HG10007753 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007753
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description23 kDa jasmonate-induced protein-like
LocationChr10: 12065601 .. 12065948 (-)
RNA-Seq ExpressionHG10007753
SyntenyHG10007753
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATGATGGAGAAAAATATGGAAGAACTCGAAATTATGTAGAGAAATTGAAGAAACAATGGAGAATGGGAGATGCTACTATTTGCTTAATTTACAATGCTACTGGTGATACCATAACATTTGTTAGCGAACATAGTTGGCATGGCGATACTGAATCTGGTCCTTACCCAACTGAGATTGCAAATGGTCAATGGCTTGAATTTCTTCATGTCAAAGAAGCTGTAGTATTTGGAGTCTCTATTGGTGCTATTGTATATCGTGGTCAAAATAATGATGGTGTGCATTATGATTGGATGGCAGCATGGTACTCGTGTCCATCTTTAGGAATCAAAATGGTCAGCTAA

mRNA sequence

ATGAAGAATGATGGAGAAAAATATGGAAGAACTCGAAATTATGTAGAGAAATTGAAGAAACAATGGAGAATGGGAGATGCTACTATTTGCTTAATTTACAATGCTACTGGTGATACCATAACATTTGTTAGCGAACATAGTTGGCATGGCGATACTGAATCTGGTCCTTACCCAACTGAGATTGCAAATGGTCAATGGCTTGAATTTCTTCATGTCAAAGAAGCTGTAGTATTTGGAGTCTCTATTGGTGCTATTGTATATCGTGGTCAAAATAATGATGGTGTGCATTATGATTGGATGGCAGCATGGTACTCGTGTCCATCTTTAGGAATCAAAATGGTCAGCTAA

Coding sequence (CDS)

ATGAAGAATGATGGAGAAAAATATGGAAGAACTCGAAATTATGTAGAGAAATTGAAGAAACAATGGAGAATGGGAGATGCTACTATTTGCTTAATTTACAATGCTACTGGTGATACCATAACATTTGTTAGCGAACATAGTTGGCATGGCGATACTGAATCTGGTCCTTACCCAACTGAGATTGCAAATGGTCAATGGCTTGAATTTCTTCATGTCAAAGAAGCTGTAGTATTTGGAGTCTCTATTGGTGCTATTGTATATCGTGGTCAAAATAATGATGGTGTGCATTATGATTGGATGGCAGCATGGTACTCGTGTCCATCTTTAGGAATCAAAATGGTCAGCTAA

Protein sequence

MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTEIANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAWYSCPSLGIKMVS
Homology
BLAST of HG10007753 vs. NCBI nr
Match: XP_008443732.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 5.0e-30
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN   K    R++VEKL+++W  G AT+CLIYNATGDTITFV EHSWHG   SGPYP+E
Sbjct: 38  MKNAQNKDRSARDHVEKLREEWGHGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK AVV   S GA VYRG NN G   DWM AW
Sbjct: 98  IANGQWGAFLHVKTAVVPSGSAGACVYRGLNNYGEVCDWMVAW 140

BLAST of HG10007753 vs. NCBI nr
Match: KAA0038316.1 (23 kDa jasmonate-induced protein-like [Cucumis melo var. makuwa] >TYK19868.1 23 kDa jasmonate-induced protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 5.0e-30
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN   K    R++VEKL+++W  G AT+CLIYNATGDTITFV EHSWHG   SGPYP+E
Sbjct: 38  MKNAQNKDRSARDHVEKLREEWGHGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK AVV   S GA VYRG NN G   DWM AW
Sbjct: 98  IANGQWGAFLHVKTAVVPSGSAGACVYRGLNNYGEVCDWMVAW 140

BLAST of HG10007753 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-28
Identity = 65/103 (63.11%), Postives = 71/103 (68.93%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN  +K    R YVE+LK+QW  G +T+CLIYNATGDTI FV EHSWHG    GPYP E
Sbjct: 38  MKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK +     S  A VYRG NNDGV  DWM AW
Sbjct: 98  IANGQWGGFLHVKTSGTATGSSAACVYRGLNNDGVVCDWMLAW 140

BLAST of HG10007753 vs. NCBI nr
Match: XP_038891763.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 4.7e-28
Identity = 64/103 (62.14%), Postives = 72/103 (69.90%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN  +K    R YVE+LK+QW  G +T+CLIYNATGDTI FV EHSWHG    GPYP E
Sbjct: 38  MKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK +     S  A VYRG NN+G+  DWMAAW
Sbjct: 98  IANGQWGGFLHVKTSGTATGSSAACVYRGLNNNGMICDWMAAW 140

BLAST of HG10007753 vs. NCBI nr
Match: XP_022157071.1 (23 kDa jasmonate-induced protein-like [Momordica charantia] >XP_022157072.1 23 kDa jasmonate-induced protein-like [Momordica charantia])

