYJ96990.1 | 0.0e+00 | 95.35 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008443759.1 | 0.0e+00 | 95.35 | PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic ... | [more] |
XP_004142590.1 | 0.0e+00 | 93.29 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Cucumis sa... | [more] |
Match Name | E-value | Identity | Description | |
Q9SR00 | 7.5e-210 | 63.42 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q3EDF8 | 1.3e-129 | 45.60 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
A3KPF8 | 4.1e-83 | 35.52 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9LFF1 | 1.1e-75 | 29.06 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9SXD1 | 7.8e-74 | 29.38 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T4J1 | 0.0e+00 | 95.35 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BAX6 | 0.0e+00 | 95.35 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B9K3 | 0.0e+00 | 95.35 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Cucumis ... | [more] |
A0A0A0M3C6 | 0.0e+00 | 93.29 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666460 PE=4 SV=1 | [more] |
A0A6J1H8M7 | 3.0e-302 | 91.07 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT3G04760.1 | 5.3e-211 | 63.42 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G09900.1 | 9.3e-131 | 45.60 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G79080.1 | 2.9e-84 | 35.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 7.8e-77 | 29.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G62670.1 | 5.6e-75 | 29.38 | rna processing factor 2 | [more] |