HG10007637 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAAGAGAGTGCTTTGGGATTATGAAGTGACCTTGGGGCAAACAATTAACGTAGACAAATCAACTTTCATGGTTAGCAAGAATGTTTGCCCTTCGAAAGCAAAGATGATTAGTGATGTGTTAGGCATCAAGATCTCTTATAACTTGGGTATGCCTTCTCAATCAGGGAGGAACAAACACAAGATGTTTAAGAAGATTAGAGAAAGGGTTAGCAAGGTGTTGCAACGTTGGAAAGAGAACTTTTTTCAGCTGGGGAAAAAGAGATTCTTATAA ATGGTCAAGAGAGTGCTTTGGGATTATGAAGTGACCTTGGGGCAAACAATTAACGTAGACAAATCAACTTTCATGGTTAGCAAGAATGTTTGCCCTTCGAAAGCAAAGATGATTAGTGATGTGTTAGGCATCAAGATCTCTTATAACTTGGGTATGCCTTCTCAATCAGGGAGGAACAAACACAAGATGTTTAAGAAGATTAGAGAAAGGGTTAGCAAGGTGTTGCAACGTTGGAAAGAGAACTTTTTTCAGCTGGGGAAAAAGAGATTCTTATAA ATGGTCAAGAGAGTGCTTTGGGATTATGAAGTGACCTTGGGGCAAACAATTAACGTAGACAAATCAACTTTCATGGTTAGCAAGAATGTTTGCCCTTCGAAAGCAAAGATGATTAGTGATGTGTTAGGCATCAAGATCTCTTATAACTTGGGTATGCCTTCTCAATCAGGGAGGAACAAACACAAGATGTTTAAGAAGATTAGAGAAAGGGTTAGCAAGGTGTTGCAACGTTGGAAAGAGAACTTTTTTCAGCTGGGGAAAAAGAGATTCTTATAA MVKRVLWDYEVTLGQTINVDKSTFMVSKNVCPSKAKMISDVLGIKISYNLGMPSQSGRNKHKMFKKIRERVSKVLQRWKENFFQLGKKRFL Homology
BLAST of HG10007637 vs. NCBI nr
Match: XP_030487425.1 (uncharacterized protein LOC115704355 [Cannabis sativa]) HSP 1 Score: 67.8 bits (164), Expect = 5.6e-08 Identity = 42/94 (44.68%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of HG10007637 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07 Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of HG10007637 vs. NCBI nr
Match: XP_024199277.1 (uncharacterized protein LOC112202498 [Rosa chinensis]) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of HG10007637 vs. NCBI nr
Match: KAA3477739.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 63.9 bits (154), Expect = 8.1e-07 Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of HG10007637 vs. NCBI nr
Match: EEC66671.1 (hypothetical protein OsI_32959 [Oryza sativa Indica Group]) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of HG10007637 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.0e-08 Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of HG10007637 vs. ExPASy TrEMBL
Match: A0A2N9GDN7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25361 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07 Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 0
BLAST of HG10007637 vs. ExPASy TrEMBL
Match: A0A5B6W7C2 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011604 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of HG10007637 vs. ExPASy TrEMBL
Match: B8BG19 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32959 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.7e-07 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of HG10007637 vs. ExPASy TrEMBL
Match: B9G7V6 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_30951 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|