Homology
BLAST of HG10007792 vs. NCBI nr
Match:
XP_038879303.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879304.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879305.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879306.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_038879307.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida])
HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 693/764 (90.71%), Postives = 720/764 (94.24%), Query Frame = 0
Query: 1 MRATKPSLPFPNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVANQ 60
MRA PS PFPNQTFP+LL NPNPN IPDSSH QPQ+PPLDL SSLSSLKNLI+VANQ
Sbjct: 1 MRAMNPS-PFPNQTFPSLLPSNPNPNFHIPDSSHFQPQNPPLDLFSSLSSLKNLINVANQ 60
Query: 61 TLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQLL 120
TLQSLSYLTLTP PSHY N+S L+QCHFDRRH VP HSLFRHSLICPSASLP IDPTQLL
Sbjct: 61 TLQSLSYLTLTPTPSHYGNDSYLVQCHFDRRHRVPPHSLFRHSLICPSASLPRIDPTQLL 120
Query: 121 QSLLYPQT-LHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSL YPQT LHSSRQLVNEKRF QMLPDSDADLCFSLND+TDA+SNFFY+DCP VVA SN
Sbjct: 121 QSLHYPQTLLHSSRQLVNEKRFSQMLPDSDADLCFSLNDFTDATSNFFYLDCPSVVASSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDE+SKVFTLPR+LAV CANF+GNDHPEMKSTLKG+RILPSDLWVLRSEVE W++YPNMY
Sbjct: 181 LDEISKVFTLPRILAVHCANFIGNDHPEMKSTLKGLRILPSDLWVLRSEVEAWDEYPNMY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE AMDSHLMTWIIANSPRYGAV+DVAMRDH+FLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMAMDSHLMTWIIANSPRYGAVLDVAMRDHVFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
QIALENGNGMEGGSGNSCF CPILIQVLMWLASQLSVLYGETNGK+FAI+M RQCILDA
Sbjct: 301 QIALENGNGMEGGSGNSCFNCPILIQVLMWLASQLSVLYGETNGKFFAIHMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LRLLLLPSEQKP ESLTLGEGS NLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCR
Sbjct: 361 LRLLLLPSEQKPVESLTLGEGSHNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRE 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIK LRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKTLRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQFHNED NKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQFHNEDTNKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERG KS QPTDHNITRNIIADGHTKGSNDS+GD R SSSHSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGTKSEQPTDHNITRNIIADGHTKGSNDSHGDARLSSSHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQSNYDS YS SEKP K H GH GSPEDERKSS+KDKYDRDH+HRFSDRSSSPSQSH+WK
Sbjct: 601 KQSNYDSGYSFSEKPQKDHYGHNGSPEDERKSSNKDKYDRDHHHRFSDRSSSPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYPSD DDEV AETRHHETRKLSSSSSN+HGFRSSSSSRSGGGSSARKDGHKLRASDSRK
Sbjct: 661 RYPSDRDDEVLAETRHHETRKLSSSSSNYHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
RN+ADNHSSEHLVFNSFNDRYTPSECHD+LEDDYST SRLS+SR
Sbjct: 721 RNMADNHSSEHLVFNSFNDRYTPSECHDKLEDDYSTASRLSRSR 763
BLAST of HG10007792 vs. NCBI nr
Match:
TYJ97003.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 648/764 (84.82%), Postives = 686/764 (89.79%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH HYGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKSR
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of HG10007792 vs. NCBI nr
Match:
XP_008443753.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo])
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 647/763 (84.80%), Postives = 685/763 (89.78%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH HYGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKS 761
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKS
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755
BLAST of HG10007792 vs. NCBI nr
Match:
KAA0038392.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 1235.7 bits (3196), Expect = 0.0e+00