HSP 1 Score: 134.4 bits (337), Expect = 6.1e-28
Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKNDG K    R YV+ LK++W  G +T+CL YNATGD ITF+ +H+WHG     PYP +
Sbjct: 38  MKNDGGKDKDVRAYVDSLKQKWGTGVSTLCLFYNATGDPITFICDHNWHGHIGPDPYPLK 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK + V   S  A+VYRGQNN+ +H DWMAAW
Sbjct: 98  IANGQWGGFLHVKTSGVATGSSAAVVYRGQNNNDIHCDWMAAW 140

BLAST of HG10007753 vs. ExPASy Swiss-Prot
Match: P32024 (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-17
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           M N G K    + +V+ LK+++  G A  CL+YNATG T+ F   + WHG     PYP++
Sbjct: 37  MINAGGKDVNAQKFVDNLKERYGNGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSD 96

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQ-NNDGVHYDWMAAWYSCPSLG 111
           I NGQW  FLHV  +     S GA+VYR +  +     DW+ +W + P +G
Sbjct: 97  IQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSW-TVPYIG 146

BLAST of HG10007753 vs. ExPASy TrEMBL
Match: A0A5A7T7X1 (23 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00820 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.4e-30
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN   K    R++VEKL+++W  G AT+CLIYNATGDTITFV EHSWHG   SGPYP+E
Sbjct: 38  MKNAQNKDRSARDHVEKLREEWGHGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK AVV   S GA VYRG NN G   DWM AW
Sbjct: 98  IANGQWGAFLHVKTAVVPSGSAGACVYRGLNNYGEVCDWMVAW 140

BLAST of HG10007753 vs. ExPASy TrEMBL
Match: A0A1S3B9I3 (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.4e-30
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN   K    R++VEKL+++W  G AT+CLIYNATGDTITFV EHSWHG   SGPYP+E
Sbjct: 38  MKNAQNKDRSARDHVEKLREEWGHGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK AVV   S GA VYRG NN G   DWM AW
Sbjct: 98  IANGQWGAFLHVKTAVVPSGSAGACVYRGLNNYGEVCDWMVAW 140

BLAST of HG10007753 vs. ExPASy TrEMBL
Match: A0A097BU21 (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-28
Identity = 65/103 (63.11%), Postives = 71/103 (68.93%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN  +K    R YVE+LK+QW  G +T+CLIYNATGDTI FV EHSWHG    GPYP E
Sbjct: 38  MKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK +     S  A VYRG NNDGV  DWM AW
Sbjct: 98  IANGQWGGFLHVKTSGTATGSSAACVYRGLNNDGVVCDWMLAW 140

BLAST of HG10007753 vs. ExPASy TrEMBL
Match: A0A6J1DTL1 (23 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC111023882 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.0e-28
Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKNDG K    R YV+ LK++W  G +T+CL YNATGD ITF+ +H+WHG     PYP +
Sbjct: 38  MKNDGGKDKDVRAYVDSLKQKWGTGVSTLCLFYNATGDPITFICDHNWHGHIGPDPYPLK 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           IANGQW  FLHVK + V   S  A+VYRGQNN+ +H DWMAAW
Sbjct: 98  IANGQWGGFLHVKTSGVATGSSAAVVYRGQNNNDIHCDWMAAW 140

BLAST of HG10007753 vs. ExPASy TrEMBL
Match: A0A0A0M0F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27
Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 0

Query: 1   MKNDGEKYGRTRNYVEKLKKQWRMGDATICLIYNATGDTITFVSEHSWHGDTESGPYPTE 60
           MKN   K    ++YVEKL+++W  G AT+CLIYNATGDTI FV E+SWHG     PYP+E
Sbjct: 38  MKNAQGKDKDAQDYVEKLREEWGSGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSE 97

Query: 61  IANGQWLEFLHVKEAVVFGVSIGAIVYRGQNNDGVHYDWMAAW 104
           I NGQW  FLHVK AVV   S  + VYRGQNN+G   DWM AW
Sbjct: 98  IENGQWGAFLHVKTAVVPSGSAASCVYRGQNNNGQLCDWMVAW 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008443732.15.0e-3066.02PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo][more]
KAA0038316.15.0e-3066.0223 kDa jasmonate-induced protein-like [Cucumis melo var. makuwa] >TYK19868.1 23 ... [more]
AIS71930.12.1e-2863.1123 kDa jasmonate-induced protein [Citrullus lanatus][more]
XP_038891763.14.7e-2862.1423 kDa jasmonate-induced protein-like [Benincasa hispida][more]
XP_022157071.16.1e-2858.2523 kDa jasmonate-induced protein-like [Momordica charantia] >XP_022157072.1 23 k... [more]
Match NameE-valueIdentityDescription
P320245.1e-1739.6423 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7T7X12.4e-3066.0223 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3B9I32.4e-3066.0223 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE... [more]
A0A097BU211.0e-2863.1123 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1[more]
A0A6J1DTL13.0e-2858.2523 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A0A0M0F43.3e-2760.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.270.50coord: 27..114
e-value: 4.2E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR36482:SF5OSJNBA0024J22.15 PROTEINcoord: 1..104
NoneNo IPR availablePANTHERPTHR36482OSJNBA0024J22.15 PROTEINcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007753.1HG10007753.1mRNA