Identity = 647/764 (84.69%), Postives = 685/764 (89.66%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH YGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKSR
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of HG10007792 vs. NCBI nr
Match:
XP_031743015.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus] >KAE8653591.1 hypothetical protein Csa_007460 [Cucumis sativus])
HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 648/764 (84.82%), Postives = 681/764 (89.14%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF P QTFPN L PNPNPN I DSSHSQ QHPPLDLSSS SSL NLIH AN
Sbjct: 1 MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTLQSLSYLT PS +AN+S L+ CHFDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLQSLSYLT----PSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSSRQLVNE RF Q+LPDSDADLCFSL DY+DA+SNFFYVDCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW LRSEVE+WNDYP+ Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE A++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEG SGNSCFKCPILIQVLMWLASQLSVLYGETNG +FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LLLL SEQK ESLTLGEGS +LE SCSDTQSVK+NELDQKVVNNG+ VNC V
Sbjct: 361 SGLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYN I QRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ HNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIG FVKGPEERGIKS QP+DHN+T+NI AD HT+GSNDSYGD RHSS HSK
Sbjct: 541 MEEIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQSNYDSRY ASEKP K H GHY SPEDERK SSKDKYDRDHYHRF D+SS PSQSH+WK
Sbjct: 601 KQSNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEV AETRHHET+KL+SSSS HG RSSSSSRSGGGSSARK +KLRASDS K
Sbjct: 661 RYPNDRDDEVTAETRHHETKKLTSSSS--HG-RSSSSSRSGGGSSARKVSNKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
N ADNHSSEHLVFNSFNDRYTPS+CHD+LED+YSTVSRLSKSR
Sbjct: 721 MNTADNHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKSR 752
BLAST of HG10007792 vs. ExPASy Swiss-Prot
Match:
Q9M8X2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP48 PE=3 SV=1)
HSP 1 Score: 429.1 bits (1102), Expect = 1.0e-118
Identity = 305/770 (39.61%), Postives = 417/770 (54.16%), Query Frame = 0
Query: 6 PSLPFPNQTFPNLLL----PNPNPNI-----------PDSSHSQPQHPPL-DLSSSLSSL 65
PSLP PNL PN NPN P++ P PP+ +LS +LSSL
Sbjct: 5 PSLPHYQNPNPNLFYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSL 64
Query: 66 KNLIHVANQTLQSLSYLTLTPNPS--HYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSA 125
K+L+ +TL SLS + S N ++C FD H +P +LF HSL CP+
Sbjct: 65 KSLLSECQRTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT 124
Query: 126 SLPCIDPTQLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFY 185
+D LL+S Y TL +L L + D DLC SL+D D SNFFY
Sbjct: 125 ----LDLIHLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFY 184
Query: 186 VDCPGVVALSNLDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTL-KGIRILPSDLWVLRS 245
DCPG V S LD + TLP VL+V+C++FVG+D K L K + +LPSDL +++
Sbjct: 185 RDCPGAVKFSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKN 244
Query: 246 EVEMWNDYPNMYSFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRL 305
E++ W D+P+ YS VL SI+GS+ S L WI+ NS RYG +ID MRDHIFLLFRL
Sbjct: 245 EIDQWRDFPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRL 304
Query: 306 CFMAIYKEALGFQI---ALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGK 365
C + KEA GF++ A + G +S F+CP+ IQVL WLASQL+VLYGE NGK
Sbjct: 305 CLKSAVKEACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGK 364
Query: 366 YFAINMFRQCILDATLRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVV 425
+FA++MF+QCI+++ +++L E ++ + E + D K E
Sbjct: 365 FFALDMFKQCIVESASQVMLFRLEGTRSKCSGVVEDLDDARLRNKDVIMEKPFE-----N 424
Query: 426 NNGNVTGEETVNCRVILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYIS 485
++G G+ + +VI VS+V+AAVAAL+ER +LEEKI+A+R++ T+YQR +E +++
Sbjct: 425 SSGGECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMT 484
Query: 486 QRACEERKRRCNYRPIIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKA 545
+A EER RRC+YRPII+HDG P+Q+ N+D +K KTREELLAEERDYKRRRMSYRGKK
Sbjct: 485 AKADEERNRRCSYRPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKV 544
Query: 546 KRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNII------AD 605
KR+ QV D+IEEY EEI AGGIGCF KG ++S P ++ + D
Sbjct: 545 KRTPRQVLHDMIEEYTEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKESDFGYSIPSTD 604
Query: 606 GHTKGSN----DSYGDGRHSSSHSKKQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSK 665
KG N + D R +S K+ YDS S ++ H+ + H +D+ + K
Sbjct: 605 KQWKGENRADIEYPIDNRQNSDKVKRHDEYDSGSSQRQQSHRSY-KHSDRRDDKLRDRRK 664
Query: 666 DKYDRDHYHRFSDRSSSPSQSHRWKRYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSS 725
DK+ +DR DDE RH S ++ +RSS
Sbjct: 665 DKH--------NDRR----------------DDEFTRTKRH------SIEGESYQNYRSS 710
Query: 726 SSSRSGGGSSARKDGHKLRASDSRKRNLADNHSSEHLVFNSFNDRYTPSE 743
S + R D + R+ R +NL F DRY P+E
Sbjct: 725 REKSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 710
BLAST of HG10007792 vs. ExPASy TrEMBL
Match:
A0A5D3BCH1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00550 PE=4 SV=1)
HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 648/764 (84.82%), Postives = 686/764 (89.79%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH HYGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKSR
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of HG10007792 vs. ExPASy TrEMBL
Match:
A0A1S3B9I2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487266 PE=4 SV=1)
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 647/763 (84.80%), Postives = 685/763 (89.78%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH HYGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKS 761
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKS
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755
BLAST of HG10007792 vs. ExPASy TrEMBL
Match:
A0A5A7T4I0 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002790 PE=4 SV=1)
HSP 1 Score: 1235.7 bits (3196), Expect = 0.0e+00
Identity = 647/764 (84.69%), Postives = 685/764 (89.66%), Query Frame = 0
Query: 1 MRATKPSLPF-PNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVAN 60
MRA PSLPF PNQTFP+ L PNPNPN I DSSHS+ QHP LDL SS SSL LIH+AN
Sbjct: 1 MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60
Query: 61 QTLQSLSYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQL 120
QTL+SLSYLT PS +AN+S L+ C+FDRRH VP HSLFRHSL+CPSASL IDPTQL
Sbjct: 61 QTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 120
Query: 121 LQSLLYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSN 180
QSLLYPQTLHSS QLVNE RF Q+LPDSDADLCFSL DYTDA+SNFFY DCPGVVALSN
Sbjct: 121 FQSLLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 180
Query: 181 LDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMY 240
LDEMSKVFTLPRVLAV CANFVGNDH EM STL GIRILPSDLW+LRSEVE+WNDYPN Y
Sbjct: 181 LDEMSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKY 240
Query: 241 SFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGF 300
SFVVLRSILGSE ++SHLMTWII NSPRYG VIDVA+RDHIFLLFRLCFMAIYKEALGF
Sbjct: 241 SFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGF 300
Query: 301 QIALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDAT 360
Q+ALE GNGMEGGS NSCFKCPILIQVLMWLASQLSVLYGETNGK+FA+NM RQCILDA
Sbjct: 301 QVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAA 360
Query: 361 LRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRV 420
LR LLLPSEQK E LTLG+G +LE SCSD QSVK+NELDQKVVNNGNVTG ETVNCRV
Sbjct: 361 LR-LLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRV 420
Query: 421 ILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
ILVSQVAAAVAALHERF+LEEKIKALRF+HLQTKYQRVSEYNYISQRACEERKRRCNYRP
Sbjct: 421 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 480
Query: 481 IIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
IIEHDGLPKQQ +NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY
Sbjct: 481 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 540
Query: 541 MEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGRHSSSHSK 600
MEEIMKAGGIGCFVKGPEERGIKS QP+DHNITRNI+AD HT+GSND GD RHSS HSK
Sbjct: 541 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 600
Query: 601 KQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWK 660
KQS +DSRY S+KP KGH YGSPEDERK S KDKYDRDHYHRFSD+SS PSQSH+WK
Sbjct: 601 KQSFHDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 660
Query: 661 RYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRK 720
RYP+D DDEVPAETRHHET+KL+SSSS HG RSSSSSRSG GSSARKD HKLRASDS K
Sbjct: 661 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 720
Query: 721 RNLADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSRLSKSR 762
RN ADNHSSEHLV NSF+DRYTPSECHD+LED+YSTVSRLSKSR
Sbjct: 721 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSR 756
BLAST of HG10007792 vs. ExPASy TrEMBL
Match:
A0A6J1KPX5 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497626 PE=4 SV=1)
HSP 1 Score: 1146.0 bits (2963), Expect = 0.0e+00
Identity = 605/756 (80.03%), Postives = 658/756 (87.04%), Query Frame = 0
Query: 6 PSLPFPNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVANQTLQSL 65
PSLP N TFP NPNPN +PDS + PPLDLSSSLSSL+NLIHVANQTLQSL
Sbjct: 3 PSLPSSNLTFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTLQSL 62
Query: 66 SYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQLLQSLLY 125
SYLTL PS ++S +QC+FDRRH VP HSLF HSL+CPSA P IDPTQLLQSLLY
Sbjct: 63 SYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLY 122
Query: 126 PQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSNLDEMSK 185
P+TL SSR+LVNEKRF Q +PDSDADLCFSLNDY+D SSNFFY+DCPGVVALSN DEMSK
Sbjct: 123 PRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDEMSK 182
Query: 186 VFTLPRVLAVQCANFVGND--HPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMYSFVV 245
VFTLPRVLAV+CANFV +D EMKS+LKGIR+LPSDLW LR EVEMWNDYP++YS +V
Sbjct: 183 VFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIV 242
Query: 246 LRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGFQIAL 305
+RSILGSE A+D+ L TWIIANSPRYG +IDVAMRDHIFLLFRLCFMAI KEA+GFQIAL
Sbjct: 243 IRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIAL 302
Query: 306 ENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDATLRLL 365
ENGNGMEGGSGN FKCPIL+QVL+WLASQLSVLYGE +GK+FAINM RQ IL A L
Sbjct: 303 ENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLS 362
Query: 366 LLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRVILVS 425
LLP EQK ES TL EGS NL +SCSDTQSV L +LD KV+NN VTGEETVNCRVI VS
Sbjct: 363 LLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVIFVS 422
Query: 426 QVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 485
QVAAAVAALHERF+LEEKIKALRFSHLQTK+Q VSE+NYISQRACEERKRRC+YRPIIEH
Sbjct: 423 QVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEH 482
Query: 486 DGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 545
DGLPKQQ H+ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+EI
Sbjct: 483 DGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEI 542
Query: 546 MKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGR-HSSSHSKKQS 605
MKAGGIG FVKG EERGIKS QPTDH ITR+ IADGHTKGSN SYG+ R HSSSHS+KQS
Sbjct: 543 MKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRKQS 602
Query: 606 NYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWKRYP 665
NYD+RYSASEKP KG CGHYGSPEDERK SKDKYDR+HYHRFS+RSSSPSQSH+WKRYP
Sbjct: 603 NYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWKRYP 662
Query: 666 SDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRKRNL 725
SD DDE PAETRHH++R LSSSSSN+HGFRSSSSSRSGG SSARKD HKLRASDS KRN
Sbjct: 663 SDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWKRNT 722
Query: 726 ADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSR 757
ADNHSS+ LV NSFNDRYTPS+CHDQLEDD+S R
Sbjct: 723 ADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRR 753
BLAST of HG10007792 vs. ExPASy TrEMBL
Match:
A0A6J1KU07 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497626 PE=4 SV=1)
HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 605/757 (79.92%), Postives = 658/757 (86.92%), Query Frame = 0
Query: 6 PSLPFPNQTFPNLLLPNPNPN--IPDSSHSQPQHPPLDLSSSLSSLKNLIHVANQTLQSL 65
PSLP N TFP NPNPN +PDS + PPLDLSSSLSSL+NLIHVANQTLQSL
Sbjct: 3 PSLPSSNLTFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTLQSL 62
Query: 66 SYLTLTPNPSHYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSASLPCIDPTQLLQSLLY 125
SYLTL PS ++S +QC+FDRRH VP HSLF HSL+CPSA P IDPTQLLQSLLY
Sbjct: 63 SYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLY 122
Query: 126 PQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFYVDCPGVVALSNLDEMSK 185
P+TL SSR+LVNEKRF Q +PDSDADLCFSLNDY+D SSNFFY+DCPGVVALSN DEMSK
Sbjct: 123 PRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDEMSK 182
Query: 186 VFTLPRVLAVQCANFVGND--HPEMKSTLKGIRILPSDLWVLRSEVEMWNDYPNMYSFVV 245
VFTLPRVLAV+CANFV +D EMKS+LKGIR+LPSDLW LR EVEMWNDYP++YS +V
Sbjct: 183 VFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIV 242
Query: 246 LRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRLCFMAIYKEALGFQIAL 305
+RSILGSE A+D+ L TWIIANSPRYG +IDVAMRDHIFLLFRLCFMAI KEA+GFQIAL
Sbjct: 243 IRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIAL 302
Query: 306 ENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGKYFAINMFRQCILDATLRLL 365
ENGNGMEGGSGN FKCPIL+QVL+WLASQLSVLYGE +GK+FAINM RQ IL A L
Sbjct: 303 ENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLS 362
Query: 366 LLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVVNNGNVTGEETVNCRVILVS 425
LLP EQK ES TL EGS NL +SCSDTQSV L +LD KV+NN VTGEETVNCRVI VS
Sbjct: 363 LLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVIFVS 422
Query: 426 QVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 485
QVAAAVAALHERF+LEEKIKALRFSHLQTK+Q VSE+NYISQRACEERKRRC+YRPIIEH
Sbjct: 423 QVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEH 482
Query: 486 DGLPKQQFHNE-DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEE 545
DGLPKQQ H+E D +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM+E
Sbjct: 483 DGLPKQQSHDEQDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDE 542
Query: 546 IMKAGGIGCFVKGPEERGIKSAQPTDHNITRNIIADGHTKGSNDSYGDGR-HSSSHSKKQ 605
IMKAGGIG FVKG EERGIKS QPTDH ITR+ IADGHTKGSN SYG+ R HSSSHS+KQ
Sbjct: 543 IMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRKQ 602
Query: 606 SNYDSRYSASEKPHKGHCGHYGSPEDERKSSSKDKYDRDHYHRFSDRSSSPSQSHRWKRY 665
SNYD+RYSASEKP KG CGHYGSPEDERK SKDKYDR+HYHRFS+RSSSPSQSH+WKRY
Sbjct: 603 SNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWKRY 662
Query: 666 PSDPDDEVPAETRHHETRKLSSSSSNFHGFRSSSSSRSGGGSSARKDGHKLRASDSRKRN 725
PSD DDE PAETRHH++R LSSSSSN+HGFRSSSSSRSGG SSARKD HKLRASDS KRN
Sbjct: 663 PSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWKRN 722
Query: 726 LADNHSSEHLVFNSFNDRYTPSECHDQLEDDYSTVSR 757
ADNHSS+ LV NSFNDRYTPS+CHDQLEDD+S R
Sbjct: 723 TADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRR 754
BLAST of HG10007792 vs. TAIR 10
Match:
AT3G04160.1 (unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0; Bacteria - 64; Metazoa - 693; Fungi - 201; Plants - 207; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). )
HSP 1 Score: 429.1 bits (1102), Expect = 7.4e-120
Identity = 305/770 (39.61%), Postives = 417/770 (54.16%), Query Frame = 0
Query: 6 PSLPFPNQTFPNLLL----PNPNPNI-----------PDSSHSQPQHPPL-DLSSSLSSL 65
PSLP PNL PN NPN P++ P PP+ +LS +LSSL
Sbjct: 5 PSLPHYQNPNPNLFYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSL 64
Query: 66 KNLIHVANQTLQSLSYLTLTPNPS--HYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSA 125
K+L+ +TL SLS + S N ++C FD H +P +LF HSL CP+
Sbjct: 65 KSLLSECQRTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT 124
Query: 126 SLPCIDPTQLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFY 185
+D LL+S Y TL +L L + D DLC SL+D D SNFFY
Sbjct: 125 ----LDLIHLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFY 184
Query: 186 VDCPGVVALSNLDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTL-KGIRILPSDLWVLRS 245
DCPG V S LD + TLP VL+V+C++FVG+D K L K + +LPSDL +++
Sbjct: 185 RDCPGAVKFSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKN 244
Query: 246 EVEMWNDYPNMYSFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRL 305
E++ W D+P+ YS VL SI+GS+ S L WI+ NS RYG +ID MRDHIFLLFRL
Sbjct: 245 EIDQWRDFPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRL 304
Query: 306 CFMAIYKEALGFQI---ALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGK 365
C + KEA GF++ A + G +S F+CP+ IQVL WLASQL+VLYGE NGK
Sbjct: 305 CLKSAVKEACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGK 364
Query: 366 YFAINMFRQCILDATLRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVV 425
+FA++MF+QCI+++ +++L E ++ + E + D K E
Sbjct: 365 FFALDMFKQCIVESASQVMLFRLEGTRSKCSGVVEDLDDARLRNKDVIMEKPFE-----N 424
Query: 426 NNGNVTGEETVNCRVILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYIS 485
++G G+ + +VI VS+V+AAVAAL+ER +LEEKI+A+R++ T+YQR +E +++
Sbjct: 425 SSGGECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMT 484
Query: 486 QRACEERKRRCNYRPIIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGKKA 545
+A EER RRC+YRPII+HDG P+Q+ N+D +K KTREELLAEERDYKRRRMSYRGKK
Sbjct: 485 AKADEERNRRCSYRPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKV 544
Query: 546 KRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNII------AD 605
KR+ QV D+IEEY EEI AGGIGCF KG ++S P ++ + D
Sbjct: 545 KRTPRQVLHDMIEEYTEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKESDFGYSIPSTD 604
Query: 606 GHTKGSN----DSYGDGRHSSSHSKKQSNYDSRYSASEKPHKGHCGHYGSPEDERKSSSK 665
KG N + D R +S K+ YDS S ++ H+ + H +D+ + K
Sbjct: 605 KQWKGENRADIEYPIDNRQNSDKVKRHDEYDSGSSQRQQSHRSY-KHSDRRDDKLRDRRK 664
Query: 666 DKYDRDHYHRFSDRSSSPSQSHRWKRYPSDPDDEVPAETRHHETRKLSSSSSNFHGFRSS 725
DK+ +DR DDE RH S ++ +RSS
Sbjct: 665 DKH--------NDRR----------------DDEFTRTKRH------SIEGESYQNYRSS 710
Query: 726 SSSRSGGGSSARKDGHKLRASDSRKRNLADNHSSEHLVFNSFNDRYTPSE 743
S + R D + R+ R +NL F DRY P+E
Sbjct: 725 REKSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 710
BLAST of HG10007792 vs. TAIR 10
Match:
AT3G04160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. )
HSP 1 Score: 417.5 bits (1072), Expect = 2.2e-116
Identity = 303/772 (39.25%), Postives = 413/772 (53.50%), Query Frame = 0
Query: 6 PSLPFPNQTFPNLLL----PNPNPNI-----------PDSSHSQPQHPPL-DLSSSLSSL 65
PSLP PNL PN NPN P++ P PP+ +LS +LSSL
Sbjct: 5 PSLPHYQNPNPNLFYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSL 64
Query: 66 KNLIHVANQTLQSLSYLTLTPNPS--HYANNSDLIQCHFDRRHHVPAHSLFRHSLICPSA 125
K+L+ +TL SLS + S N ++C FD H +P +LF HSL CP+
Sbjct: 65 KSLLSECQRTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT 124
Query: 126 SLPCIDPTQLLQSL-LYPQTLHSSRQLVNEKRFPQMLPDSDADLCFSLNDYTDASSNFFY 185
+D LL+S Y TL +L L + D DLC SL+D D SNFFY
Sbjct: 125 ----LDLIHLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFY 184
Query: 186 VDCPGVVALSNLDEMSKVFTLPRVLAVQCANFVGNDHPEMKSTL-KGIRILPSDLWVLRS 245
DCPG V S LD + TLP VL+V+C++FVG+D K L K + +LPSDL +++
Sbjct: 185 RDCPGAVKFSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKN 244
Query: 246 EVEMWNDYPNMYSFVVLRSILGSETAMDSHLMTWIIANSPRYGAVIDVAMRDHIFLLFRL 305
E++ W D+P+ YS VL SI+GS+ S L WI+ NS RYG +ID MRDHIFLLFRL
Sbjct: 245 EIDQWRDFPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRL 304
Query: 306 CFMAIYKEALGFQI---ALENGNGMEGGSGNSCFKCPILIQVLMWLASQLSVLYGETNGK 365
C + KEA GF++ A + G +S F+CP+ IQVL WLASQL+VLYGE NGK
Sbjct: 305 CLKSAVKEACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGK 364
Query: 366 YFAINMFRQCILDATLRLLLLPSEQKPAESLTLGEGSQNLETSCSDTQSVKLNELDQKVV 425
+FA++MF+QCI+++ +++L E ++ + E + D K E
Sbjct: 365 FFALDMFKQCIVESASQVMLFRLEGTRSKCSGVVEDLDDARLRNKDVIMEKPFE-----N 424
Query: 426 NNGNVTGEETVNCRVILVSQVAAAVAALHERFILEEKIKALRFSHLQTKYQRVSEYNYIS 485
++G G+ + +VI VS+V+AAVAAL+ER +LEEKI+A+R++ T+YQR+ ++S
Sbjct: 425 SSGGECGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRIISCLHLS 484
Query: 486 --QRACEERKRRCNYRPIIEHDGLPKQQFHNEDANKTKTREELLAEERDYKRRRMSYRGK 545
ER RRC+YRPII+HDG P+Q+ N+D +K KTREELLAEERDYKRRRMSYRGK
Sbjct: 485 LIPHDVSERNRRCSYRPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGK 544
Query: 546 KAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSAQPTDHNITRNII------ 605
K KR+ QV D+IEEY EEI AGGIGCF KG ++S P ++ +
Sbjct: 545 KVKRTPRQVLHDMIEEYTEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKESDFGYSIPS 604
Query: 606 ADGHTKGSN----DSYGDGRHSSSHSKKQSNYDSRYSASEKPHKGHCGHYGSPEDERKSS 665
D KG N + D R +S K+ YDS S ++ H+ + H +D+ +
Sbjct: 605 TDKQWKGENRADIEYPIDNRQNSDKVKRHDEYDSGSSQRQQSHRSY-KHSDRRDDKLRDR 664
Query: 666 SKDKYDRDHYHRFSDRSSSPSQSHRWKRYPSDPDDEVPAETRHHETRKLSSSSSNFHGFR 725
KDK+ +DR DDE RH S ++ +R
Sbjct: 665 RKDKH--------NDRR----------------DDEFTRTKRH------SIEGESYQNYR 712
Query: 726 SSSSSRSGGGSSARKDGHKLRASDSRKRNLADNHSSEHLVFNSFNDRYTPSE 743
SS S + R D + R+ R +NL F DRY P+E
Sbjct: 725 SSREKSSSDYKTKRDDPYDRRSQQPRNQNL-------------FEDRYIPTE 712
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879303.1 | 0.0e+00 | 90.71 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Benincasa hispida] >XP_0... | [more] |
TYJ97003.1 | 0.0e+00 | 84.82 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa... | [more] |
XP_008443753.1 | 0.0e+00 | 84.80 | PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo] | [more] |
KAA0038392.1 | 0.0e+00 | 84.69 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa... | [more] |
XP_031743015.1 | 0.0e+00 | 84.82 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativ... | [more] |
Match Name | E-value | Identity | Description | |
Q9M8X2 | 1.0e-118 | 39.61 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BCH1 | 0.0e+00 | 84.82 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku... | [more] |
A0A1S3B9I2 | 0.0e+00 | 84.80 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 G... | [more] |
A0A5A7T4I0 | 0.0e+00 | 84.69 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku... | [more] |
A0A6J1KPX5 | 0.0e+00 | 80.03 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita m... | [more] |
A0A6J1KU07 | 0.0e+00 | 79.92 | U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 OS=Cucurbita m... | [more] |
Match Name | E-value | Identity | Description | |
AT3G04160.1 | 7.4e-120 | 39.61 | unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0... | [more] |
AT3G04160.2 | 2.2e-116 | 39.25 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |